RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 ANKZF1Q9H8Y5 726 aa15.91■□□□□ 0.14
VRK3-207ENST00000594092 CNGB3Q9NQW8 809 aa15.91■□□□□ 0.14
VRK3-207ENST00000594092 ASNSD1Q9NWL6 643 aa15.91■□□□□ 0.14
VRK3-207ENST00000594092 MTRRQ9UBK8 725 aa15.91■□□□□ 0.14
VRK3-207ENST00000594092 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.91■□□□□ 0.14
VRK3-207ENST00000594092 INSL6Q9Y581 213 aa15.91■□□□□ 0.14
VRK3-207ENST00000594092 SLC4A7Q9Y6M7 1214 aa15.91■□□□□ 0.14
VRK3-207ENST00000594092 LINC00271P0C7V0 271 aa15.91■□□□□ 0.14
VRK3-207ENST00000594092 PYGMP11217 842 aa15.91■□□□□ 0.14
VRK3-207ENST00000594092 DAOAP59103 153 aa15.91■□□□□ 0.14
VRK3-207ENST00000594092 PSMD5Q16401 504 aa15.91■□□□□ 0.14
VRK3-207ENST00000594092 C15orf59Q2T9L4 293 aaPredicted RBP15.91■□□□□ 0.14
VRK3-207ENST00000594092 LRRC38Q5VT99 294 aa15.91■□□□□ 0.14
VRK3-207ENST00000594092 AADACL2Q6P093 401 aa15.91■□□□□ 0.14
VRK3-207ENST00000594092 HERC6Q8IVU3 1022 aa15.91■□□□□ 0.14
VRK3-207ENST00000594092 FIBCD1Q8N539 461 aa15.91■□□□□ 0.14
VRK3-207ENST00000594092 ATAD1Q8NBU5 361 aa15.91■□□□□ 0.14
VRK3-207ENST00000594092 FBXO22Q8NEZ5 403 aa15.91■□□□□ 0.14
VRK3-207ENST00000594092 CFAP57Q96MR6 1250 aa15.91■□□□□ 0.14
VRK3-207ENST00000594092 SLC9A7Q96T83 725 aa15.91■□□□□ 0.14
VRK3-207ENST00000594092 NAP1L3Q99457 506 aaPredicted RBP15.91■□□□□ 0.14
VRK3-207ENST00000594092 LBHD1Q9BQE6 289 aaPredicted RBP15.91■□□□□ 0.14
VRK3-207ENST00000594092 HERC2P3Q9BVR0 1158 aa15.91■□□□□ 0.14
VRK3-207ENST00000594092 PARD6BQ9BYG5 372 aa15.91■□□□□ 0.14
VRK3-207ENST00000594092 RBM12Q9NTZ6 932 aaKnown RBP15.91■□□□□ 0.14
VRK3-207ENST00000594092 TTC7AQ9ULT0 858 aaPredicted RBP15.91■□□□□ 0.14
VRK3-207ENST00000594092 BACE2Q9Y5Z0 518 aa15.91■□□□□ 0.14
VRK3-207ENST00000594092 CDY1Q9Y6F8 540 aa15.91■□□□□ 0.14
VRK3-207ENST00000594092 KIAA1671Q9BY89 1806 aa15.91■□□□□ 0.14
VRK3-207ENST00000594092 MTMR11A4FU01 709 aa15.9■□□□□ 0.14
VRK3-207ENST00000594092 ADAM12O43184 909 aa15.9■□□□□ 0.14
VRK3-207ENST00000594092 HSF2BPO75031 334 aa15.9■□□□□ 0.14
VRK3-207ENST00000594092 VNN2O95498 520 aa15.9■□□□□ 0.14
VRK3-207ENST00000594092 TUBBP07437 444 aa15.9■□□□□ 0.14
VRK3-207ENST00000594092 SDC4P31431 198 aa15.9■□□□□ 0.14
VRK3-207ENST00000594092 GJC1P36383 396 aa15.9■□□□□ 0.14
VRK3-207ENST00000594092 MAGEA11P43364 429 aa15.9■□□□□ 0.14
VRK3-207ENST00000594092 DSG1Q02413 1049 aa15.9■□□□□ 0.14
VRK3-207ENST00000594092 SH3PXD2AQ5TCZ1 1133 aa15.9■□□□□ 0.14
VRK3-207ENST00000594092 SEL1L2Q5TEA6 688 aa15.9■□□□□ 0.14
VRK3-207ENST00000594092 KIAA1841Q6NSI8 718 aa15.9■□□□□ 0.14
VRK3-207ENST00000594092 VSTM1Q6UX27 236 aa15.9■□□□□ 0.14
VRK3-207ENST00000594092 RNF19BQ6ZMZ0 732 aa15.9■□□□□ 0.14
VRK3-207ENST00000594092 DDX53Q86TM3 631 aaKnown RBP15.9■□□□□ 0.14
VRK3-207ENST00000594092 SCN4BQ8IWT1 228 aa15.9■□□□□ 0.14
VRK3-207ENST00000594092 KATNAL2Q8IYT4 538 aa15.9■□□□□ 0.14
VRK3-207ENST00000594092 PHOSPHO2Q8TCD6 241 aa15.9■□□□□ 0.14
VRK3-207ENST00000594092 DPF3Q92784 378 aa15.9■□□□□ 0.14
VRK3-207ENST00000594092 FAM149B1Q96BN6 582 aa15.9■□□□□ 0.14
VRK3-207ENST00000594092 DDX23Q9BUQ8 820 aaKnown RBP15.9■□□□□ 0.14
VRK3-207ENST00000594092 AAASQ9NRG9 546 aa15.9■□□□□ 0.14
VRK3-207ENST00000594092 PATJQ8NI35 1801 aa15.9■□□□□ 0.14
VRK3-207ENST00000594092 C2CD2LO14523 706 aa15.89■□□□□ 0.13
VRK3-207ENST00000594092 TNFRSF10BO14763 440 aa15.89■□□□□ 0.13
VRK3-207ENST00000594092 DAB1O75553 588 aa15.89■□□□□ 0.13
VRK3-207ENST00000594092 RNF8O76064 485 aa15.89■□□□□ 0.13
VRK3-207ENST00000594092 ZBED1O96006 694 aa15.89■□□□□ 0.13
VRK3-207ENST00000594092 GLI1P08151 1106 aa15.89■□□□□ 0.13
VRK3-207ENST00000594092 USP17L7P0C7H9 530 aa15.89■□□□□ 0.13
VRK3-207ENST00000594092 H2AFXP16104 143 aaPredicted RBP15.89■□□□□ 0.13
VRK3-207ENST00000594092 ATP2A2P16615 1042 aaKnown RBP15.89■□□□□ 0.13
VRK3-207ENST00000594092 RPL17P18621 184 aaKnown RBP15.89■□□□□ 0.13
VRK3-207ENST00000594092 PPM1AP35813 382 aa15.89■□□□□ 0.13
VRK3-207ENST00000594092 PTPN9P43378 593 aa15.89■□□□□ 0.13
VRK3-207ENST00000594092 YWHAZP63104 245 aaKnown RBP15.89■□□□□ 0.13
VRK3-207ENST00000594092 RBM10P98175 930 aaKnown RBP15.89■□□□□ 0.13
VRK3-207ENST00000594092 SLC25A11Q02978 314 aaKnown RBP15.89■□□□□ 0.13
VRK3-207ENST00000594092 SMARCB1Q12824 385 aa15.89■□□□□ 0.13
VRK3-207ENST00000594092 RAB6CQ53S08 254 aa15.89■□□□□ 0.13
VRK3-207ENST00000594092 TXNRD3NBQ6F5E7 133 aa15.89■□□□□ 0.13
VRK3-207ENST00000594092 PM20D1Q6GTS8 502 aa15.89■□□□□ 0.13
VRK3-207ENST00000594092 SLC8B1Q6J4K2 584 aa15.89■□□□□ 0.13
VRK3-207ENST00000594092 FBXO38Q6PIJ6 1188 aa15.89■□□□□ 0.13
VRK3-207ENST00000594092 HFE2Q6ZVN8 426 aa15.89■□□□□ 0.13
VRK3-207ENST00000594092 BHLHA9Q7RTU4 235 aa15.89■□□□□ 0.13
VRK3-207ENST00000594092 TTC9BQ8N6N2 239 aa15.89■□□□□ 0.13
VRK3-207ENST00000594092 SPPL2BQ8TCT7 592 aa15.89■□□□□ 0.13
VRK3-207ENST00000594092 CLP1Q92989 425 aaKnown RBP15.89■□□□□ 0.13
VRK3-207ENST00000594092 ABHD8Q96I13 439 aa15.89■□□□□ 0.13
VRK3-207ENST00000594092 C8orf48Q96LL4 319 aa15.89■□□□□ 0.13
VRK3-207ENST00000594092 RAD9AQ99638 391 aa15.89■□□□□ 0.13
VRK3-207ENST00000594092 PLVAPQ9BX97 442 aa15.89■□□□□ 0.13
VRK3-207ENST00000594092 RAB6CQ9H0N0 254 aa15.89■□□□□ 0.13
VRK3-207ENST00000594092 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.89■□□□□ 0.13
VRK3-207ENST00000594092 PCDHB12Q9Y5F1 795 aa15.89■□□□□ 0.13
VRK3-207ENST00000594092 USP3Q9Y6I4 520 aa15.89■□□□□ 0.13
VRK3-207ENST00000594092 LAMA2P24043 3122 aaKnown RBP15.89■□□□□ 0.13
VRK3-207ENST00000594092 TARSL2A2RTX5 802 aaKnown RBP15.89■□□□□ 0.13
VRK3-207ENST00000594092 YJEFN3A6XGL0 299 aa15.89■□□□□ 0.13
VRK3-207ENST00000594092 E7ENQ6 273 aa15.89■□□□□ 0.13
VRK3-207ENST00000594092 SART1O43290 800 aaKnown RBP15.89■□□□□ 0.13
VRK3-207ENST00000594092 FGGP02679 453 aa15.89■□□□□ 0.13
VRK3-207ENST00000594092 IL1R2P27930 398 aa15.89■□□□□ 0.13
VRK3-207ENST00000594092 MIPP30301 263 aa15.89■□□□□ 0.13
VRK3-207ENST00000594092 PCK1P35558 622 aa15.89■□□□□ 0.13
VRK3-207ENST00000594092 GLUD2P49448 558 aa15.89■□□□□ 0.13
VRK3-207ENST00000594092 GPR15P49685 360 aa15.89■□□□□ 0.13
VRK3-207ENST00000594092 SLC5A3P53794 718 aa15.89■□□□□ 0.13
VRK3-207ENST00000594092 ATP11AP98196 1134 aa15.89■□□□□ 0.13
VRK3-207ENST00000594092 CDO1Q16878 200 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms