RNA–Protein interactions for RNA: ENST00000589727.5

ATP6V0A1-222, Transcript of ATPase H+ transporting V0 subunit a1, human

TSL 5

Gene ATP6V0A1, Length 664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP6V0A1-222	ENST00000589727	MRS2	Q9HD23	443 aa		7.49	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	C1GALT1	Q9NS00	363 aa		7.49	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	GKN1	Q9NS71	199 aa		7.49	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	TM7SF3	Q9NS93	570 aa		7.49	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	SUSD2	Q9UGT4	822 aa		7.49	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	7.49	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	INSL5	Q9Y5Q6	135 aa		7.49	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	ANKHD1	Q8IWZ3	2542 aa	Known RBP	7.49	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	NBEAL1	Q6ZS30	2694 aa		7.49	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	PDCD11	Q14690	1871 aa	Known RBP	7.49	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	ADAMTS9	Q9P2N4	1935 aa		7.48	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	SPEN	Q96T58	3664 aa	Known RBP	7.48	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	CELSR1	Q9NYQ6	3014 aa		7.48	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	ANO9	A1A5B4	782 aa		7.48	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	RAB11FIP3	O75154	756 aa		7.48	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	PRNP	P04156	253 aa		7.48	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	PC	P11498	1178 aa	Known RBP	7.48	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	GNS	P15586	552 aa		7.48	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	AFM	P43652	599 aa		7.48	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	HNRNPU	Q00839	825 aa	Known RBP eCLIP	7.48	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	ID3	Q02535	119 aa		7.48	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	DRP2	Q13474	957 aa		7.48	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	ALX1	Q15699	326 aa		7.48	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	CRY1	Q16526	586 aa		7.48	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	7.48	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	NAIF1	Q69YI7	327 aa	Predicted RBP	7.48	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	SLC36A4	Q6YBV0	504 aa		7.48	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	ZNF410	Q86VK4	478 aa		7.48	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	RP1L1	Q8IWN7	2480 aa	Predicted RBP	7.48	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	TCEAL8	Q8IYN2	117 aa		7.48	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	MXRA8	Q9BRK3	442 aa		7.48	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	PAAF1	Q9BRP4	392 aa		7.48	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	ATXN3L	Q9H3M9	355 aa		7.48	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	EBF3	Q9H4W6	596 aa		7.48	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	GAREM1	Q9H706	876 aa		7.48	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	IL21R	Q9HBE5	538 aa		7.48	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	AGO4	Q9HCK5	861 aa	Known RBP	7.48	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	CRIM1	Q9NZV1	1036 aa		7.48	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	CEP72	Q9P209	647 aa		7.48	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	CACNG4	Q9UBN1	327 aa		7.48	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	GIT1	Q9Y2X7	761 aa		7.48	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	IPP	Q9Y573	584 aa		7.48	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	BACE2	Q9Y5Z0	518 aa		7.48	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	CRYBG3	Q68DQ2	2970 aa		7.48	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	MYH6	P13533	1939 aa		7.48	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	NIPBL	Q6KC79	2804 aa	eCLIP	7.47	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	OTOL1	A6NHN0	477 aa	Predicted RBP	7.47	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	IPO5	O00410	1097 aa	Known RBP	7.47	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	KLK10	O43240	276 aa		7.47	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	CILP	O75339	1184 aa		7.47	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	CER1	O95813	267 aa		7.47	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	ATF2	P15336	505 aa		7.47	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	DNM2	P50570	870 aa		7.47	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	CLDN6	P56747	220 aa		7.47	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	HAND2	P61296	217 aa		7.47	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	ROR1	Q01973	937 aa		7.47	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	SCRN1	Q12765	414 aa		7.47	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	GRIK3	Q13003	919 aa		7.47	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	SLC35G1	Q2M3R5	365 aa		7.47	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	STXBP5	Q5T5C0	1151 aa		7.47	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	VPS53	Q5VIR6	699 aa		7.47	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	OGFOD3	Q6PK18	319 aa		7.47	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	NXPE4	Q6UWF7	544 aa		7.47	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	DBX2	Q6ZNG2	339 aa		7.47	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	USP49	Q70CQ1	688 aa		7.47	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	TICAM1	Q8IUC6	712 aa		7.47	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	DHX40	Q8IX18	779 aa	Known RBP	7.47	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	SRRM1	Q8IYB3	904 aa	Known RBP	7.47	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	CCDC33	Q8N5R6	958 aa		7.47	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	TRIML1	Q8N9V2	468 aa		7.47	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	USP33	Q8TEY7	942 aa		7.47	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	KCNE4	Q8WWG9	221 aa		7.47	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	KCNB2	Q92953	911 aa		7.47	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	CD101	Q93033	1021 aa		7.47	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	HSPA12B	Q96MM6	686 aa		7.47	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	NLRP4	Q96MN2	994 aa		7.47	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	FANCD2OS	Q96PS1	177 aa		7.47	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	RNF41	Q9H4P4	317 aa	Predicted RBP	7.47	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	RIOX1	Q9H6W3	641 aa		7.47	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	HPS4	Q9NQG7	708 aa		7.47	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	KRT82	Q9NSB4	513 aa		7.47	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	NRBP2	Q9NSY0	501 aa		7.47	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	ECHDC1	Q9NTX5	307 aa		7.47	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	ADGRE2	Q9UHX3	823 aa		7.47	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	MAD2L2	Q9UI95	211 aa		7.47	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	MMP17	Q9ULZ9	603 aa		7.47	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	BTBD3	Q9Y2F9	522 aa		7.47	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	HES2	Q9Y543	173 aa		7.47	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	PCDHGB2	Q9Y5G2	931 aa		7.47	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	KNL1	Q8NG31	2342 aa		7.47	□□□□□ -1.21
ATP6V0A1-222	ENST00000589727	CASTOR2	A6NHX0	329 aa		7.46	□□□□□ -1.22
ATP6V0A1-222	ENST00000589727		K7ENP7	123 aa		7.46	□□□□□ -1.22
ATP6V0A1-222	ENST00000589727	ABLIM3	O94929	683 aa		7.46	□□□□□ -1.22
ATP6V0A1-222	ENST00000589727	SEC24A	O95486	1093 aa		7.46	□□□□□ -1.22
ATP6V0A1-222	ENST00000589727	PRAMEF12	O95522	483 aa		7.46	□□□□□ -1.22
ATP6V0A1-222	ENST00000589727	FGA	P02671	866 aa		7.46	□□□□□ -1.22
ATP6V0A1-222	ENST00000589727	PRKCB	P05771	671 aa		7.46	□□□□□ -1.22
ATP6V0A1-222	ENST00000589727	HOXA11	P31270	313 aa	Predicted RBP	7.46	□□□□□ -1.22
ATP6V0A1-222	ENST00000589727	SREBF1	P36956	1147 aa		7.46	□□□□□ -1.22
ATP6V0A1-222	ENST00000589727	MATK	P42679	507 aa		7.46	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms