RNA–Protein interactions for RNA: ENST00000589064.5

MBD3-205, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 1,475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-205ENST00000589064 TTC39CQ8N584 583 aa21.93■■□□□ 1.1
MBD3-205ENST00000589064 SLC4A11Q8NBS3 891 aa21.93■■□□□ 1.1
MBD3-205ENST00000589064 ATP2A3Q93084 1043 aa21.93■■□□□ 1.1
MBD3-205ENST00000589064 TMEM176AQ96HP8 235 aa21.93■■□□□ 1.1
MBD3-205ENST00000589064 FBRSL1Q9HCM7 1045 aaKnown RBP21.93■■□□□ 1.1
MBD3-205ENST00000589064 TICRRQ7Z2Z1 1910 aa21.93■■□□□ 1.1
MBD3-205ENST00000589064 TRDMT1O14717 391 aaKnown RBP21.92■■□□□ 1.1
MBD3-205ENST00000589064 COCHO43405 550 aa21.92■■□□□ 1.1
MBD3-205ENST00000589064 ZDHHC11BP0C7U3 371 aa21.92■■□□□ 1.1
MBD3-205ENST00000589064 FMO5P49326 533 aa21.92■■□□□ 1.1
MBD3-205ENST00000589064 RAD23BP54727 409 aa21.92■■□□□ 1.1
MBD3-205ENST00000589064 AMPD2Q01433 879 aa21.92■■□□□ 1.1
MBD3-205ENST00000589064 CCINQ13939 588 aa21.92■■□□□ 1.1
MBD3-205ENST00000589064 TMEM196Q5HYL7 178 aa21.92■■□□□ 1.1
MBD3-205ENST00000589064 SNX30Q5VWJ9 437 aa21.92■■□□□ 1.1
MBD3-205ENST00000589064 NAIF1Q69YI7 327 aaPredicted RBP21.92■■□□□ 1.1
MBD3-205ENST00000589064 FOXR2Q6PJQ5 311 aa21.92■■□□□ 1.1
MBD3-205ENST00000589064 ZC3H14Q6PJT7 736 aaKnown RBP21.92■■□□□ 1.1
MBD3-205ENST00000589064 IER2Q9BTL4 223 aa21.92■■□□□ 1.1
MBD3-205ENST00000589064 SRRTQ9BXP5 876 aaKnown RBP21.92■■□□□ 1.1
MBD3-205ENST00000589064 FBXO44Q9H4M3 255 aa21.92■■□□□ 1.1
MBD3-205ENST00000589064 CCSER2Q9H7U1 834 aa21.92■■□□□ 1.1
MBD3-205ENST00000589064 PRMT8Q9NR22 394 aaPredicted RBP21.92■■□□□ 1.1
MBD3-205ENST00000589064 CFAP97Q9P2B7 532 aa21.92■■□□□ 1.1
MBD3-205ENST00000589064 NUP210Q8TEM1 1887 aaPredicted RBP21.92■■□□□ 1.1
MBD3-205ENST00000589064 CACNA1IQ9P0X4 2223 aa21.91■■□□□ 1.1
MBD3-205ENST00000589064 SCAMP3O14828 347 aaKnown RBP21.91■■□□□ 1.1
MBD3-205ENST00000589064 ACO1P21399 889 aaKnown RBP21.91■■□□□ 1.1
MBD3-205ENST00000589064 CXCL12P48061 93 aa21.91■■□□□ 1.1
MBD3-205ENST00000589064 GRSF1Q12849 480 aaKnown RBP eCLIP21.91■■□□□ 1.13e-15■■■□□ 15.6
MBD3-205ENST00000589064 NR1H3Q13133 447 aa21.91■■□□□ 1.1
MBD3-205ENST00000589064 PAK1Q13153 545 aa21.91■■□□□ 1.1
MBD3-205ENST00000589064 CUL2Q13617 745 aa21.91■■□□□ 1.1
MBD3-205ENST00000589064 FSTL4Q6MZW2 842 aa21.91■■□□□ 1.1
MBD3-205ENST00000589064 SPEM1Q8N4L4 309 aa21.91■■□□□ 1.1
MBD3-205ENST00000589064 DUSP16Q9BY84 665 aa21.91■■□□□ 1.1
MBD3-205ENST00000589064 SEMA4AQ9H3S1 761 aa21.91■■□□□ 1.1
MBD3-205ENST00000589064 CCR3P51677 355 aa21.9■■□□□ 1.1
MBD3-205ENST00000589064 SATB1Q01826 763 aa21.9■■□□□ 1.1
MBD3-205ENST00000589064 ADGRG2Q8IZP9 1017 aa21.9■■□□□ 1.1
MBD3-205ENST00000589064 TRIML1Q8N9V2 468 aa21.9■■□□□ 1.1
MBD3-205ENST00000589064 ATRIPQ8WXE1 791 aa21.9■■□□□ 1.1
MBD3-205ENST00000589064 LMNAP02545 664 aaKnown RBP21.9■■□□□ 1.1
MBD3-205ENST00000589064 SYNPOQ8N3V7 929 aa21.9■■□□□ 1.1
MBD3-205ENST00000589064 NELL1Q92832 810 aa21.9■■□□□ 1.1
MBD3-205ENST00000589064 P2RY13Q9BPV8 354 aa21.9■■□□□ 1.1
MBD3-205ENST00000589064 FAM124BQ9H5Z6 455 aaPredicted RBP21.9■■□□□ 1.1
MBD3-205ENST00000589064 TLR8Q9NR97 1041 aaKnown RBP21.9■■□□□ 1.1
MBD3-205ENST00000589064 C2orf42Q9NWW7 574 aa21.9■■□□□ 1.1
MBD3-205ENST00000589064 ZSCAN32Q9NX65 697 aa21.9■■□□□ 1.1
MBD3-205ENST00000589064 SCML2Q9UQR0 700 aa21.9■■□□□ 1.1
MBD3-205ENST00000589064 PTPRDP23468 1912 aa21.89■■□□□ 1.09
MBD3-205ENST00000589064 CYP26A1O43174 497 aa21.89■■□□□ 1.09
MBD3-205ENST00000589064 NFATC1O95644 943 aa21.89■■□□□ 1.09
MBD3-205ENST00000589064 TBX18O95935 607 aa21.89■■□□□ 1.09
MBD3-205ENST00000589064 EGFP01133 1207 aa21.89■■□□□ 1.09
MBD3-205ENST00000589064 TUBP50607 506 aa21.89■■□□□ 1.09
MBD3-205ENST00000589064 DDX42Q86XP3 938 aaKnown RBP eCLIP21.89■■□□□ 1.09
MBD3-205ENST00000589064 ZFRQ96KR1 1074 aaKnown RBP21.89■■□□□ 1.09
MBD3-205ENST00000589064 PNPLA8Q9NP80 782 aa21.89■■□□□ 1.09
MBD3-205ENST00000589064 PCDHGA2Q9Y5H1 932 aa21.89■■□□□ 1.09
MBD3-205ENST00000589064 PMM2O15305 246 aa21.88■■□□□ 1.09
MBD3-205ENST00000589064 TLR5O60602 858 aa21.88■■□□□ 1.09
MBD3-205ENST00000589064 GNA14O95837 355 aa21.88■■□□□ 1.09
MBD3-205ENST00000589064 TDGF1P13385 188 aa21.88■■□□□ 1.09
MBD3-205ENST00000589064 KIF11P52732 1056 aa21.88■■□□□ 1.09
MBD3-205ENST00000589064 PPP2R5DQ14738 602 aa21.88■■□□□ 1.09
MBD3-205ENST00000589064 ARHGAP17Q68EM7 881 aa21.88■■□□□ 1.09
MBD3-205ENST00000589064 TRIM59Q8IWR1 403 aa21.88■■□□□ 1.09
MBD3-205ENST00000589064 ZBTB44Q8NCP5 570 aa21.88■■□□□ 1.09
MBD3-205ENST00000589064 CD101Q93033 1021 aa21.88■■□□□ 1.09
MBD3-205ENST00000589064 NACA2Q9H009 215 aa21.88■■□□□ 1.09
MBD3-205ENST00000589064 OSER1Q9NX31 292 aa21.88■■□□□ 1.09
MBD3-205ENST00000589064 MIA3Q5JRA6 1907 aa21.87■■□□□ 1.09
MBD3-205ENST00000589064 DENND4CQ5VZ89 1909 aa21.87■■□□□ 1.09
MBD3-205ENST00000589064 SLC9A3R1O14745 358 aaPredicted RBP21.87■■□□□ 1.09
MBD3-205ENST00000589064 YWHAEP62258 255 aaKnown RBP21.87■■□□□ 1.09
MBD3-205ENST00000589064 KCNH2Q12809 1159 aa21.87■■□□□ 1.09
MBD3-205ENST00000589064 PKN3Q6P5Z2 889 aa21.87■■□□□ 1.09
MBD3-205ENST00000589064 KIAA1958Q8N8K9 716 aa21.87■■□□□ 1.09
MBD3-205ENST00000589064 LMO3Q8TAP4 145 aa21.87■■□□□ 1.09
MBD3-205ENST00000589064 WBP2Q969T9 261 aa21.87■■□□□ 1.09
MBD3-205ENST00000589064 NT5C1BQ96P26 610 aa21.87■■□□□ 1.09
MBD3-205ENST00000589064 FAM126AQ9BYI3 521 aaPredicted RBP21.87■■□□□ 1.09
MBD3-205ENST00000589064 NMUR1Q9HB89 426 aa21.87■■□□□ 1.09
MBD3-205ENST00000589064 OBSL1O75147 1896 aa21.87■■□□□ 1.09
MBD3-205ENST00000589064 GREB1Q4ZG55 1949 aa21.86■■□□□ 1.09
MBD3-205ENST00000589064 A0A1W2PQH9 124 aa21.86■■□□□ 1.09
MBD3-205ENST00000589064 E2F8A0AVK6 867 aa21.86■■□□□ 1.09
MBD3-205ENST00000589064 P4HA2O15460 535 aa21.86■■□□□ 1.09
MBD3-205ENST00000589064 DRD1P21728 446 aa21.86■■□□□ 1.09
MBD3-205ENST00000589064 TBXAS1P24557 533 aaPredicted RBP21.86■■□□□ 1.09
MBD3-205ENST00000589064 CETN1Q12798 172 aa21.86■■□□□ 1.09
MBD3-205ENST00000589064 DHCR24Q15392 516 aa21.86■■□□□ 1.09
MBD3-205ENST00000589064 RHBDF2Q6PJF5 856 aa21.86■■□□□ 1.09
MBD3-205ENST00000589064 UBR7Q8N806 425 aa21.86■■□□□ 1.09
MBD3-205ENST00000589064 ANKRD52Q8NB46 1076 aa21.86■■□□□ 1.09
MBD3-205ENST00000589064 EHBP1Q8NDI1 1231 aa21.86■■□□□ 1.09
MBD3-205ENST00000589064 EXOC4Q96A65 974 aa21.86■■□□□ 1.09
MBD3-205ENST00000589064 RWDD2AQ9UIY3 292 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms