RNA–Protein interactions for RNA: ENST00000584377.5

CSNK1D-222, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 2,891 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-222	ENST00000584377	SPARCL1	Q14515	664 aa		13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	MSS51	Q4VC12	460 aa		13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	MAP1S	Q66K74	1059 aa	Predicted RBP	13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	ILDR2	Q71H61	639 aa		13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	IFNLR1	Q8IU57	520 aa	Predicted RBP	13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	SPATA18	Q8TC71	538 aa		13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	DENND1A	Q8TEH3	1009 aa		13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	GRAMD1A	Q96CP6	724 aa		13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	PHACTR1	Q9C0D0	580 aa		13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	RSAD1	Q9HA92	442 aa		13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	BARX2	Q9UMQ3	279 aa	Predicted RBP	13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	PIK3R2	O00459	728 aa		13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	RBP3	P10745	1247 aa		13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	CA4	P22748	312 aa		13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	PCK1	P35558	622 aa		13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	NDST1	P52848	882 aa		13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	SLC18A1	P54219	525 aa		13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	MTM1	Q13496	603 aa		13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	RASA2	Q15283	850 aa		13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	GALNTL6	Q49A17	601 aa		13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	EFHC2	Q5JST6	749 aa		13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	MTHFD1L	Q6UB35	978 aa		13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	CDCA5	Q96FF9	252 aa		13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	PEBP4	Q96S96	227 aa		13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	EPAS1	Q99814	870 aa		13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	ECT2	Q9H8V3	914 aa		13.81	□□□□□ -0.2
CSNK1D-222	ENST00000584377	TMEM63A	O94886	807 aa		13.8	□□□□□ -0.2
CSNK1D-222	ENST00000584377	KRT16	P08779	473 aa		13.8	□□□□□ -0.2
CSNK1D-222	ENST00000584377	RPA3	P35244	121 aa	Predicted RBP	13.8	□□□□□ -0.2
CSNK1D-222	ENST00000584377	BASP1	P80723	227 aa	Known RBP	13.8	□□□□□ -0.2
CSNK1D-222	ENST00000584377	SH3PXD2A	Q5TCZ1	1133 aa		13.8	□□□□□ -0.2
CSNK1D-222	ENST00000584377	TRIM68	Q6AZZ1	485 aa		13.8	□□□□□ -0.2
CSNK1D-222	ENST00000584377	C3orf62	Q6ZUJ4	267 aa		13.8	□□□□□ -0.2
CSNK1D-222	ENST00000584377	LINC01465	Q8N7H1	131 aa		13.8	□□□□□ -0.2
CSNK1D-222	ENST00000584377	KLHL23	Q8NBE8	558 aa		13.8	□□□□□ -0.2
CSNK1D-222	ENST00000584377	NLRP7	Q8WX94	980 aa		13.8	□□□□□ -0.2
CSNK1D-222	ENST00000584377	RMDN2	Q96LZ7	410 aa		13.8	□□□□□ -0.2
CSNK1D-222	ENST00000584377	CNPY3	Q9BT09	278 aa		13.8	□□□□□ -0.2
CSNK1D-222	ENST00000584377	MAK16	Q9BXY0	300 aa	Known RBP	13.8	□□□□□ -0.2
CSNK1D-222	ENST00000584377	RXFP1	Q9HBX9	757 aa		13.8	□□□□□ -0.2
CSNK1D-222	ENST00000584377	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	13.8	□□□□□ -0.2
CSNK1D-222	ENST00000584377	XPO7	Q9UIA9	1087 aa	Known RBP	13.8	□□□□□ -0.2
CSNK1D-222	ENST00000584377	RABGEF1	Q9UJ41	708 aa		13.8	□□□□□ -0.2
CSNK1D-222	ENST00000584377		A0A1W2PPM1	405 aa		13.8	□□□□□ -0.2
CSNK1D-222	ENST00000584377	TCRBV7S3A2	A0A539	114 aa		13.8	□□□□□ -0.2
CSNK1D-222	ENST00000584377	ZNF286B	P0CG31	522 aa		13.8	□□□□□ -0.2
CSNK1D-222	ENST00000584377	GPD1	P21695	349 aa		13.8	□□□□□ -0.2
CSNK1D-222	ENST00000584377	CDH6	P55285	790 aa		13.8	□□□□□ -0.2
CSNK1D-222	ENST00000584377	RBP5	P82980	135 aa		13.8	□□□□□ -0.2
CSNK1D-222	ENST00000584377	MXRA7	P84157	204 aa		13.8	□□□□□ -0.2
CSNK1D-222	ENST00000584377	INCA1	Q0VD86	236 aa		13.8	□□□□□ -0.2
CSNK1D-222	ENST00000584377	MMRN1	Q13201	1228 aa		13.8	□□□□□ -0.2
CSNK1D-222	ENST00000584377	DNAJC3	Q13217	504 aa		13.8	□□□□□ -0.2
CSNK1D-222	ENST00000584377	EFTUD2	Q15029	972 aa	Known RBP eCLIP	13.8	□□□□□ -0.2	1e-6	■■□□□ 14.1
CSNK1D-222	ENST00000584377	KYAT1	Q16773	422 aa		13.8	□□□□□ -0.2
CSNK1D-222	ENST00000584377	BBS9	Q3SYG4	887 aa		13.8	□□□□□ -0.2
CSNK1D-222	ENST00000584377	OR6B2	Q6IFH4	312 aa		13.8	□□□□□ -0.2
CSNK1D-222	ENST00000584377	PDIK1L	Q8N165	341 aa		13.8	□□□□□ -0.2
CSNK1D-222	ENST00000584377	FITM2	Q8N6M3	262 aa		13.8	□□□□□ -0.2
CSNK1D-222	ENST00000584377	FBXO36	Q8NEA4	188 aa		13.8	□□□□□ -0.2
CSNK1D-222	ENST00000584377	B4GALNT2	Q8NHY0	566 aa		13.8	□□□□□ -0.2
CSNK1D-222	ENST00000584377	KCNV2	Q8TDN2	545 aa		13.8	□□□□□ -0.2
CSNK1D-222	ENST00000584377	TEKT4	Q8WW24	435 aa		13.8	□□□□□ -0.2
CSNK1D-222	ENST00000584377	PIDD1	Q9HB75	910 aa		13.8	□□□□□ -0.2
CSNK1D-222	ENST00000584377	DPP3	Q9NY33	737 aa		13.8	□□□□□ -0.2
CSNK1D-222	ENST00000584377	TSPAN16	Q9UKR8	245 aa		13.8	□□□□□ -0.2
CSNK1D-222	ENST00000584377	ITGA11	Q9UKX5	1188 aa		13.8	□□□□□ -0.2
CSNK1D-222	ENST00000584377	STK38L	Q9Y2H1	464 aa		13.8	□□□□□ -0.2
CSNK1D-222	ENST00000584377		E5RJQ4	531 aa		13.79	□□□□□ -0.2
CSNK1D-222	ENST00000584377	PDGFRA	P16234	1089 aa		13.79	□□□□□ -0.2
CSNK1D-222	ENST00000584377	KIF2B	Q8N4N8	673 aa		13.79	□□□□□ -0.2
CSNK1D-222	ENST00000584377	ZFAND2B	Q8WV99	257 aa		13.79	□□□□□ -0.2
CSNK1D-222	ENST00000584377	RXFP2	Q8WXD0	754 aa		13.79	□□□□□ -0.2
CSNK1D-222	ENST00000584377	SPOCK2	Q92563	424 aa		13.79	□□□□□ -0.2
CSNK1D-222	ENST00000584377	KLHL29	Q96CT2	875 aa		13.79	□□□□□ -0.2
CSNK1D-222	ENST00000584377	ACAP3	Q96P50	834 aa		13.79	□□□□□ -0.2
CSNK1D-222	ENST00000584377	WDR83	Q9BRX9	315 aa	Known RBP	13.79	□□□□□ -0.2
CSNK1D-222	ENST00000584377	FETUB	Q9UGM5	382 aa		13.79	□□□□□ -0.2
CSNK1D-222	ENST00000584377	C2CD2	Q9Y426	696 aa		13.79	□□□□□ -0.2
CSNK1D-222	ENST00000584377	DICER1	Q9UPY3	1922 aa	Known RBP	13.79	□□□□□ -0.2
CSNK1D-222	ENST00000584377	C2CD4B	A6NLJ0	364 aa		13.79	□□□□□ -0.2
CSNK1D-222	ENST00000584377		E7ESA3	106 aa		13.79	□□□□□ -0.2
CSNK1D-222	ENST00000584377	SMAP	O00193	183 aa		13.79	□□□□□ -0.2
CSNK1D-222	ENST00000584377	MAP3K13	O43283	966 aa		13.79	□□□□□ -0.2
CSNK1D-222	ENST00000584377	PIAS1	O75925	651 aa		13.79	□□□□□ -0.2
CSNK1D-222	ENST00000584377	KRT4	P19013	534 aa		13.79	□□□□□ -0.2
CSNK1D-222	ENST00000584377	CYP3A5	P20815	502 aa		13.79	□□□□□ -0.2
CSNK1D-222	ENST00000584377	MSH2	P43246	934 aa		13.79	□□□□□ -0.2
CSNK1D-222	ENST00000584377	NRL	P54845	237 aa		13.79	□□□□□ -0.2
CSNK1D-222	ENST00000584377	ROR1	Q01973	937 aa		13.79	□□□□□ -0.2
CSNK1D-222	ENST00000584377	BNIP1	Q12981	228 aa		13.79	□□□□□ -0.2
CSNK1D-222	ENST00000584377	CDO1	Q16878	200 aa		13.79	□□□□□ -0.2
CSNK1D-222	ENST00000584377	C15orf59	Q2T9L4	293 aa	Predicted RBP	13.79	□□□□□ -0.2
CSNK1D-222	ENST00000584377	RNF43	Q68DV7	783 aa		13.79	□□□□□ -0.2
CSNK1D-222	ENST00000584377	ANO7	Q6IWH7	933 aa		13.79	□□□□□ -0.2
CSNK1D-222	ENST00000584377	TRNP1	Q6NT89	227 aa		13.79	□□□□□ -0.2
CSNK1D-222	ENST00000584377	TAPT1	Q6NXT6	567 aa		13.79	□□□□□ -0.2
CSNK1D-222	ENST00000584377	LCLAT1	Q6UWP7	414 aa		13.79	□□□□□ -0.2
CSNK1D-222	ENST00000584377	NPNT	Q6UXI9	565 aa		13.79	□□□□□ -0.2
CSNK1D-222	ENST00000584377	FAM183BP	Q6ZVS7	135 aa		13.79	□□□□□ -0.2

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