RNA–Protein interactions for RNA: ENST00000582923.1

PDLIM1P2-201, Transcript of PDZ and LIM domain 1 pseudogene 2, humanhuman

BASIC

Gene PDLIM1P2, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P2-201ENST00000582923 ZBED1O96006 694 aa9.56□□□□□ -0.88
PDLIM1P2-201ENST00000582923 USP17L7P0C7H9 530 aa9.56□□□□□ -0.88
PDLIM1P2-201ENST00000582923 TMEM253P0C7T8 217 aa9.56□□□□□ -0.88
PDLIM1P2-201ENST00000582923 POU3F3P20264 500 aaPredicted RBP9.56□□□□□ -0.88
PDLIM1P2-201ENST00000582923 RRM1P23921 792 aa9.56□□□□□ -0.88
PDLIM1P2-201ENST00000582923 HOXA9P31269 272 aa9.56□□□□□ -0.88
PDLIM1P2-201ENST00000582923 GALCP54803 685 aa9.56□□□□□ -0.88
PDLIM1P2-201ENST00000582923 USP46P62068 366 aa9.56□□□□□ -0.88
PDLIM1P2-201ENST00000582923 MTMR3Q13615 1198 aa9.56□□□□□ -0.88
PDLIM1P2-201ENST00000582923 RAB41Q5JT25 222 aa9.56□□□□□ -0.88
PDLIM1P2-201ENST00000582923 RARS2Q5T160 578 aaKnown RBP9.56□□□□□ -0.88
PDLIM1P2-201ENST00000582923 FAM102AQ5T9C2 384 aaPredicted RBP9.56□□□□□ -0.88
PDLIM1P2-201ENST00000582923 TMEM110Q86TL2 294 aa9.56□□□□□ -0.88
PDLIM1P2-201ENST00000582923 XYLT1Q86Y38 959 aa9.56□□□□□ -0.88
PDLIM1P2-201ENST00000582923 ZDHHC17Q8IUH5 632 aa9.56□□□□□ -0.88
PDLIM1P2-201ENST00000582923 SCUBE3Q8IX30 993 aa9.56□□□□□ -0.88
PDLIM1P2-201ENST00000582923 SCAMP5Q8TAC9 235 aa9.56□□□□□ -0.88
PDLIM1P2-201ENST00000582923 CLEC4CQ8WTT0 213 aa9.56□□□□□ -0.88
PDLIM1P2-201ENST00000582923 SMG7Q92540 1137 aaKnown RBP9.56□□□□□ -0.88
PDLIM1P2-201ENST00000582923 PSMG2Q969U7 264 aa9.56□□□□□ -0.88
PDLIM1P2-201ENST00000582923 FAM149B1Q96BN6 582 aa9.56□□□□□ -0.88
PDLIM1P2-201ENST00000582923 ZNF512Q96ME7 567 aaPredicted RBP9.56□□□□□ -0.88
PDLIM1P2-201ENST00000582923 CDX2Q99626 313 aaPredicted RBP9.56□□□□□ -0.88
PDLIM1P2-201ENST00000582923 CORO1BQ9BR76 489 aa9.56□□□□□ -0.88
PDLIM1P2-201ENST00000582923 APOL5Q9BWW9 433 aa9.56□□□□□ -0.88
PDLIM1P2-201ENST00000582923 PACSIN1Q9BY11 444 aa9.56□□□□□ -0.88
PDLIM1P2-201ENST00000582923 THAP2Q9H0W7 228 aa9.56□□□□□ -0.88
PDLIM1P2-201ENST00000582923 ISCUQ9H1K1 167 aa9.56□□□□□ -0.88
PDLIM1P2-201ENST00000582923 CNGB3Q9NQW8 809 aa9.56□□□□□ -0.88
PDLIM1P2-201ENST00000582923 ASAH2Q9NR71 780 aa9.56□□□□□ -0.88
PDLIM1P2-201ENST00000582923 METTL5Q9NRN9 209 aaKnown RBP9.56□□□□□ -0.88
PDLIM1P2-201ENST00000582923 CLDND1Q9NY35 253 aa9.56□□□□□ -0.88
PDLIM1P2-201ENST00000582923 WDR35Q9P2L0 1181 aa9.56□□□□□ -0.88
PDLIM1P2-201ENST00000582923 UXTQ9UBK9 157 aaPredicted RBP9.56□□□□□ -0.88
PDLIM1P2-201ENST00000582923 PCDHA13Q9Y5I0 950 aa9.56□□□□□ -0.88
PDLIM1P2-201ENST00000582923 SCINQ9Y6U3 715 aa9.56□□□□□ -0.88
PDLIM1P2-201ENST00000582923 CCDC195A0A1B0GUA6 201 aa9.55□□□□□ -0.88
PDLIM1P2-201ENST00000582923 NCK2O43639 380 aa9.55□□□□□ -0.88
PDLIM1P2-201ENST00000582923 GABBR2O75899 941 aa9.55□□□□□ -0.88
PDLIM1P2-201ENST00000582923 MYL4P12829 197 aa9.55□□□□□ -0.88
PDLIM1P2-201ENST00000582923 GABRB2P47870 512 aa9.55□□□□□ -0.88
PDLIM1P2-201ENST00000582923 RPL34P49207 117 aaKnown RBP9.55□□□□□ -0.88
PDLIM1P2-201ENST00000582923 VAV2P52735 878 aa9.55□□□□□ -0.88
PDLIM1P2-201ENST00000582923 DAOAP59103 153 aa9.55□□□□□ -0.88
PDLIM1P2-201ENST00000582923 MRPS5P82675 430 aaKnown RBP9.55□□□□□ -0.88
PDLIM1P2-201ENST00000582923 SLC6A3Q01959 620 aa9.55□□□□□ -0.88
PDLIM1P2-201ENST00000582923 TAF10Q12962 218 aa9.55□□□□□ -0.88
PDLIM1P2-201ENST00000582923 PTP4A2Q12974 167 aa9.55□□□□□ -0.88
PDLIM1P2-201ENST00000582923 SKIV2LQ15477 1246 aaKnown RBP9.55□□□□□ -0.88
PDLIM1P2-201ENST00000582923 EFHC1Q5JVL4 640 aa9.55□□□□□ -0.88
PDLIM1P2-201ENST00000582923 ANKRD54Q6NXT1 300 aa9.55□□□□□ -0.88
PDLIM1P2-201ENST00000582923 TMC5Q6UXY8 1006 aa9.55□□□□□ -0.88
PDLIM1P2-201ENST00000582923 DNAJB7Q7Z6W7 309 aaPredicted RBP9.55□□□□□ -0.88
PDLIM1P2-201ENST00000582923 ARHGAP18Q8N392 663 aa9.55□□□□□ -0.88
PDLIM1P2-201ENST00000582923 C12orf76Q8N812 135 aaPredicted RBP9.55□□□□□ -0.88
PDLIM1P2-201ENST00000582923 C3orf20Q8ND61 904 aa9.55□□□□□ -0.88
PDLIM1P2-201ENST00000582923 PDZD8Q8NEN9 1154 aa9.55□□□□□ -0.88
PDLIM1P2-201ENST00000582923 IRGQQ8WZA9 623 aa9.55□□□□□ -0.88
PDLIM1P2-201ENST00000582923 TRMT2BQ96GJ1 504 aaKnown RBP9.55□□□□□ -0.88
PDLIM1P2-201ENST00000582923 PIWIL1Q96J94 861 aaKnown RBP9.55□□□□□ -0.88
PDLIM1P2-201ENST00000582923 VCPIP1Q96JH7 1222 aa9.55□□□□□ -0.88
PDLIM1P2-201ENST00000582923 TRIM62Q9BVG3 475 aa9.55□□□□□ -0.88
PDLIM1P2-201ENST00000582923 SELENOOQ9BVL4 669 aa9.55□□□□□ -0.88
PDLIM1P2-201ENST00000582923 TTLL2Q9BWV7 592 aa9.55□□□□□ -0.88
PDLIM1P2-201ENST00000582923 PRKD2Q9BZL6 878 aa9.55□□□□□ -0.88
PDLIM1P2-201ENST00000582923 COMMD8Q9NX08 183 aa9.55□□□□□ -0.88
PDLIM1P2-201ENST00000582923 GMIPQ9P107 970 aa9.55□□□□□ -0.88
PDLIM1P2-201ENST00000582923 CTTNBP2NLQ9P2B4 639 aa9.55□□□□□ -0.88
PDLIM1P2-201ENST00000582923 INTUQ9ULD6 942 aa9.55□□□□□ -0.88
PDLIM1P2-201ENST00000582923 SCML2Q9UQR0 700 aa9.55□□□□□ -0.88
PDLIM1P2-201ENST00000582923 REXO2Q9Y3B8 237 aaKnown RBP9.55□□□□□ -0.88
PDLIM1P2-201ENST00000582923 ADGRG1Q9Y653 693 aa9.55□□□□□ -0.88
PDLIM1P2-201ENST00000582923 CHD9Q3L8U1 2897 aa9.55□□□□□ -0.88
PDLIM1P2-201ENST00000582923 NCANO14594 1321 aa9.55□□□□□ -0.88
PDLIM1P2-201ENST00000582923 MTCL1Q9Y4B5 1905 aaKnown RBP9.54□□□□□ -0.88
PDLIM1P2-201ENST00000582923 YJEFN3A6XGL0 299 aa9.54□□□□□ -0.88
PDLIM1P2-201ENST00000582923 E7ENQ6 273 aa9.54□□□□□ -0.88
PDLIM1P2-201ENST00000582923 CAPN9O14815 690 aa9.54□□□□□ -0.88
PDLIM1P2-201ENST00000582923 ZSCAN12O43309 604 aa9.54□□□□□ -0.88
PDLIM1P2-201ENST00000582923 HSF2BPO75031 334 aa9.54□□□□□ -0.88
PDLIM1P2-201ENST00000582923 TBX10O75333 385 aa9.54□□□□□ -0.88
PDLIM1P2-201ENST00000582923 DAB1O75553 588 aa9.54□□□□□ -0.88
PDLIM1P2-201ENST00000582923 GRAP2O75791 330 aa9.54□□□□□ -0.88
PDLIM1P2-201ENST00000582923 GJB6O95452 261 aa9.54□□□□□ -0.88
PDLIM1P2-201ENST00000582923 FGF19O95750 216 aa9.54□□□□□ -0.88
PDLIM1P2-201ENST00000582923 ABL1P00519 1130 aa9.54□□□□□ -0.88
PDLIM1P2-201ENST00000582923 LTFP02788 710 aa9.54□□□□□ -0.88
PDLIM1P2-201ENST00000582923 POU2F2P09086 479 aa9.54□□□□□ -0.88
PDLIM1P2-201ENST00000582923 HMGA1P17096 107 aaKnown RBP9.54□□□□□ -0.88
PDLIM1P2-201ENST00000582923 PTPN2P17706 415 aa9.54□□□□□ -0.88
PDLIM1P2-201ENST00000582923 DEKP35659 375 aaKnown RBP9.54□□□□□ -0.88
PDLIM1P2-201ENST00000582923 SCNN1AP37088 669 aa9.54□□□□□ -0.88
PDLIM1P2-201ENST00000582923 GSCP56915 257 aaPredicted RBP9.54□□□□□ -0.88
PDLIM1P2-201ENST00000582923 RNASE9P60153 205 aaKnown RBP9.54□□□□□ -0.88
PDLIM1P2-201ENST00000582923 YWHAGP61981 247 aaKnown RBP eCLIP9.54□□□□□ -0.88
PDLIM1P2-201ENST00000582923 GPC5P78333 572 aa9.54□□□□□ -0.88
PDLIM1P2-201ENST00000582923 KIF5AQ12840 1032 aa9.54□□□□□ -0.88
PDLIM1P2-201ENST00000582923 ADAM15Q13444 863 aa9.54□□□□□ -0.88
PDLIM1P2-201ENST00000582923 KCNC3Q14003 757 aa9.54□□□□□ -0.88
PDLIM1P2-201ENST00000582923 ZNF268Q14587 947 aaPredicted RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms