RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 MICAL2O94851 1124 aa17.21■□□□□ 0.35
LIG1-206ENST00000594067 NPTXRO95502 500 aa17.21■□□□□ 0.35
LIG1-206ENST00000594067 NEFHP12036 1026 aa17.21■□□□□ 0.35
LIG1-206ENST00000594067 INHBEP58166 350 aa17.21■□□□□ 0.35
LIG1-206ENST00000594067 ROR1Q01973 937 aa17.21■□□□□ 0.35
LIG1-206ENST00000594067 ZNF772Q68DY9 489 aaPredicted RBP17.21■□□□□ 0.35
LIG1-206ENST00000594067 BTBD10Q9BSF8 475 aa17.21■□□□□ 0.35
LIG1-206ENST00000594067 ELOVL4Q9GZR5 314 aa17.21■□□□□ 0.35
LIG1-206ENST00000594067 ARL8BQ9NVJ2 186 aa17.21■□□□□ 0.35
LIG1-206ENST00000594067 STOML1Q9UBI4 398 aa17.21■□□□□ 0.35
LIG1-206ENST00000594067 TNS1Q9HBL0 1735 aaKnown RBP17.2■□□□□ 0.34
LIG1-206ENST00000594067 CFAP69A5D8W1 941 aa17.2■□□□□ 0.34
LIG1-206ENST00000594067 M0QYV0 167 aa17.2■□□□□ 0.34
LIG1-206ENST00000594067 NFKBIEO00221 500 aa17.2■□□□□ 0.34
LIG1-206ENST00000594067 NVLO15381 856 aaKnown RBP17.2■□□□□ 0.34
LIG1-206ENST00000594067 GSC2O15499 205 aa17.2■□□□□ 0.34
LIG1-206ENST00000594067 AHCYL1O43865 530 aa17.2■□□□□ 0.34
LIG1-206ENST00000594067 B4GALT4O60513 344 aa17.2■□□□□ 0.34
LIG1-206ENST00000594067 NFICP08651 508 aa17.2■□□□□ 0.34
LIG1-206ENST00000594067 MXD4Q14582 209 aaPredicted RBP17.2■□□□□ 0.34
LIG1-206ENST00000594067 MUM1Q2TAK8 710 aa17.2■□□□□ 0.34
LIG1-206ENST00000594067 FAM102AQ5T9C2 384 aaPredicted RBP17.2■□□□□ 0.34
LIG1-206ENST00000594067 TMEM154Q6P9G4 183 aa17.2■□□□□ 0.34
LIG1-206ENST00000594067 UBA3Q8TBC4 463 aa17.2■□□□□ 0.34
LIG1-206ENST00000594067 KLRG1Q96E93 195 aa17.2■□□□□ 0.34
LIG1-206ENST00000594067 PTCD3Q96EY7 689 aaKnown RBP17.2■□□□□ 0.34
LIG1-206ENST00000594067 TRIM55Q9BYV6 548 aa17.2■□□□□ 0.34
LIG1-206ENST00000594067 BTBD7Q9P203 1132 aa17.2■□□□□ 0.34
LIG1-206ENST00000594067 WDR35Q9P2L0 1181 aa17.2■□□□□ 0.34
LIG1-206ENST00000594067 IKBKGQ9Y6K9 419 aa17.2■□□□□ 0.34
LIG1-206ENST00000594067 IQANK1A0A1B0GTG1 560 aa17.2■□□□□ 0.34
LIG1-206ENST00000594067 PYGBP11216 843 aa17.2■□□□□ 0.34
LIG1-206ENST00000594067 BGNP21810 368 aa17.2■□□□□ 0.34
LIG1-206ENST00000594067 PROZP22891 400 aa17.2■□□□□ 0.34
LIG1-206ENST00000594067 CDH6P55285 790 aa17.2■□□□□ 0.34
LIG1-206ENST00000594067 SESN3P58005 492 aa17.2■□□□□ 0.34
LIG1-206ENST00000594067 MXRA7P84157 204 aa17.2■□□□□ 0.34
LIG1-206ENST00000594067 PTPN11Q06124 597 aaPredicted RBP17.2■□□□□ 0.34
LIG1-206ENST00000594067 TREML2Q5T2D2 321 aa17.2■□□□□ 0.34
LIG1-206ENST00000594067 C1orf228Q6PIY5 440 aa17.2■□□□□ 0.34
LIG1-206ENST00000594067 PRR11Q96HE9 360 aaPredicted RBP17.2■□□□□ 0.34
LIG1-206ENST00000594067 ADPGKQ9BRR6 497 aa17.2■□□□□ 0.34
LIG1-206ENST00000594067 ASCC2Q9H1I8 757 aaPredicted RBP17.2■□□□□ 0.34
LIG1-206ENST00000594067 PTPRHQ9HD43 1115 aa17.2■□□□□ 0.34
LIG1-206ENST00000594067 UTRNP46939 3433 aa17.2■□□□□ 0.34
LIG1-206ENST00000594067 ZBTB42B2RXF5 422 aa17.19■□□□□ 0.34
LIG1-206ENST00000594067 ARIH2O95376 493 aa17.19■□□□□ 0.34
LIG1-206ENST00000594067 INHBAP08476 426 aa17.19■□□□□ 0.34
LIG1-206ENST00000594067 VHLP40337 213 aa17.19■□□□□ 0.34
LIG1-206ENST00000594067 GCLCP48506 637 aaPredicted RBP17.19■□□□□ 0.34
LIG1-206ENST00000594067 ZNF200P98182 395 aaPredicted RBP17.19■□□□□ 0.34
LIG1-206ENST00000594067 ACSBG2Q5FVE4 666 aa17.19■□□□□ 0.34
LIG1-206ENST00000594067 METTL7BQ6UX53 244 aa17.19■□□□□ 0.34
LIG1-206ENST00000594067 TSHZ1Q6ZSZ6 1077 aa17.19■□□□□ 0.34
LIG1-206ENST00000594067 C1orf127Q8N9H9 656 aa17.19■□□□□ 0.34
LIG1-206ENST00000594067 CFAP61Q8NHU2 1237 aa17.19■□□□□ 0.34
LIG1-206ENST00000594067 NRG4Q8WWG1 115 aa17.19■□□□□ 0.34
LIG1-206ENST00000594067 CFAP36Q96G28 342 aa17.19■□□□□ 0.34
LIG1-206ENST00000594067 BCO2Q9BYV7 579 aa17.19■□□□□ 0.34
LIG1-206ENST00000594067 RPF1Q9H9Y2 349 aaKnown RBP17.19■□□□□ 0.34
LIG1-206ENST00000594067 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.19■□□□□ 0.34
LIG1-206ENST00000594067 ASB3Q9Y575 518 aa17.19■□□□□ 0.34
LIG1-206ENST00000594067 C2orf71A6NGG8 1288 aa17.19■□□□□ 0.34
LIG1-206ENST00000594067 H7C0C1 242 aa17.19■□□□□ 0.34
LIG1-206ENST00000594067 FAM155BO75949 473 aa17.19■□□□□ 0.34
LIG1-206ENST00000594067 HAUS5O94927 633 aa17.19■□□□□ 0.34
LIG1-206ENST00000594067 ITGB3P05106 788 aa17.19■□□□□ 0.34
LIG1-206ENST00000594067 ATP5OP48047 213 aa17.19■□□□□ 0.34
LIG1-206ENST00000594067 ARFIP2P53365 341 aa17.19■□□□□ 0.34
LIG1-206ENST00000594067 CDO1Q16878 200 aa17.19■□□□□ 0.34
LIG1-206ENST00000594067 C15orf59Q2T9L4 293 aaPredicted RBP17.19■□□□□ 0.34
LIG1-206ENST00000594067 HSDL1Q3SXM5 330 aa17.19■□□□□ 0.34
LIG1-206ENST00000594067 SNX30Q5VWJ9 437 aa17.19■□□□□ 0.34
LIG1-206ENST00000594067 PRPF39Q86UA1 669 aaKnown RBP17.19■□□□□ 0.34
LIG1-206ENST00000594067 NCAPG2Q86XI2 1143 aa17.19■□□□□ 0.34
LIG1-206ENST00000594067 SLC44A1Q8WWI5 657 aa17.19■□□□□ 0.34
LIG1-206ENST00000594067 FAF2Q96CS3 445 aa17.19■□□□□ 0.34
LIG1-206ENST00000594067 MCRS1Q96EZ8 462 aa17.19■□□□□ 0.34
LIG1-206ENST00000594067 FAM167AQ96KS9 214 aa17.19■□□□□ 0.34
LIG1-206ENST00000594067 C2orf40Q9H1Z8 148 aa17.19■□□□□ 0.34
LIG1-206ENST00000594067 CDT1Q9H211 546 aa17.19■□□□□ 0.34
LIG1-206ENST00000594067 RSAD1Q9HA92 442 aa17.19■□□□□ 0.34
LIG1-206ENST00000594067 FBXO6Q9NRD1 293 aaPredicted RBP17.19■□□□□ 0.34
LIG1-206ENST00000594067 ASNSD1Q9NWL6 643 aa17.19■□□□□ 0.34
LIG1-206ENST00000594067 ACKR2O00590 384 aa17.18■□□□□ 0.34
LIG1-206ENST00000594067 SERPINB3P29508 390 aa17.18■□□□□ 0.34
LIG1-206ENST00000594067 NEK3P51956 506 aa17.18■□□□□ 0.34
LIG1-206ENST00000594067 NOMO1Q15155 1222 aa17.18■□□□□ 0.34
LIG1-206ENST00000594067 DALRD3Q5D0E6 543 aaKnown RBP17.18■□□□□ 0.34
LIG1-206ENST00000594067 UCMAQ8WVF2 138 aa17.18■□□□□ 0.34
LIG1-206ENST00000594067 APOPT1Q96IL0 206 aa17.18■□□□□ 0.34
LIG1-206ENST00000594067 TSC22D3Q99576 134 aa17.18■□□□□ 0.34
LIG1-206ENST00000594067 TMEM120AQ9BXJ8 343 aa17.18■□□□□ 0.34
LIG1-206ENST00000594067 R3HDMLQ9H3Y0 253 aa17.18■□□□□ 0.34
LIG1-206ENST00000594067 MINDY3Q9H8M7 445 aa17.18■□□□□ 0.34
LIG1-206ENST00000594067 KCNK13Q9HB14 408 aa17.18■□□□□ 0.34
LIG1-206ENST00000594067 TEX264Q9Y6I9 313 aa17.18■□□□□ 0.34
LIG1-206ENST00000594067 SMAPO00193 183 aa17.18■□□□□ 0.34
LIG1-206ENST00000594067 SMIM24O75264 130 aa17.18■□□□□ 0.34
LIG1-206ENST00000594067 CSDE1O75534 798 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms