RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 DESI2Q9BSY9 194 aa12.58□□□□□ -0.4
DDX39A-219ENST00000592927 ELOVL4Q9GZR5 314 aa12.58□□□□□ -0.4
DDX39A-219ENST00000592927 PLEKHA4Q9H4M7 779 aa12.58□□□□□ -0.4
DDX39A-219ENST00000592927 CYP4F11Q9HBI6 524 aa12.58□□□□□ -0.4
DDX39A-219ENST00000592927 CRTAC1Q9NQ79 661 aa12.58□□□□□ -0.4
DDX39A-219ENST00000592927 MAN1C1Q9NR34 630 aa12.58□□□□□ -0.4
DDX39A-219ENST00000592927 TMLHEQ9NVH6 421 aa12.58□□□□□ -0.4
DDX39A-219ENST00000592927 DZANK1Q9NVP4 752 aa12.58□□□□□ -0.4
DDX39A-219ENST00000592927 TRMT1Q9NXH9 659 aaKnown RBP12.58□□□□□ -0.4
DDX39A-219ENST00000592927 DLGAP2Q9P1A6 1054 aa12.58□□□□□ -0.4
DDX39A-219ENST00000592927 FBXW11Q9UKB1 542 aa12.58□□□□□ -0.4
DDX39A-219ENST00000592927 CNTN6Q9UQ52 1028 aa12.58□□□□□ -0.4
DDX39A-219ENST00000592927 SIT1Q9Y3P8 196 aa12.58□□□□□ -0.4
DDX39A-219ENST00000592927 PCDHB5Q9Y5E4 795 aa12.58□□□□□ -0.4
DDX39A-219ENST00000592927 TSC2P49815 1807 aa12.58□□□□□ -0.4
DDX39A-219ENST00000592927 MTMR11A4FU01 709 aa12.57□□□□□ -0.4
DDX39A-219ENST00000592927 USP27XA6NNY8 438 aa12.57□□□□□ -0.4
DDX39A-219ENST00000592927 ACO1P21399 889 aaKnown RBP12.57□□□□□ -0.4
DDX39A-219ENST00000592927 TGM1P22735 817 aa12.57□□□□□ -0.4
DDX39A-219ENST00000592927 CLCN1P35523 988 aa12.57□□□□□ -0.4
DDX39A-219ENST00000592927 USP8P40818 1118 aa12.57□□□□□ -0.4
DDX39A-219ENST00000592927 PDE6CP51160 858 aa12.57□□□□□ -0.4
DDX39A-219ENST00000592927 CDR1P51861 262 aa12.57□□□□□ -0.4
DDX39A-219ENST00000592927 VAV2P52735 878 aa12.57□□□□□ -0.4
DDX39A-219ENST00000592927 RAD23BP54727 409 aa12.57□□□□□ -0.4
DDX39A-219ENST00000592927 CYP27A1Q02318 531 aa12.57□□□□□ -0.4
DDX39A-219ENST00000592927 DUSP4Q13115 394 aa12.57□□□□□ -0.4
DDX39A-219ENST00000592927 OTOP3Q7RTS5 596 aa12.57□□□□□ -0.4
DDX39A-219ENST00000592927 TCEAL8Q8IYN2 117 aa12.57□□□□□ -0.4
DDX39A-219ENST00000592927 C17orf53Q8N3J3 647 aaPredicted RBP12.57□□□□□ -0.4
DDX39A-219ENST00000592927 UBR7Q8N806 425 aa12.57□□□□□ -0.4
DDX39A-219ENST00000592927 ATAD1Q8NBU5 361 aa12.57□□□□□ -0.4
DDX39A-219ENST00000592927 ACRBPQ8NEB7 543 aa12.57□□□□□ -0.4
DDX39A-219ENST00000592927 FEZF2Q8TBJ5 459 aa12.57□□□□□ -0.4
DDX39A-219ENST00000592927 SPPL2BQ8TCT7 592 aa12.57□□□□□ -0.4
DDX39A-219ENST00000592927 MYLPFQ96A32 169 aa12.57□□□□□ -0.4
DDX39A-219ENST00000592927 HEXIM2Q96MH2 286 aaKnown RBP12.57□□□□□ -0.4
DDX39A-219ENST00000592927 PKMYT1Q99640 499 aa12.57□□□□□ -0.4
DDX39A-219ENST00000592927 AGPAT1Q99943 283 aa12.57□□□□□ -0.4
DDX39A-219ENST00000592927 LPIN3Q9BQK8 851 aa12.57□□□□□ -0.4
DDX39A-219ENST00000592927 SYT11Q9BT88 431 aa12.57□□□□□ -0.4
DDX39A-219ENST00000592927 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.57□□□□□ -0.4
DDX39A-219ENST00000592927 TSGA10Q9BZW7 698 aa12.57□□□□□ -0.4
DDX39A-219ENST00000592927 ABI2Q9NYB9 513 aaPredicted RBP12.57□□□□□ -0.4
DDX39A-219ENST00000592927 ANGPTL2Q9UKU9 493 aa12.57□□□□□ -0.4
DDX39A-219ENST00000592927 GPR179Q6PRD1 2367 aa12.56□□□□□ -0.4
DDX39A-219ENST00000592927 PJA2O43164 708 aa12.56□□□□□ -0.4
DDX39A-219ENST00000592927 KRT86O43790 486 aa12.56□□□□□ -0.4
DDX39A-219ENST00000592927 SEC24AO95486 1093 aa12.56□□□□□ -0.4
DDX39A-219ENST00000592927 VNN2O95498 520 aa12.56□□□□□ -0.4
DDX39A-219ENST00000592927 C8AP07357 584 aa12.56□□□□□ -0.4
DDX39A-219ENST00000592927 PNMA6AP0CW24 399 aaPredicted RBP12.56□□□□□ -0.4
DDX39A-219ENST00000592927 CD19P15391 556 aa12.56□□□□□ -0.4
DDX39A-219ENST00000592927 TNFAIP3P21580 790 aa12.56□□□□□ -0.4
DDX39A-219ENST00000592927 MAGEA1P43355 309 aa12.56□□□□□ -0.4
DDX39A-219ENST00000592927 TUFMP49411 452 aaKnown RBP12.56□□□□□ -0.4
DDX39A-219ENST00000592927 CCDC142Q17RM4 750 aa12.56□□□□□ -0.4
DDX39A-219ENST00000592927 MGAT5BQ3V5L5 792 aa12.56□□□□□ -0.4
DDX39A-219ENST00000592927 ARHGAP29Q52LW3 1261 aa12.56□□□□□ -0.4
DDX39A-219ENST00000592927 PPM1LQ5SGD2 360 aa12.56□□□□□ -0.4
DDX39A-219ENST00000592927 NYAP1Q6ZVC0 841 aa12.56□□□□□ -0.4
DDX39A-219ENST00000592927 RTL10Q7L3V2 364 aa12.56□□□□□ -0.4
DDX39A-219ENST00000592927 KIAA1328Q86T90 577 aa12.56□□□□□ -0.4
DDX39A-219ENST00000592927 C12orf29Q8N999 325 aa12.56□□□□□ -0.4
DDX39A-219ENST00000592927 SLC4A11Q8NBS3 891 aa12.56□□□□□ -0.4
DDX39A-219ENST00000592927 RBBP8NLQ8NC74 664 aaPredicted RBP12.56□□□□□ -0.4
DDX39A-219ENST00000592927 SLC30A5Q8TAD4 765 aa12.56□□□□□ -0.4
DDX39A-219ENST00000592927 SLC7A14Q8TBB6 771 aa12.56□□□□□ -0.4
DDX39A-219ENST00000592927 EPS8L1Q8TE68 723 aa12.56□□□□□ -0.4
DDX39A-219ENST00000592927 PCED1BQ96HM7 432 aa12.56□□□□□ -0.4
DDX39A-219ENST00000592927 FUBP3Q96I24 572 aaKnown RBP eCLIP12.56□□□□□ -0.4
DDX39A-219ENST00000592927 MED10Q9BTT4 135 aa12.56□□□□□ -0.4
DDX39A-219ENST00000592927 ABCB6Q9NP58 842 aa12.56□□□□□ -0.4
DDX39A-219ENST00000592927 HSFX1Q9UBD0 423 aa12.56□□□□□ -0.4
DDX39A-219ENST00000592927 ADAMTS1Q9UHI8 967 aa12.56□□□□□ -0.4
DDX39A-219ENST00000592927 INTUQ9ULD6 942 aa12.56□□□□□ -0.4
DDX39A-219ENST00000592927 KIAA1257Q9ULG3 409 aa12.56□□□□□ -0.4
DDX39A-219ENST00000592927 SLC27A5Q9Y2P5 690 aa12.56□□□□□ -0.4
DDX39A-219ENST00000592927 REXO2Q9Y3B8 237 aaKnown RBP12.56□□□□□ -0.4
DDX39A-219ENST00000592927 PCDHA13Q9Y5I0 950 aa12.56□□□□□ -0.4
DDX39A-219ENST00000592927 ANKRD11Q6UB99 2663 aaPredicted RBP12.56□□□□□ -0.4
DDX39A-219ENST00000592927 A0A087X0T9 212 aa12.55□□□□□ -0.4
DDX39A-219ENST00000592927 ZNF263O14978 683 aa12.55□□□□□ -0.4
DDX39A-219ENST00000592927 CYP26A1O43174 497 aa12.55□□□□□ -0.4
DDX39A-219ENST00000592927 ZMYND10O75800 440 aa12.55□□□□□ -0.4
DDX39A-219ENST00000592927 PAEPP09466 180 aa12.55□□□□□ -0.4
DDX39A-219ENST00000592927 FAM228BP0C875 321 aa12.55□□□□□ -0.4
DDX39A-219ENST00000592927 CCDC130P13994 396 aa12.55□□□□□ -0.4
DDX39A-219ENST00000592927 GLULP15104 373 aa12.55□□□□□ -0.4
DDX39A-219ENST00000592927 CYP11B1P15538 503 aa12.55□□□□□ -0.4
DDX39A-219ENST00000592927 KCNA4P22459 653 aa12.55□□□□□ -0.4
DDX39A-219ENST00000592927 BDNFP23560 247 aa12.55□□□□□ -0.4
DDX39A-219ENST00000592927 ALDH1A3P47895 512 aa12.55□□□□□ -0.4
DDX39A-219ENST00000592927 ZNF132P52740 706 aa12.55□□□□□ -0.4
DDX39A-219ENST00000592927 CDR2Q01850 454 aa12.55□□□□□ -0.4
DDX39A-219ENST00000592927 GFPT1Q06210 699 aaPredicted RBP12.55□□□□□ -0.4
DDX39A-219ENST00000592927 KIF5AQ12840 1032 aa12.55□□□□□ -0.4
DDX39A-219ENST00000592927 CFAP221Q4G0U5 840 aa12.55□□□□□ -0.4
DDX39A-219ENST00000592927 PPP1R2P3Q6NXS1 205 aa12.55□□□□□ -0.4
DDX39A-219ENST00000592927 ALKBH5Q6P6C2 394 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms