RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 OASLQ15646 514 aaKnown RBP7.75□□□□□ -1.17
ZNF540-206ENST00000589117 FAM47CQ5HY64 1035 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 CYP4A22Q5TCH4 519 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 CCDC62Q6P9F0 684 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 BBS12Q6ZW61 710 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 SPATA21Q7Z572 469 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 ZBED8Q8IZ13 594 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 PDIK1LQ8N165 341 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 WDTC1Q8N5D0 677 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 SHCBP1Q8NEM2 672 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 TFAP2BQ92481 460 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 HEXIM2Q96MH2 286 aaKnown RBP7.75□□□□□ -1.17
ZNF540-206ENST00000589117 TMEM121Q9BTD3 319 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 PITPNM3Q9BZ71 974 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 CDT1Q9H211 546 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 ZWILCHQ9H900 591 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 IFT122Q9HBG6 1241 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 KLHL11Q9NVR0 708 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 POC1B-GALNT4F8VUJ3 575 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 DNM1LO00429 736 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 CST8O60676 142 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 RASSF9O75901 435 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 GJB6O95452 261 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 CXCL8P10145 99 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 PECAM1P16284 738 aaPredicted RBP7.74□□□□□ -1.17
ZNF540-206ENST00000589117 TSHRP16473 764 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 KDELR1P24390 212 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 ALDH3A1P30838 453 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 PCK1P35558 622 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 RAD23BP54727 409 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 GEMIN4P57678 1058 aaKnown RBP7.74□□□□□ -1.17
ZNF540-206ENST00000589117 CDC42EP1Q00587 391 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 MBTD1Q05BQ5 628 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 PDIA2Q13087 525 aaKnown RBP7.74□□□□□ -1.17
ZNF540-206ENST00000589117 SPARCL1Q14515 664 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 TMED2Q15363 201 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 SNCBQ16143 134 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 KLHL38Q2WGJ6 581 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 RNASEH2BQ5TBB1 312 aaKnown RBP7.74□□□□□ -1.17
ZNF540-206ENST00000589117 DENND1BQ6P3S1 775 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 PALM2Q8IXS6 379 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 ATP11CQ8NB49 1132 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 SLC35B2Q8TB61 432 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 EDEM1Q92611 657 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 KAT2BQ92831 832 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 FRMD8Q9BZ67 464 aaPredicted RBP7.74□□□□□ -1.17
ZNF540-206ENST00000589117 FHDC1Q9C0D6 1143 aaPredicted RBP7.74□□□□□ -1.17
ZNF540-206ENST00000589117 SLC40A1Q9NP59 571 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 METTL5Q9NRN9 209 aaKnown RBP7.74□□□□□ -1.17
ZNF540-206ENST00000589117 PSMC3IPQ9P2W1 217 aaPredicted RBP7.74□□□□□ -1.17
ZNF540-206ENST00000589117 ITGA11Q9UKX5 1188 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 AKT3Q9Y243 479 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 IKBKGQ9Y6K9 419 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 SIP14410 1827 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 LACTBL1A8MY62 500 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 APOC4-APOC2K7ER74 178 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 PRPF4O43172 522 aaKnown RBP eCLIP7.74□□□□□ -1.17
ZNF540-206ENST00000589117 ATP2C2O75185 946 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 CILPO75339 1184 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 LRCH4O75427 683 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 ARIH2O95376 493 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 APOC2P02655 101 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 ITGB3P05106 788 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 SLC8A1P32418 973 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 BRCA1P38398 1863 aaKnown RBP7.74□□□□□ -1.17
ZNF540-206ENST00000589117 GABRB2P47870 512 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 CTCFP49711 727 aaPredicted RBP7.74□□□□□ -1.17
ZNF540-206ENST00000589117 CLCN3P51790 818 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 GTF2A1P52655 376 aaPredicted RBP7.74□□□□□ -1.17
ZNF540-206ENST00000589117 ZNF252P-AS1Q0IIN9 211 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 TMEM132DQ14C87 1099 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 SETDB1Q15047 1291 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 PTPN20Q4JDL3 420 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 VSTM1Q6UX27 236 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 RFX6Q8HWS3 928 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 CCDC63Q8NA47 563 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 CMASQ8NFW8 434 aaPredicted RBP7.74□□□□□ -1.17
ZNF540-206ENST00000589117 GDAP1Q8TB36 358 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 ACTL9Q8TC94 416 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.74□□□□□ -1.17
ZNF540-206ENST00000589117 MAML1Q92585 1016 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 KCTD12Q96CX2 325 aaKnown RBP7.74□□□□□ -1.17
ZNF540-206ENST00000589117 HPDLQ96IR7 371 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 ACAP3Q96P50 834 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 PAIP2Q9BPZ3 127 aaKnown RBP7.74□□□□□ -1.17
ZNF540-206ENST00000589117 FGFR1OP2Q9NVK5 253 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 HAUS2Q9NVX0 235 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 RBPJLQ9UBG7 517 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 CTNNAL1Q9UBT7 734 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 BARX2Q9UMQ3 279 aaPredicted RBP7.74□□□□□ -1.17
ZNF540-206ENST00000589117 USP18Q9UMW8 372 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 KCNH4Q9UQ05 1017 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 C2CD2Q9Y426 696 aa7.74□□□□□ -1.17
ZNF540-206ENST00000589117 ZNFX1Q9P2E3 1918 aaKnown RBP7.74□□□□□ -1.17
ZNF540-206ENST00000589117 COL1A2P08123 1366 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 LOC285556D6RIA3 1793 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 M0QYV0 167 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 PRPSAP2O60256 369 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 SPAG6O75602 509 aa7.73□□□□□ -1.17
ZNF540-206ENST00000589117 ATP5HO75947 161 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms