RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	FAM3C	Q92520	227 aa		14.11	□□□□□ -0.15
SREBF1-223	ENST00000584760	MSANTD3	Q96H12	275 aa		14.11	□□□□□ -0.15
SREBF1-223	ENST00000584760	SMO	Q99835	787 aa		14.11	□□□□□ -0.15
SREBF1-223	ENST00000584760	FAM83C	Q9BQN1	747 aa		14.11	□□□□□ -0.15
SREBF1-223	ENST00000584760	NT5C1A	Q9BXI3	368 aa		14.11	□□□□□ -0.15
SREBF1-223	ENST00000584760	CHRD	Q9H2X0	955 aa		14.11	□□□□□ -0.15
SREBF1-223	ENST00000584760	CSNK1G1	Q9HCP0	422 aa		14.11	□□□□□ -0.15
SREBF1-223	ENST00000584760	GTSE1	Q9NYZ3	720 aa		14.11	□□□□□ -0.15
SREBF1-223	ENST00000584760	TRPM5	Q9NZQ8	1165 aa		14.11	□□□□□ -0.15
SREBF1-223	ENST00000584760	FAM92A	A1XBS5	289 aa		14.1	□□□□□ -0.15
SREBF1-223	ENST00000584760	SLC30A4	O14863	429 aa		14.1	□□□□□ -0.15
SREBF1-223	ENST00000584760	RTN3	O95197	1032 aa	Predicted RBP	14.1	□□□□□ -0.15
SREBF1-223	ENST00000584760	RET	P07949	1114 aa		14.1	□□□□□ -0.15
SREBF1-223	ENST00000584760	USP17L7	P0C7H9	530 aa		14.1	□□□□□ -0.15
SREBF1-223	ENST00000584760	PFKL	P17858	780 aa		14.1	□□□□□ -0.15
SREBF1-223	ENST00000584760	KCNA4	P22459	653 aa		14.1	□□□□□ -0.15
SREBF1-223	ENST00000584760	CTH	P32929	405 aa		14.1	□□□□□ -0.15
SREBF1-223	ENST00000584760	SOX9	P48436	509 aa		14.1	□□□□□ -0.15
SREBF1-223	ENST00000584760	PPP3CC	P48454	512 aa		14.1	□□□□□ -0.15
SREBF1-223	ENST00000584760	FMO5	P49326	533 aa		14.1	□□□□□ -0.15
SREBF1-223	ENST00000584760	PDE6C	P51160	858 aa		14.1	□□□□□ -0.15
SREBF1-223	ENST00000584760	SLC5A3	P53794	718 aa		14.1	□□□□□ -0.15
SREBF1-223	ENST00000584760	TNK2	Q07912	1038 aa		14.1	□□□□□ -0.15
SREBF1-223	ENST00000584760	ARL14EP	Q8N8R7	260 aa	Predicted RBP	14.1	□□□□□ -0.15
SREBF1-223	ENST00000584760	NETO1	Q8TDF5	533 aa		14.1	□□□□□ -0.15
SREBF1-223	ENST00000584760	TATDN2	Q93075	761 aa		14.1	□□□□□ -0.15
SREBF1-223	ENST00000584760	SLITRK1	Q96PX8	696 aa		14.1	□□□□□ -0.15
SREBF1-223	ENST00000584760	CYP2S1	Q96SQ9	504 aa		14.1	□□□□□ -0.15
SREBF1-223	ENST00000584760	HNRNPAB	Q99729	332 aa	Known RBP	14.1	□□□□□ -0.15
SREBF1-223	ENST00000584760	FAM124B	Q9H5Z6	455 aa	Predicted RBP	14.1	□□□□□ -0.15
SREBF1-223	ENST00000584760	HPS4	Q9NQG7	708 aa		14.1	□□□□□ -0.15
SREBF1-223	ENST00000584760	CISH	Q9NSE2	258 aa		14.1	□□□□□ -0.15
SREBF1-223	ENST00000584760	IL37	Q9NZH6	218 aa		14.1	□□□□□ -0.15
SREBF1-223	ENST00000584760	ARHGAP26	Q9UNA1	814 aa		14.1	□□□□□ -0.15
SREBF1-223	ENST00000584760	ACACB	O00763	2458 aa		14.1	□□□□□ -0.15
SREBF1-223	ENST00000584760	SPECC1L-ADORA2A	F8WAN1	911 aa		14.09	□□□□□ -0.15
SREBF1-223	ENST00000584760	PMM2	O15305	246 aa		14.09	□□□□□ -0.15
SREBF1-223	ENST00000584760	OAS1	P00973	400 aa	Known RBP	14.09	□□□□□ -0.15
SREBF1-223	ENST00000584760	FAM200B	P0CF97	657 aa		14.09	□□□□□ -0.15
SREBF1-223	ENST00000584760	TCF3	P15923	654 aa		14.09	□□□□□ -0.15
SREBF1-223	ENST00000584760	HDC	P19113	662 aa		14.09	□□□□□ -0.15
SREBF1-223	ENST00000584760	TRIM21	P19474	475 aa	Known RBP	14.09	□□□□□ -0.15
SREBF1-223	ENST00000584760	YWHAQ	P27348	245 aa		14.09	□□□□□ -0.15
SREBF1-223	ENST00000584760	CXCL12	P48061	93 aa		14.09	□□□□□ -0.15
SREBF1-223	ENST00000584760	CCR3	P51677	355 aa		14.09	□□□□□ -0.15
SREBF1-223	ENST00000584760	MARS	P56192	900 aa	Known RBP	14.09	□□□□□ -0.15
SREBF1-223	ENST00000584760	STX17	P56962	302 aa		14.09	□□□□□ -0.15
SREBF1-223	ENST00000584760	ZXDB	P98169	803 aa		14.09	□□□□□ -0.15
SREBF1-223	ENST00000584760	SATB1	Q01826	763 aa		14.09	□□□□□ -0.15
SREBF1-223	ENST00000584760	IFRD2	Q12894	506 aa	Predicted RBP	14.09	□□□□□ -0.15
SREBF1-223	ENST00000584760	SIM2	Q14190	667 aa	Predicted RBP	14.09	□□□□□ -0.15
SREBF1-223	ENST00000584760	MTF1	Q14872	753 aa		14.09	□□□□□ -0.15
SREBF1-223	ENST00000584760	CCDC40	Q4G0X9	1142 aa		14.09	□□□□□ -0.15
SREBF1-223	ENST00000584760	WDR44	Q5JSH3	913 aa		14.09	□□□□□ -0.15
SREBF1-223	ENST00000584760	C1orf228	Q6PIY5	440 aa		14.09	□□□□□ -0.15
SREBF1-223	ENST00000584760	TXNDC11	Q6PKC3	985 aa		14.09	□□□□□ -0.15
SREBF1-223	ENST00000584760	MAMSTR	Q6ZN01	415 aa		14.09	□□□□□ -0.15
SREBF1-223	ENST00000584760	CLEC20A	Q6ZU45	233 aa		14.09	□□□□□ -0.15
SREBF1-223	ENST00000584760	RALGPS2	Q86X27	583 aa	Predicted RBP	14.09	□□□□□ -0.15
SREBF1-223	ENST00000584760	TTC39C	Q8N584	583 aa		14.09	□□□□□ -0.15
SREBF1-223	ENST00000584760	SCAMP5	Q8TAC9	235 aa		14.09	□□□□□ -0.15
SREBF1-223	ENST00000584760	OVCA2	Q8WZ82	227 aa		14.09	□□□□□ -0.15
SREBF1-223	ENST00000584760	CHFR	Q96EP1	664 aa		14.09	□□□□□ -0.15
SREBF1-223	ENST00000584760	CLSTN2	Q9H4D0	955 aa		14.09	□□□□□ -0.15
SREBF1-223	ENST00000584760	C8orf33	Q9H7E9	229 aa	Predicted RBP	14.09	□□□□□ -0.15
SREBF1-223	ENST00000584760	GKN1	Q9NS71	199 aa		14.09	□□□□□ -0.15
SREBF1-223	ENST00000584760	SEMA4G	Q9NTN9	838 aa		14.09	□□□□□ -0.15
SREBF1-223	ENST00000584760	THG1L	Q9NWX6	298 aa	Known RBP	14.09	□□□□□ -0.15
SREBF1-223	ENST00000584760	OTOL1	A6NHN0	477 aa	Predicted RBP	14.08	□□□□□ -0.16
SREBF1-223	ENST00000584760	CHURC1-FNTB	B4DL54	471 aa		14.08	□□□□□ -0.16
SREBF1-223	ENST00000584760	HR	O43593	1189 aa		14.08	□□□□□ -0.16
SREBF1-223	ENST00000584760	GDF9	O60383	454 aa		14.08	□□□□□ -0.16
SREBF1-223	ENST00000584760	ADORA2B	P29275	332 aa		14.08	□□□□□ -0.16
SREBF1-223	ENST00000584760	FNTB	P49356	437 aa		14.08	□□□□□ -0.16
SREBF1-223	ENST00000584760	KPNA1	P52294	538 aa	Predicted RBP	14.08	□□□□□ -0.16
SREBF1-223	ENST00000584760	RAD23B	P54727	409 aa		14.08	□□□□□ -0.16
SREBF1-223	ENST00000584760	MAP3K7CL	P57077	242 aa		14.08	□□□□□ -0.16
SREBF1-223	ENST00000584760	SLC7A9	P82251	487 aa		14.08	□□□□□ -0.16
SREBF1-223	ENST00000584760	DMWD	Q09019	674 aa		14.08	□□□□□ -0.16
SREBF1-223	ENST00000584760	SRSF5	Q13243	272 aa	Known RBP	14.08	□□□□□ -0.16
SREBF1-223	ENST00000584760	CUL2	Q13617	745 aa		14.08	□□□□□ -0.16
SREBF1-223	ENST00000584760	ITPRIPL2	Q3MIP1	535 aa		14.08	□□□□□ -0.16
SREBF1-223	ENST00000584760	SNX30	Q5VWJ9	437 aa		14.08	□□□□□ -0.16
SREBF1-223	ENST00000584760	TRIM68	Q6AZZ1	485 aa		14.08	□□□□□ -0.16
SREBF1-223	ENST00000584760	GPRIN1	Q7Z2K8	1008 aa		14.08	□□□□□ -0.16
SREBF1-223	ENST00000584760	TRIM59	Q8IWR1	403 aa		14.08	□□□□□ -0.16
SREBF1-223	ENST00000584760	SLC4A11	Q8NBS3	891 aa		14.08	□□□□□ -0.16
SREBF1-223	ENST00000584760	PDZD8	Q8NEN9	1154 aa		14.08	□□□□□ -0.16
SREBF1-223	ENST00000584760	TTC8	Q8TAM2	541 aa		14.08	□□□□□ -0.16
SREBF1-223	ENST00000584760	SH3RF2	Q8TEC5	729 aa		14.08	□□□□□ -0.16
SREBF1-223	ENST00000584760	FBXO32	Q969P5	355 aa		14.08	□□□□□ -0.16
SREBF1-223	ENST00000584760	CYFIP2	Q96F07	1278 aa		14.08	□□□□□ -0.16
SREBF1-223	ENST00000584760	MED15	Q96RN5	788 aa		14.08	□□□□□ -0.16
SREBF1-223	ENST00000584760	EBF3	Q9H4W6	596 aa		14.08	□□□□□ -0.16
SREBF1-223	ENST00000584760	COMMD8	Q9NX08	183 aa		14.08	□□□□□ -0.16
SREBF1-223	ENST00000584760	MYOF	Q9NZM1	2061 aa		14.07	□□□□□ -0.16
SREBF1-223	ENST00000584760	HHLA1	C9JL84	531 aa		14.07	□□□□□ -0.16
SREBF1-223	ENST00000584760	LRP3	O75074	770 aa		14.07	□□□□□ -0.16
SREBF1-223	ENST00000584760	GNA14	O95837	355 aa		14.07	□□□□□ -0.16
SREBF1-223	ENST00000584760	ZDHHC11B	P0C7U3	371 aa		14.07	□□□□□ -0.16

Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms