RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 ANXA13P27216 316 aa15.83■□□□□ 0.12
TRIM28-207ENST00000597136 TEAD2Q15562 447 aa15.83■□□□□ 0.12
TRIM28-207ENST00000597136 GOLGA7BQ2TAP0 167 aa15.83■□□□□ 0.12
TRIM28-207ENST00000597136 DENND5BQ6ZUT9 1274 aa15.83■□□□□ 0.12
TRIM28-207ENST00000597136 GPRIN1Q7Z2K8 1008 aa15.83■□□□□ 0.12
TRIM28-207ENST00000597136 NPAS3Q8IXF0 933 aa15.83■□□□□ 0.12
TRIM28-207ENST00000597136 OLIG1Q8TAK6 271 aa15.83■□□□□ 0.12
TRIM28-207ENST00000597136 ZNF606Q8WXB4 792 aa15.83■□□□□ 0.12
TRIM28-207ENST00000597136 UHRF1Q96T88 793 aaPredicted RBP15.83■□□□□ 0.12
TRIM28-207ENST00000597136 AGPAT1Q99943 283 aa15.83■□□□□ 0.12
TRIM28-207ENST00000597136 DNAI2Q9GZS0 605 aa15.83■□□□□ 0.12
TRIM28-207ENST00000597136 DMAP1Q9NPF5 467 aaPredicted RBP15.83■□□□□ 0.12
TRIM28-207ENST00000597136 LIMD1Q9UGP4 676 aa15.83■□□□□ 0.12
TRIM28-207ENST00000597136 TSPAN16Q9UKR8 245 aa15.83■□□□□ 0.12
TRIM28-207ENST00000597136 SOWAHDA6NJG2 315 aa15.82■□□□□ 0.12
TRIM28-207ENST00000597136 THAP12O43422 761 aa15.82■□□□□ 0.12
TRIM28-207ENST00000597136 NPR3P17342 541 aa15.82■□□□□ 0.12
TRIM28-207ENST00000597136 CHRNB2P17787 502 aa15.82■□□□□ 0.12
TRIM28-207ENST00000597136 CYP4F8P98187 520 aa15.82■□□□□ 0.12
TRIM28-207ENST00000597136 CDR2Q01850 454 aa15.82■□□□□ 0.12
TRIM28-207ENST00000597136 ASTE1Q2TB18 679 aaPredicted RBP15.82■□□□□ 0.12
TRIM28-207ENST00000597136 TAF3Q5VWG9 929 aa15.82■□□□□ 0.12
TRIM28-207ENST00000597136 OTOP3Q7RTS5 596 aa15.82■□□□□ 0.12
TRIM28-207ENST00000597136 ZNF677Q86XU0 584 aa15.82■□□□□ 0.12
TRIM28-207ENST00000597136 GJD3Q8N144 294 aa15.82■□□□□ 0.12
TRIM28-207ENST00000597136 NUP93Q8N1F7 819 aa15.82■□□□□ 0.12
TRIM28-207ENST00000597136 ANKRD52Q8NB46 1076 aa15.82■□□□□ 0.12
TRIM28-207ENST00000597136 MYRFLQ96LU7 910 aa15.82■□□□□ 0.12
TRIM28-207ENST00000597136 ATXN3LQ9H3M9 355 aa15.82■□□□□ 0.12
TRIM28-207ENST00000597136 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.82■□□□□ 0.12
TRIM28-207ENST00000597136 USTQ9Y2C2 406 aa15.82■□□□□ 0.12
TRIM28-207ENST00000597136 NR2E1Q9Y466 385 aa15.82■□□□□ 0.12
TRIM28-207ENST00000597136 TECTAO75443 2155 aa15.81■□□□□ 0.12
TRIM28-207ENST00000597136 ZNF197O14709 1029 aa15.81■□□□□ 0.12
TRIM28-207ENST00000597136 NRDCO43847 1150 aa15.81■□□□□ 0.12
TRIM28-207ENST00000597136 TADA3O75528 432 aa15.81■□□□□ 0.12
TRIM28-207ENST00000597136 MMEP08473 750 aa15.81■□□□□ 0.12
TRIM28-207ENST00000597136 PGFP49763 221 aa15.81■□□□□ 0.12
TRIM28-207ENST00000597136 FMO1Q01740 532 aa15.81■□□□□ 0.12
TRIM28-207ENST00000597136 PDE4CQ08493 712 aa15.81■□□□□ 0.12
TRIM28-207ENST00000597136 CNGA2Q16280 664 aa15.81■□□□□ 0.12
TRIM28-207ENST00000597136 PKDCCQ504Y2 493 aa15.81■□□□□ 0.12
TRIM28-207ENST00000597136 RAD9BQ6WBX8 426 aa15.81■□□□□ 0.12
TRIM28-207ENST00000597136 CCDC170Q8IYT3 715 aa15.81■□□□□ 0.12
TRIM28-207ENST00000597136 TDRD5Q8NAT2 981 aaKnown RBP15.81■□□□□ 0.12
TRIM28-207ENST00000597136 RSAD2Q8WXG1 361 aa15.81■□□□□ 0.12
TRIM28-207ENST00000597136 KHSRPQ92945 711 aaKnown RBP eCLIP15.81■□□□□ 0.12
TRIM28-207ENST00000597136 TRMT2BQ96GJ1 504 aaKnown RBP15.81■□□□□ 0.12
TRIM28-207ENST00000597136 CCDC42Q96M95 316 aa15.81■□□□□ 0.12
TRIM28-207ENST00000597136 RPP25Q9BUL9 199 aaKnown RBP15.81■□□□□ 0.12
TRIM28-207ENST00000597136 COL25A1Q9BXS0 654 aaPredicted RBP15.81■□□□□ 0.12
TRIM28-207ENST00000597136 CHORDC1Q9UHD1 332 aaPredicted RBP15.81■□□□□ 0.12
TRIM28-207ENST00000597136 ADAMTS1Q9UHI8 967 aa15.81■□□□□ 0.12
TRIM28-207ENST00000597136 CDH7Q9ULB5 785 aa15.81■□□□□ 0.12
TRIM28-207ENST00000597136 ARHGAP6O43182 974 aa15.8■□□□□ 0.12
TRIM28-207ENST00000597136 MED7O43513 233 aa15.8■□□□□ 0.12
TRIM28-207ENST00000597136 GABBR2O75899 941 aa15.8■□□□□ 0.12
TRIM28-207ENST00000597136 ASGR2P07307 311 aa15.8■□□□□ 0.12
TRIM28-207ENST00000597136 TNFAIP3P21580 790 aa15.8■□□□□ 0.12
TRIM28-207ENST00000597136 SLC5A3P53794 718 aa15.8■□□□□ 0.12
TRIM28-207ENST00000597136 MTF1Q14872 753 aa15.8■□□□□ 0.12
TRIM28-207ENST00000597136 LCLAT1Q6UWP7 414 aa15.8■□□□□ 0.12
TRIM28-207ENST00000597136 VPS36Q86VN1 386 aa15.8■□□□□ 0.12
TRIM28-207ENST00000597136 LEMD2Q8NC56 503 aa15.8■□□□□ 0.12
TRIM28-207ENST00000597136 SLC30A5Q8TAD4 765 aa15.8■□□□□ 0.12
TRIM28-207ENST00000597136 ACSF2Q96CM8 615 aaPredicted RBP15.8■□□□□ 0.12
TRIM28-207ENST00000597136 TTLL2Q9BWV7 592 aa15.8■□□□□ 0.12
TRIM28-207ENST00000597136 DEF6Q9H4E7 631 aa15.8■□□□□ 0.12
TRIM28-207ENST00000597136 IL37Q9NZH6 218 aa15.8■□□□□ 0.12
TRIM28-207ENST00000597136 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.8■□□□□ 0.12
TRIM28-207ENST00000597136 F5P12259 2224 aa15.8■□□□□ 0.12
TRIM28-207ENST00000597136 A0A087X0T9 212 aa15.79■□□□□ 0.12
TRIM28-207ENST00000597136 DDX3XO00571 662 aaKnown RBP eCLIP15.79■□□□□ 0.12
TRIM28-207ENST00000597136 AKR1B10O60218 316 aa15.79■□□□□ 0.12
TRIM28-207ENST00000597136 MICAL2O94851 1124 aa15.79■□□□□ 0.12
TRIM28-207ENST00000597136 FAM228BP0C875 321 aa15.79■□□□□ 0.12
TRIM28-207ENST00000597136 KIF11P52732 1056 aa15.79■□□□□ 0.12
TRIM28-207ENST00000597136 TAF10Q12962 218 aa15.79■□□□□ 0.12
TRIM28-207ENST00000597136 STILQ15468 1287 aa15.79■□□□□ 0.12
TRIM28-207ENST00000597136 HS1BP3Q53T59 392 aa15.79■□□□□ 0.12
TRIM28-207ENST00000597136 GPR158Q5T848 1215 aa15.79■□□□□ 0.12
TRIM28-207ENST00000597136 TXNDC8Q6A555 127 aa15.79■□□□□ 0.12
TRIM28-207ENST00000597136 PARM1Q6UWI2 310 aa15.79■□□□□ 0.12
TRIM28-207ENST00000597136 RNF135Q8IUD6 432 aa15.79■□□□□ 0.12
TRIM28-207ENST00000597136 ZDHHC14Q8IZN3 488 aa15.79■□□□□ 0.12
TRIM28-207ENST00000597136 FGF14Q92915 247 aa15.79■□□□□ 0.12
TRIM28-207ENST00000597136 CYP2S1Q96SQ9 504 aa15.79■□□□□ 0.12
TRIM28-207ENST00000597136 PCDHB18PQ96TA0 734 aa15.79■□□□□ 0.12
TRIM28-207ENST00000597136 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.79■□□□□ 0.12
TRIM28-207ENST00000597136 SLC46A2Q9BY10 475 aa15.79■□□□□ 0.12
TRIM28-207ENST00000597136 EPS15L1Q9UBC2 864 aa15.79■□□□□ 0.12
TRIM28-207ENST00000597136 PCDHGC3Q9UN70 934 aa15.79■□□□□ 0.12
TRIM28-207ENST00000597136 EPN1Q9Y6I3 576 aaPredicted RBP15.79■□□□□ 0.12
TRIM28-207ENST00000597136 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.79■□□□□ 0.123e-12■□□□□ 10.7
TRIM28-207ENST00000597136 YWHAQP27348 245 aa15.79■□□□□ 0.12
TRIM28-207ENST00000597136 CYLC1P35663 651 aaPredicted RBP15.79■□□□□ 0.12
TRIM28-207ENST00000597136 SLC18A3Q16572 532 aa15.79■□□□□ 0.12
TRIM28-207ENST00000597136 FAM78AQ5JUQ0 283 aa15.79■□□□□ 0.12
TRIM28-207ENST00000597136 DENND1BQ6P3S1 775 aa15.79■□□□□ 0.12
TRIM28-207ENST00000597136 PIGZQ86VD9 579 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms