RNA–Protein interactions for RNA: ENST00000587223.1

NPC1-206, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-206ENST00000587223 KXD1Q9BQD3 176 aa6.91□□□□□ -1.3
NPC1-206ENST00000587223 RPP25Q9BUL9 199 aaKnown RBP6.91□□□□□ -1.3
NPC1-206ENST00000587223 NAA15Q9BXJ9 866 aaKnown RBP6.91□□□□□ -1.3
NPC1-206ENST00000587223 PDCL3Q9H2J4 239 aa6.91□□□□□ -1.3
NPC1-206ENST00000587223 PNPLA8Q9NP80 782 aa6.91□□□□□ -1.3
NPC1-206ENST00000587223 ACP6Q9NPH0 428 aa6.91□□□□□ -1.3
NPC1-206ENST00000587223 NLRC4Q9NPP4 1024 aa6.91□□□□□ -1.3
NPC1-206ENST00000587223 AJAP1Q9UKB5 411 aaPredicted RBP6.91□□□□□ -1.3
NPC1-206ENST00000587223 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.91□□□□□ -1.3
NPC1-206ENST00000587223 SORCS3Q9UPU3 1222 aa6.91□□□□□ -1.3
NPC1-206ENST00000587223 SCML2Q9UQR0 700 aa6.91□□□□□ -1.3
NPC1-206ENST00000587223 SIK3Q9Y2K2 1263 aa6.91□□□□□ -1.3
NPC1-206ENST00000587223 DAAM1Q9Y4D1 1078 aa6.91□□□□□ -1.3
NPC1-206ENST00000587223 FHOD1Q9Y613 1164 aa6.91□□□□□ -1.3
NPC1-206ENST00000587223 DENND4AQ7Z401 1863 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 GREB1Q4ZG55 1949 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 ZNF638Q14966 1978 aaKnown RBP6.9□□□□□ -1.3
NPC1-206ENST00000587223 TRAV19A0A0A6YYK7 116 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 A0A1B0GTH6 734 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 FAM92AA1XBS5 289 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 C2orf78A6NCI8 922 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 HEPACAM2A8MVW5 462 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 PI4K2BG5E9Z4 385 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 TULP2O00295 520 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 ATMINO43313 823 aaPredicted RBP6.9□□□□□ -1.3
NPC1-206ENST00000587223 ECI2O75521 394 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 TADA3O75528 432 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 CKMP06732 381 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 TPM3P06753 285 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 USP17L7P0C7H9 530 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 PNMA6AP0CW24 399 aaPredicted RBP6.9□□□□□ -1.3
NPC1-206ENST00000587223 LCP1P13796 627 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 PFKLP17858 780 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 WEE1P30291 646 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 CLCN1P35523 988 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 SOX5P35711 763 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 PLA2G4AP47712 749 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 RGS7P49802 495 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 TKTL1P51854 596 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 ZXDAP98168 799 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 PKDCCQ504Y2 493 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 HECTD3Q5T447 861 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 GPRIN1Q7Z2K8 1008 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 SLC47A2Q86VL8 602 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 MFSD6LQ8IWD5 586 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 YAF2Q8IY57 180 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 UBALD2Q8IYN6 164 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 SIX6OS1Q8N1H7 587 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 CELF5Q8N6W0 485 aaKnown RBP6.9□□□□□ -1.3
NPC1-206ENST00000587223 ARL14EPQ8N8R7 260 aaPredicted RBP6.9□□□□□ -1.3
NPC1-206ENST00000587223 TTC16Q8NEE8 873 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 SLC35F5Q8WV83 523 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 KCTD13Q8WZ19 329 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 EDAQ92838 391 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 KHSRPQ92945 711 aaKnown RBP eCLIP6.9□□□□□ -1.3
NPC1-206ENST00000587223 SECISBP2LQ93073 1101 aaKnown RBP6.9□□□□□ -1.3
NPC1-206ENST00000587223 HSFY1Q96LI6 401 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 ZSWIM1Q9BR11 485 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 ANP32EQ9BTT0 268 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 TRMT61BQ9BVS5 477 aaKnown RBP6.9□□□□□ -1.3
NPC1-206ENST00000587223 PLA2G2FQ9BZM2 168 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 NACA2Q9H009 215 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 RNF38Q9H0F5 515 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 SMG9Q9H0W8 520 aaKnown RBP6.9□□□□□ -1.3
NPC1-206ENST00000587223 GANQ9H2C0 597 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 OCEL1Q9H607 264 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 EPHX3Q9H6B9 360 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 TRPV4Q9HBA0 871 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 TLR8Q9NR97 1041 aaKnown RBP6.9□□□□□ -1.3
NPC1-206ENST00000587223 ST7Q9NRC1 585 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 TDP1Q9NUW8 608 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 THG1LQ9NWX6 298 aaKnown RBP6.9□□□□□ -1.3
NPC1-206ENST00000587223 IFNKQ9P0W0 207 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 GMIPQ9P107 970 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 CEP83Q9Y592 693 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 USP3Q9Y6I4 520 aa6.9□□□□□ -1.3
NPC1-206ENST00000587223 EYSQ5T1H1 3165 aa6.89□□□□□ -1.31
NPC1-206ENST00000587223 A0A1W2PQC6 194 aa6.89□□□□□ -1.31
NPC1-206ENST00000587223 A0A1W2PQH9 124 aa6.89□□□□□ -1.31
NPC1-206ENST00000587223 F8VZ95 297 aa6.89□□□□□ -1.31
NPC1-206ENST00000587223 PIK3R2O00459 728 aa6.89□□□□□ -1.31
NPC1-206ENST00000587223 ZNF263O14978 683 aa6.89□□□□□ -1.31
NPC1-206ENST00000587223 EPHB6O15197 1021 aa6.89□□□□□ -1.31
NPC1-206ENST00000587223 CBFA2T2O43439 604 aa6.89□□□□□ -1.31
NPC1-206ENST00000587223 NARSO43776 548 aaKnown RBP6.89□□□□□ -1.31
NPC1-206ENST00000587223 GFPT2O94808 682 aa6.89□□□□□ -1.31
NPC1-206ENST00000587223 ZBED1O96006 694 aa6.89□□□□□ -1.31
NPC1-206ENST00000587223 CFHP08603 1231 aa6.89□□□□□ -1.31
NPC1-206ENST00000587223 ZDHHC11BP0C7U3 371 aa6.89□□□□□ -1.31
NPC1-206ENST00000587223 CCDC172P0C7W6 258 aa6.89□□□□□ -1.31
NPC1-206ENST00000587223 MBL2P11226 248 aaPredicted RBP6.89□□□□□ -1.31
NPC1-206ENST00000587223 RALAP11233 206 aa6.89□□□□□ -1.31
NPC1-206ENST00000587223 RARGP13631 454 aa6.89□□□□□ -1.31
NPC1-206ENST00000587223 CYP11B1P15538 503 aa6.89□□□□□ -1.31
NPC1-206ENST00000587223 PSMC3P17980 439 aa6.89□□□□□ -1.31
NPC1-206ENST00000587223 GDI1P31150 447 aa6.89□□□□□ -1.31
NPC1-206ENST00000587223 ATP5C1P36542 298 aaKnown RBP6.89□□□□□ -1.31
NPC1-206ENST00000587223 GPD2P43304 727 aa6.89□□□□□ -1.31
NPC1-206ENST00000587223 ACADSBP45954 432 aa6.89□□□□□ -1.31
NPC1-206ENST00000587223 SNX16P57768 344 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms