RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 VCPP55072 806 aaKnown RBP23.31■■□□□ 1.32
CIRBP-208ENST00000586548 CAV1Q03135 178 aa23.31■■□□□ 1.32
CIRBP-208ENST00000586548 SLC24A5Q71RS6 500 aa23.31■■□□□ 1.32
CIRBP-208ENST00000586548 CCHCR1Q8TD31 782 aa23.31■■□□□ 1.32
CIRBP-208ENST00000586548 NGRNQ9NPE2 291 aaKnown RBP23.31■■□□□ 1.32
CIRBP-208ENST00000586548 TIMM13Q9Y5L4 95 aaPredicted RBP23.31■■□□□ 1.32
CIRBP-208ENST00000586548 CST8O60676 142 aa23.3■■□□□ 1.32
CIRBP-208ENST00000586548 B3GAT3O94766 335 aa23.3■■□□□ 1.32
CIRBP-208ENST00000586548 CD48P09326 243 aa23.3■■□□□ 1.32
CIRBP-208ENST00000586548 ARSEP51690 589 aa23.3■■□□□ 1.32
CIRBP-208ENST00000586548 TERF2Q15554 542 aa23.3■■□□□ 1.32
CIRBP-208ENST00000586548 OASLQ15646 514 aaKnown RBP23.3■■□□□ 1.32
CIRBP-208ENST00000586548 RAB6CQ53S08 254 aa23.3■■□□□ 1.32
CIRBP-208ENST00000586548 CLEC20AQ6ZU45 233 aa23.3■■□□□ 1.32
CIRBP-208ENST00000586548 RTN4RL1Q86UN2 441 aaPredicted RBP23.3■■□□□ 1.32
CIRBP-208ENST00000586548 SLC35B2Q8TB61 432 aa23.3■■□□□ 1.32
CIRBP-208ENST00000586548 C11orf84Q9BUA3 381 aaPredicted RBP23.3■■□□□ 1.32
CIRBP-208ENST00000586548 RAB6CQ9H0N0 254 aa23.3■■□□□ 1.32
CIRBP-208ENST00000586548 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.3■■□□□ 1.32
CIRBP-208ENST00000586548 DSEQ9UL01 958 aa23.3■■□□□ 1.32
CIRBP-208ENST00000586548 ATP8A1Q9Y2Q0 1164 aa23.3■■□□□ 1.32
CIRBP-208ENST00000586548 TRIM17Q9Y577 477 aa23.3■■□□□ 1.32
CIRBP-208ENST00000586548 M0QZQ0 153 aa23.3■■□□□ 1.32
CIRBP-208ENST00000586548 KRT14P02533 472 aa23.3■■□□□ 1.32
CIRBP-208ENST00000586548 KLRC2P26717 231 aa23.3■■□□□ 1.32
CIRBP-208ENST00000586548 ADIGQ0VDE8 80 aa23.3■■□□□ 1.32
CIRBP-208ENST00000586548 PDK2Q15119 407 aa23.3■■□□□ 1.32
CIRBP-208ENST00000586548 GLB1LQ6UWU2 654 aa23.3■■□□□ 1.32
CIRBP-208ENST00000586548 CD300LGQ6UXG3 332 aa23.3■■□□□ 1.32
CIRBP-208ENST00000586548 GSTA5Q7RTV2 222 aa23.3■■□□□ 1.32
CIRBP-208ENST00000586548 FAM35AQ86V20 835 aa23.3■■□□□ 1.32
CIRBP-208ENST00000586548 METTL23Q86XA0 190 aa23.3■■□□□ 1.32
CIRBP-208ENST00000586548 RFX6Q8HWS3 928 aa23.3■■□□□ 1.32
CIRBP-208ENST00000586548 ALLCQ8N6M5 410 aa23.3■■□□□ 1.32
CIRBP-208ENST00000586548 BBOF1Q8ND07 529 aa23.3■■□□□ 1.32
CIRBP-208ENST00000586548 MYCBPAPQ8TBZ2 947 aa23.3■■□□□ 1.32
CIRBP-208ENST00000586548 LINC01599Q8WXQ3 324 aa23.3■■□□□ 1.32
CIRBP-208ENST00000586548 CENPIQ92674 756 aaPredicted RBP23.3■■□□□ 1.32
CIRBP-208ENST00000586548 DDX23Q9BUQ8 820 aaKnown RBP23.3■■□□□ 1.32
CIRBP-208ENST00000586548 KRT82Q9NSB4 513 aa23.3■■□□□ 1.32
CIRBP-208ENST00000586548 ZNF148Q9UQR1 794 aa23.3■■□□□ 1.32
CIRBP-208ENST00000586548 ARHGEF37A1IGU5 675 aa23.29■■□□□ 1.32
CIRBP-208ENST00000586548 H0YGN5 161 aa23.29■■□□□ 1.32
CIRBP-208ENST00000586548 ITGAVP06756 1048 aa23.29■■□□□ 1.32
CIRBP-208ENST00000586548 ADCY8P40145 1251 aa23.29■■□□□ 1.32
CIRBP-208ENST00000586548 CDK7P50613 346 aa23.29■■□□□ 1.32
CIRBP-208ENST00000586548 PMS2P54278 862 aa23.29■■□□□ 1.32
CIRBP-208ENST00000586548 CDH6P55285 790 aa23.29■■□□□ 1.32
CIRBP-208ENST00000586548 FAM189BP81408 668 aa23.29■■□□□ 1.32
CIRBP-208ENST00000586548 SLMAPQ14BN4 828 aa23.29■■□□□ 1.32
CIRBP-208ENST00000586548 TRIP13Q15645 432 aaPredicted RBP23.29■■□□□ 1.32
CIRBP-208ENST00000586548 RHBDF2Q6PJF5 856 aa23.29■■□□□ 1.32
CIRBP-208ENST00000586548 VSIG1Q86XK7 387 aa23.29■■□□□ 1.32
CIRBP-208ENST00000586548 MAP7D3Q8IWC1 876 aa23.29■■□□□ 1.32
CIRBP-208ENST00000586548 FTHL17Q9BXU8 183 aa23.29■■□□□ 1.32
CIRBP-208ENST00000586548 CALN1Q9BXU9 219 aa23.29■■□□□ 1.32
CIRBP-208ENST00000586548 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.29■■□□□ 1.32
CIRBP-208ENST00000586548 NFS1Q9Y697 457 aa23.29■■□□□ 1.32
CIRBP-208ENST00000586548 MDM4O15151 490 aa23.28■■□□□ 1.32
CIRBP-208ENST00000586548 TP73O15350 636 aa23.28■■□□□ 1.32
CIRBP-208ENST00000586548 BEST1O76090 585 aa23.28■■□□□ 1.32
CIRBP-208ENST00000586548 SELPP16109 830 aa23.28■■□□□ 1.32
CIRBP-208ENST00000586548 HDAC4P56524 1084 aa23.28■■□□□ 1.32
CIRBP-208ENST00000586548 SCYL2Q6P3W7 929 aa23.28■■□□□ 1.32
CIRBP-208ENST00000586548 DCLRE1AQ6PJP8 1040 aa23.28■■□□□ 1.32
CIRBP-208ENST00000586548 LRRC8DQ7L1W4 858 aa23.28■■□□□ 1.32
CIRBP-208ENST00000586548 ACTL9Q8TC94 416 aa23.28■■□□□ 1.32
CIRBP-208ENST00000586548 HAUS1Q96CS2 278 aa23.28■■□□□ 1.32
CIRBP-208ENST00000586548 PCED1BQ96HM7 432 aa23.28■■□□□ 1.32
CIRBP-208ENST00000586548 LRRC4Q9HBW1 653 aa23.28■■□□□ 1.32
CIRBP-208ENST00000586548 ADAM21Q9UKJ8 722 aa23.28■■□□□ 1.32
CIRBP-208ENST00000586548 MYBPHLA2RUH7 354 aa23.28■■□□□ 1.32
CIRBP-208ENST00000586548 APOC4-APOC2K7ER74 178 aa23.28■■□□□ 1.32
CIRBP-208ENST00000586548 DNM1LO00429 736 aa23.28■■□□□ 1.32
CIRBP-208ENST00000586548 DAB1O75553 588 aa23.28■■□□□ 1.32
CIRBP-208ENST00000586548 APOC2P02655 101 aa23.28■■□□□ 1.32
CIRBP-208ENST00000586548 BRCC3P46736 316 aa23.28■■□□□ 1.32
CIRBP-208ENST00000586548 DYNLT1P63172 113 aa23.28■■□□□ 1.32
CIRBP-208ENST00000586548 MRPS5P82675 430 aaKnown RBP23.28■■□□□ 1.32
CIRBP-208ENST00000586548 OTUD4Q01804 1114 aaKnown RBP23.28■■□□□ 1.32
CIRBP-208ENST00000586548 ADCY1Q08828 1119 aa23.28■■□□□ 1.32
CIRBP-208ENST00000586548 BFSP2Q13515 415 aa23.28■■□□□ 1.32
CIRBP-208ENST00000586548 TFDP2Q14188 446 aa23.28■■□□□ 1.32
CIRBP-208ENST00000586548 DPYSL3Q14195 570 aa23.28■■□□□ 1.32
CIRBP-208ENST00000586548 SH3TC2Q8TF17 1288 aa23.28■■□□□ 1.32
CIRBP-208ENST00000586548 RSPH1Q8WYR4 309 aa23.28■■□□□ 1.32
CIRBP-208ENST00000586548 ACBD6Q9BR61 282 aa23.28■■□□□ 1.32
CIRBP-208ENST00000586548 TSPYL1Q9H0U9 437 aa23.28■■□□□ 1.32
CIRBP-208ENST00000586548 PABPC3Q9H361 631 aaKnown RBP23.28■■□□□ 1.32
CIRBP-208ENST00000586548 FAM204AQ9H8W3 233 aa23.28■■□□□ 1.32
CIRBP-208ENST00000586548 GOLGA6CA6NDK9 693 aa23.27■■□□□ 1.32
CIRBP-208ENST00000586548 I3L4J1 428 aa23.27■■□□□ 1.32
CIRBP-208ENST00000586548 AP1G2O75843 785 aa23.27■■□□□ 1.32
CIRBP-208ENST00000586548 GOLGA6DP0CG33 693 aa23.27■■□□□ 1.32
CIRBP-208ENST00000586548 MATKP42679 507 aa23.27■■□□□ 1.32
CIRBP-208ENST00000586548 ITGA8P53708 1063 aa23.27■■□□□ 1.32
CIRBP-208ENST00000586548 GYS2P54840 703 aa23.27■■□□□ 1.32
CIRBP-208ENST00000586548 MAP3K7CLP57077 242 aa23.27■■□□□ 1.32
CIRBP-208ENST00000586548 KRT81Q14533 505 aa23.27■■□□□ 1.32
CIRBP-208ENST00000586548 STRADAQ7RTN6 431 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms