RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 TNFSF9P41273 254 aa15.36■□□□□ 0.05
CCDC43-203ENST00000588210 SLCO1A2P46721 670 aa15.36■□□□□ 0.05
CCDC43-203ENST00000588210 BCAR1P56945 870 aa15.36■□□□□ 0.05
CCDC43-203ENST00000588210 CAV1Q03135 178 aa15.36■□□□□ 0.05
CCDC43-203ENST00000588210 DSC1Q08554 894 aa15.36■□□□□ 0.05
CCDC43-203ENST00000588210 PTP4A2Q12974 167 aa15.36■□□□□ 0.05
CCDC43-203ENST00000588210 SLC10A6Q3KNW5 377 aa15.36■□□□□ 0.05
CCDC43-203ENST00000588210 C15orf39Q6ZRI6 1047 aa15.36■□□□□ 0.05
CCDC43-203ENST00000588210 CCDC25Q86WR0 208 aa15.36■□□□□ 0.05
CCDC43-203ENST00000588210 MCOLN2Q8IZK6 566 aa15.36■□□□□ 0.05
CCDC43-203ENST00000588210 SGSM3Q96HU1 749 aa15.36■□□□□ 0.05
CCDC43-203ENST00000588210 SNX27Q96L92 541 aa15.36■□□□□ 0.05
CCDC43-203ENST00000588210 RPF1Q9H9Y2 349 aaKnown RBP15.36■□□□□ 0.05
CCDC43-203ENST00000588210 HOMER3Q9NSC5 361 aa15.36■□□□□ 0.05
CCDC43-203ENST00000588210 SAMD15Q9P1V8 674 aa15.36■□□□□ 0.05
CCDC43-203ENST00000588210 CNTN3Q9P232 1028 aa15.36■□□□□ 0.05
CCDC43-203ENST00000588210 KIAA1671Q9BY89 1806 aa15.36■□□□□ 0.05
CCDC43-203ENST00000588210 CHD7Q9P2D1 2997 aa15.36■□□□□ 0.05
CCDC43-203ENST00000588210 EPOPA6NHQ4 379 aa15.36■□□□□ 0.05
CCDC43-203ENST00000588210 TDRD15B5MCY1 1934 aaKnown RBP15.36■□□□□ 0.05
CCDC43-203ENST00000588210 ALDH2P05091 517 aa15.36■□□□□ 0.05
CCDC43-203ENST00000588210 KRT5P13647 590 aa15.36■□□□□ 0.05
CCDC43-203ENST00000588210 ATP5DP30049 168 aa15.36■□□□□ 0.05
CCDC43-203ENST00000588210 PPM1AP35813 382 aa15.36■□□□□ 0.05
CCDC43-203ENST00000588210 CYB5D1Q6P9G0 228 aa15.36■□□□□ 0.05
CCDC43-203ENST00000588210 EXOC3L1Q86VI1 746 aa15.36■□□□□ 0.05
CCDC43-203ENST00000588210 COLGALT2Q8IYK4 626 aa15.36■□□□□ 0.05
CCDC43-203ENST00000588210 KLHL23Q8NBE8 558 aa15.36■□□□□ 0.05
CCDC43-203ENST00000588210 DDX23Q9BUQ8 820 aaKnown RBP15.36■□□□□ 0.05
CCDC43-203ENST00000588210 CHST7Q9NS84 486 aa15.36■□□□□ 0.05
CCDC43-203ENST00000588210 HAUS2Q9NVX0 235 aa15.36■□□□□ 0.05
CCDC43-203ENST00000588210 DNAJB4Q9UDY4 337 aa15.36■□□□□ 0.05
CCDC43-203ENST00000588210 ASIC3Q9UHC3 531 aa15.36■□□□□ 0.05
CCDC43-203ENST00000588210 SMIM28A0A1B0GU29 152 aa15.35■□□□□ 0.05
CCDC43-203ENST00000588210 GAS8O95995 478 aa15.35■□□□□ 0.05
CCDC43-203ENST00000588210 GALTP07902 379 aa15.35■□□□□ 0.05
CCDC43-203ENST00000588210 CXCL8P10145 99 aa15.35■□□□□ 0.05
CCDC43-203ENST00000588210 KCNE1P15382 129 aa15.35■□□□□ 0.05
CCDC43-203ENST00000588210 IVDP26440 423 aa15.35■□□□□ 0.05
CCDC43-203ENST00000588210 ACOT2P49753 483 aa15.35■□□□□ 0.05
CCDC43-203ENST00000588210 CENPCQ03188 943 aa15.35■□□□□ 0.05
CCDC43-203ENST00000588210 GPM6BQ13491 265 aa15.35■□□□□ 0.05
CCDC43-203ENST00000588210 ZBTB41Q5SVQ8 909 aa15.35■□□□□ 0.05
CCDC43-203ENST00000588210 CCDC50Q8IVM0 306 aa15.35■□□□□ 0.05
CCDC43-203ENST00000588210 DDX27Q96GQ7 796 aaKnown RBP15.35■□□□□ 0.05
CCDC43-203ENST00000588210 GUCD1Q96NT3 240 aa15.35■□□□□ 0.05
CCDC43-203ENST00000588210 TSPAN18Q96SJ8 248 aa15.35■□□□□ 0.05
CCDC43-203ENST00000588210 GAS2L1Q99501 681 aaPredicted RBP15.35■□□□□ 0.05
CCDC43-203ENST00000588210 CDX2Q99626 313 aaPredicted RBP15.35■□□□□ 0.05
CCDC43-203ENST00000588210 DCLK3Q9C098 648 aa15.35■□□□□ 0.05
CCDC43-203ENST00000588210 CXCL16Q9H2A7 254 aa15.35■□□□□ 0.05
CCDC43-203ENST00000588210 SLC12A4Q9UP95 1085 aa15.35■□□□□ 0.05
CCDC43-203ENST00000588210 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.35■□□□□ 0.05
CCDC43-203ENST00000588210 CITO14578 2027 aa15.35■□□□□ 0.05
CCDC43-203ENST00000588210 RFXAPO00287 272 aa15.34■□□□□ 0.05
CCDC43-203ENST00000588210 CHKAP35790 457 aa15.34■□□□□ 0.05
CCDC43-203ENST00000588210 CLDN10P78369 228 aa15.34■□□□□ 0.05
CCDC43-203ENST00000588210 PLCB3Q01970 1234 aa15.34■□□□□ 0.05
CCDC43-203ENST00000588210 TUSC3Q13454 348 aa15.34■□□□□ 0.05
CCDC43-203ENST00000588210 CRELD2Q6UXH1 353 aaPredicted RBP15.34■□□□□ 0.05
CCDC43-203ENST00000588210 PPP1R10Q96QC0 940 aaKnown RBP15.34■□□□□ 0.05
CCDC43-203ENST00000588210 HERPUD2Q9BSE4 406 aa15.34■□□□□ 0.05
CCDC43-203ENST00000588210 SLC38A7Q9NVC3 462 aa15.34■□□□□ 0.05
CCDC43-203ENST00000588210 SPG21Q9NZD8 308 aa15.34■□□□□ 0.05
CCDC43-203ENST00000588210 EXTL3O43909 919 aa15.34■□□□□ 0.05
CCDC43-203ENST00000588210 B4GALT3O60512 393 aa15.34■□□□□ 0.05
CCDC43-203ENST00000588210 TCEA3O75764 348 aa15.34■□□□□ 0.05
CCDC43-203ENST00000588210 FGF18O76093 207 aa15.34■□□□□ 0.05
CCDC43-203ENST00000588210 OAS1P00973 400 aaKnown RBP15.34■□□□□ 0.05
CCDC43-203ENST00000588210 CYP1A1P04798 512 aaPredicted RBP15.34■□□□□ 0.05
CCDC43-203ENST00000588210 ITGB1P05556 798 aa15.34■□□□□ 0.05
CCDC43-203ENST00000588210 RRM1P23921 792 aa15.34■□□□□ 0.05
CCDC43-203ENST00000588210 PBX3P40426 434 aa15.34■□□□□ 0.05
CCDC43-203ENST00000588210 SLC11A1P49279 550 aa15.34■□□□□ 0.05
CCDC43-203ENST00000588210 BPIFB4P59827 614 aa15.34■□□□□ 0.05
CCDC43-203ENST00000588210 SNX1Q13596 522 aa15.34■□□□□ 0.05
CCDC43-203ENST00000588210 SNCBQ16143 134 aa15.34■□□□□ 0.05
CCDC43-203ENST00000588210 LONRF1Q17RB8 773 aa15.34■□□□□ 0.05
CCDC43-203ENST00000588210 GLRA4Q5JXX5 417 aa15.34■□□□□ 0.05
CCDC43-203ENST00000588210 CCDC91Q7Z6B0 441 aa15.34■□□□□ 0.05
CCDC43-203ENST00000588210 PARP9Q8IXQ6 854 aa15.34■□□□□ 0.05
CCDC43-203ENST00000588210 SLC39A11Q8N1S5 342 aa15.34■□□□□ 0.05
CCDC43-203ENST00000588210 IPO4Q8TEX9 1081 aaKnown RBP15.34■□□□□ 0.05
CCDC43-203ENST00000588210 GDPD5Q8WTR4 605 aa15.34■□□□□ 0.05
CCDC43-203ENST00000588210 FAM213AQ9BRX8 229 aa15.34■□□□□ 0.05
CCDC43-203ENST00000588210 PI4K2AQ9BTU6 479 aa15.34■□□□□ 0.05
CCDC43-203ENST00000588210 TRIM7Q9C029 511 aa15.34■□□□□ 0.05
CCDC43-203ENST00000588210 KIAA1586Q9HCI6 787 aa15.34■□□□□ 0.05
CCDC43-203ENST00000588210 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.34■□□□□ 0.05
CCDC43-203ENST00000588210 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.34■□□□□ 0.05
CCDC43-203ENST00000588210 LACTBL1A8MY62 500 aa15.33■□□□□ 0.04
CCDC43-203ENST00000588210 NRP1O14786 923 aa15.33■□□□□ 0.04
CCDC43-203ENST00000588210 PSTPIP1O43586 416 aa15.33■□□□□ 0.04
CCDC43-203ENST00000588210 LPXNO60711 386 aa15.33■□□□□ 0.04
CCDC43-203ENST00000588210 PROSCO94903 275 aa15.33■□□□□ 0.04
CCDC43-203ENST00000588210 ACSL3O95573 720 aa15.33■□□□□ 0.04
CCDC43-203ENST00000588210 TTC4O95801 387 aa15.33■□□□□ 0.04
CCDC43-203ENST00000588210 VIMP08670 466 aaKnown RBP15.33■□□□□ 0.04
CCDC43-203ENST00000588210 ATF2P15336 505 aa15.33■□□□□ 0.04
CCDC43-203ENST00000588210 POU3F3P20264 500 aaPredicted RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms