RNA–Protein interactions for RNA: ENST00000592763.5

ILF3-222, Transcript of interleukin enhancer binding factor 3, human

TSL 5 BASIC

Gene ILF3, Length 3,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ILF3-222	ENST00000592763	ANKRD52	Q8NB46	1076 aa		11.33	□□□□□ -0.6
ILF3-222	ENST00000592763	UNC93B1	Q9H1C4	597 aa		11.33	□□□□□ -0.6
ILF3-222	ENST00000592763	RAB6B	Q9NRW1	208 aa		11.33	□□□□□ -0.6
ILF3-222	ENST00000592763	RASGRF2	O14827	1237 aa		11.32	□□□□□ -0.6
ILF3-222	ENST00000592763	CTXN3	Q4LDR2	81 aa		11.32	□□□□□ -0.6
ILF3-222	ENST00000592763	TIGD5	Q53EQ6	642 aa		11.32	□□□□□ -0.6
ILF3-222	ENST00000592763	KDELC2	Q7Z4H8	507 aa		11.32	□□□□□ -0.6
ILF3-222	ENST00000592763	SERINC5	Q86VE9	423 aa		11.32	□□□□□ -0.6
ILF3-222	ENST00000592763	RBM15	Q96T37	977 aa	Known RBP eCLIP	11.32	□□□□□ -0.6	8e-14	■■■■□ 24.3
ILF3-222	ENST00000592763	DCLK3	Q9C098	648 aa		11.32	□□□□□ -0.6
ILF3-222	ENST00000592763	PRM3	Q9NNZ6	103 aa		11.32	□□□□□ -0.6
ILF3-222	ENST00000592763	GOLGA8K	D6RF30	607 aa		11.32	□□□□□ -0.6
ILF3-222	ENST00000592763	PIAS1	O75925	651 aa		11.32	□□□□□ -0.6
ILF3-222	ENST00000592763	ALDH2	P05091	517 aa		11.32	□□□□□ -0.6
ILF3-222	ENST00000592763	ATP2A2	P16615	1042 aa	Known RBP	11.32	□□□□□ -0.6
ILF3-222	ENST00000592763	ACADSB	P45954	432 aa		11.32	□□□□□ -0.6
ILF3-222	ENST00000592763	ALDH7A1	P49419	539 aa	Known RBP	11.32	□□□□□ -0.6
ILF3-222	ENST00000592763	MAGOH	P61326	146 aa	Known RBP	11.32	□□□□□ -0.6
ILF3-222	ENST00000592763	SLMAP	Q14BN4	828 aa		11.32	□□□□□ -0.6
ILF3-222	ENST00000592763	LONRF1	Q17RB8	773 aa		11.32	□□□□□ -0.6
ILF3-222	ENST00000592763	ARL13B	Q3SXY8	428 aa		11.32	□□□□□ -0.6
ILF3-222	ENST00000592763	UNC93A	Q86WB7	457 aa		11.32	□□□□□ -0.6
ILF3-222	ENST00000592763	ARFGAP2	Q8N6H7	521 aa		11.32	□□□□□ -0.6
ILF3-222	ENST00000592763	TTC13	Q8NBP0	860 aa		11.32	□□□□□ -0.6
ILF3-222	ENST00000592763	PYROXD1	Q8WU10	500 aa		11.32	□□□□□ -0.6
ILF3-222	ENST00000592763	BCO2	Q9BYV7	579 aa		11.32	□□□□□ -0.6
ILF3-222	ENST00000592763	OSBPL7	Q9BZF2	842 aa		11.32	□□□□□ -0.6
ILF3-222	ENST00000592763	ARHGEF37	A1IGU5	675 aa		11.32	□□□□□ -0.6
ILF3-222	ENST00000592763	VIM	P08670	466 aa	Known RBP	11.32	□□□□□ -0.6
ILF3-222	ENST00000592763	NPR3	P17342	541 aa		11.32	□□□□□ -0.6
ILF3-222	ENST00000592763	RAB27A	P51159	221 aa		11.32	□□□□□ -0.6
ILF3-222	ENST00000592763	BOLA3	Q53S33	107 aa		11.32	□□□□□ -0.6
ILF3-222	ENST00000592763	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.32	□□□□□ -0.6
ILF3-222	ENST00000592763	SEPT8	Q92599	483 aa		11.32	□□□□□ -0.6
ILF3-222	ENST00000592763	SLITRK1	Q96PX8	696 aa		11.32	□□□□□ -0.6
ILF3-222	ENST00000592763	NEUROG2	Q9H2A3	272 aa		11.32	□□□□□ -0.6
ILF3-222	ENST00000592763	LHX5	Q9H2C1	402 aa		11.32	□□□□□ -0.6
ILF3-222	ENST00000592763	PCDHGC3	Q9UN70	934 aa		11.32	□□□□□ -0.6
ILF3-222	ENST00000592763	AP4E1	Q9UPM8	1137 aa		11.32	□□□□□ -0.6
ILF3-222	ENST00000592763	NDUFAB1	O14561	156 aa		11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	PAPSS1	O43252	624 aa	Predicted RBP	11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	NRL	P54845	237 aa		11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	LPIN1	Q14693	890 aa		11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	RAB6C	Q53S08	254 aa		11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	RNF187	Q5TA31	235 aa	Predicted RBP	11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	AGMO	Q6ZNB7	445 aa		11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	CPLX4	Q7Z7G2	160 aa		11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	IFNLR1	Q8IU57	520 aa	Predicted RBP	11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	PDIK1L	Q8N165	341 aa		11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	BBOF1	Q8ND07	529 aa		11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	MICAL1	Q8TDZ2	1067 aa		11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	CFAP36	Q96G28	342 aa		11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	DDX27	Q96GQ7	796 aa	Known RBP	11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	CAPS2	Q9BXY5	557 aa		11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	RAB6C	Q9H0N0	254 aa		11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	TMEM39A	Q9NV64	488 aa		11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	PIH1D1	Q9NWS0	290 aa	Known RBP	11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	SLC27A5	Q9Y2P5	690 aa		11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	PRRC2B	Q5JSZ5	2229 aa	Known RBP	11.31	□□□□□ -0.6
ILF3-222	ENST00000592763		A0A1W2PQ45	241 aa	Predicted RBP	11.31	□□□□□ -0.6
ILF3-222	ENST00000592763		A0A1W2PQY0	241 aa		11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	CCDC78	A2IDD5	438 aa		11.31	□□□□□ -0.6
ILF3-222	ENST00000592763		F8W810	466 aa		11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	SETSIP	P0DME0	302 aa		11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	CKB	P12277	381 aa		11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	KDELR1	P24390	212 aa		11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	FNTA	P49354	379 aa		11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	TMED2	Q15363	201 aa		11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	NOMO2	Q5JPE7	1267 aa		11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	HEATR6	Q6AI08	1181 aa	Known RBP	11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	OTUD6B	Q8N6M0	293 aa		11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	DNAAF3	Q8N9W5	541 aa		11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	AEN	Q8WTP8	325 aa	Known RBP	11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	PCED1B	Q96HM7	432 aa		11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	11.31	□□□□□ -0.6	5e-6	■■■■□ 22.3
ILF3-222	ENST00000592763	GDF3	Q9NR23	364 aa		11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	CNTN3	Q9P232	1028 aa		11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	GIT1	Q9Y2X7	761 aa		11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	NEU2	Q9Y3R4	380 aa		11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	EXOC1L	A0A1B0GW35	172 aa		11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	CES2	O00748	559 aa		11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	PTGES	O14684	152 aa		11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	SKI	P12755	728 aa		11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	AMPD1	P23109	780 aa		11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	EPHB2	P29323	1055 aa		11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	ZNF143	P52747	638 aa	Predicted RBP	11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	ADCY2	Q08462	1091 aa		11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	KATNAL2	Q8IYT4	538 aa		11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	RASGEF1C	Q8N431	466 aa		11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	SLAIN1	Q8ND83	568 aa		11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	USP33	Q8TEY7	942 aa		11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	HIPK3	Q9H422	1215 aa		11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	PRKAG2	Q9UGJ0	569 aa		11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	DERA	Q9Y315	318 aa		11.31	□□□□□ -0.6
ILF3-222	ENST00000592763	ATP8B3	O60423	1300 aa		11.3	□□□□□ -0.6
ILF3-222	ENST00000592763	NR1D1	P20393	614 aa		11.3	□□□□□ -0.6
ILF3-222	ENST00000592763	IL1R2	P27930	398 aa		11.3	□□□□□ -0.6
ILF3-222	ENST00000592763	GBP1	P32455	592 aa		11.3	□□□□□ -0.6
ILF3-222	ENST00000592763	ENPEP	Q07075	957 aa		11.3	□□□□□ -0.6
ILF3-222	ENST00000592763	TUSC3	Q13454	348 aa		11.3	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms