RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 RRN3Q9NYV6 651 aa4.42□□□□□ -1.7
SMG8-205ENST00000580798 MOCS1Q9NZB8 636 aa4.42□□□□□ -1.7
SMG8-205ENST00000580798 AIPL1Q9NZN9 384 aa4.42□□□□□ -1.7
SMG8-205ENST00000580798 WDR35Q9P2L0 1181 aa4.42□□□□□ -1.7
SMG8-205ENST00000580798 DUSP12Q9UNI6 340 aa4.42□□□□□ -1.7
SMG8-205ENST00000580798 TRAF3IP3Q9Y228 551 aa4.42□□□□□ -1.7
SMG8-205ENST00000580798 SQORQ9Y6N5 450 aa4.42□□□□□ -1.7
SMG8-205ENST00000580798 FRMPD2Q68DX3 1309 aaPredicted RBP4.42□□□□□ -1.7
SMG8-205ENST00000580798 KIF16BQ96L93 1317 aa4.42□□□□□ -1.7
SMG8-205ENST00000580798 CCDC196A0A1B0GTZ2 297 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 H0YHG0 523 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 BOLA2-SMG1P6H3BVE0 249 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 RTCAO00442 366 aaKnown RBP4.41□□□□□ -1.7
SMG8-205ENST00000580798 NDC80O14777 642 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 PMM2O15305 246 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 RASA4O43374 803 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 DKC1O60832 514 aaKnown RBP eCLIP4.41□□□□□ -1.7
SMG8-205ENST00000580798 KRT38O76015 456 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 POMCP01189 267 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 THEGLP0DJG4 465 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 SKILP12757 684 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 P4HA1P13674 534 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 FPR1P21462 350 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 MUTP22033 750 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 GCSHP23434 173 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 GALNSP34059 522 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 GRK6P43250 576 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 PER3P56645 1201 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 UBXN1Q04323 297 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 ZBTB16Q05516 673 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 PPP3CAQ08209 521 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 UBXN2BQ14CS0 331 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 CLUL1Q15846 466 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 CCDC152Q4G0S7 254 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 MUM1L1Q5H9M0 696 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 TOR2AQ5JU69 321 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 RNF219Q5W0B1 726 aaPredicted RBP4.41□□□□□ -1.7
SMG8-205ENST00000580798 ZNF529Q6P280 563 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 XRRA1Q6P2D8 792 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 CRTC1Q6UUV9 634 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 LDHAL6AQ6ZMR3 332 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 SYNE3Q6ZMZ3 975 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 RAPH1Q70E73 1250 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 KCNK18Q7Z418 384 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 AFAP1L2Q8N4X5 818 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 AFAP1Q8N556 730 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 PARD3BQ8TEW8 1205 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 LMBR1Q8WVP7 490 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 RUFY2Q8WXA3 655 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 ZNF75CPQ92670 426 aaPredicted RBP4.41□□□□□ -1.7
SMG8-205ENST00000580798 DPF1Q92782 380 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 FATE1Q969F0 183 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 NACC2Q96BF6 587 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 CLMNQ96JQ2 1002 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 ORAI2Q96SN7 254 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 AIFM2Q9BRQ8 373 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 ADPGKQ9BRR6 497 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 ISCA1Q9BUE6 129 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 SENP6Q9GZR1 1112 aaPredicted RBP4.41□□□□□ -1.7
SMG8-205ENST00000580798 GALNT9Q9HCQ5 603 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 VTA1Q9NP79 307 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 RBM12Q9NTZ6 932 aaKnown RBP4.41□□□□□ -1.7
SMG8-205ENST00000580798 ABCF3Q9NUQ8 709 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 TMEM74BQ9NUR3 256 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 NFKBIL1Q9UBC1 381 aaPredicted RBP4.41□□□□□ -1.7
SMG8-205ENST00000580798 SLC23A1Q9UHI7 598 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 KCNE5Q9UJ90 142 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 AJAP1Q9UKB5 411 aaPredicted RBP4.41□□□□□ -1.7
SMG8-205ENST00000580798 MTF2Q9Y483 593 aaPredicted RBP4.41□□□□□ -1.7
SMG8-205ENST00000580798 KIF3AQ9Y496 699 aa4.41□□□□□ -1.7
SMG8-205ENST00000580798 A0A1B0GVC2 190 aa4.4□□□□□ -1.71
SMG8-205ENST00000580798 GOLGA8AA7E2F4 631 aa4.4□□□□□ -1.71
SMG8-205ENST00000580798 TLR5O60602 858 aa4.4□□□□□ -1.71
SMG8-205ENST00000580798 TSC22D2O75157 780 aa4.4□□□□□ -1.71
SMG8-205ENST00000580798 GPANK1O95872 356 aa4.4□□□□□ -1.71
SMG8-205ENST00000580798 APOA4P06727 396 aa4.4□□□□□ -1.71
SMG8-205ENST00000580798 MTHFD1P11586 935 aaKnown RBP4.4□□□□□ -1.71
SMG8-205ENST00000580798 SFTPCP11686 197 aa4.4□□□□□ -1.71
SMG8-205ENST00000580798 TNNT1P13805 278 aa4.4□□□□□ -1.71
SMG8-205ENST00000580798 CCND1P24385 295 aa4.4□□□□□ -1.71
SMG8-205ENST00000580798 PCSK1P29120 753 aa4.4□□□□□ -1.71
SMG8-205ENST00000580798 GNL1P36915 607 aaPredicted RBP4.4□□□□□ -1.71
SMG8-205ENST00000580798 MXI1P50539 228 aa4.4□□□□□ -1.71
SMG8-205ENST00000580798 LIMK1P53667 647 aa4.4□□□□□ -1.71
SMG8-205ENST00000580798 SCAND1P57086 179 aa4.4□□□□□ -1.71
SMG8-205ENST00000580798 SRSF2Q01130 221 aaKnown RBP4.4□□□□□ -1.71
SMG8-205ENST00000580798 TRDNQ13061 729 aa4.4□□□□□ -1.71
SMG8-205ENST00000580798 IKQ13123 557 aaPredicted RBP4.4□□□□□ -1.71
SMG8-205ENST00000580798 PRPF4BQ13523 1007 aaKnown RBP4.4□□□□□ -1.71
SMG8-205ENST00000580798 GBX1Q14549 363 aa4.4□□□□□ -1.71
SMG8-205ENST00000580798 NOMO1Q15155 1222 aa4.4□□□□□ -1.71
SMG8-205ENST00000580798 CYP2A13Q16696 494 aa4.4□□□□□ -1.71
SMG8-205ENST00000580798 PTPN21Q16825 1174 aa4.4□□□□□ -1.71
SMG8-205ENST00000580798 AKNAD1Q5T1N1 836 aa4.4□□□□□ -1.71
SMG8-205ENST00000580798 OTUD7BQ6GQQ9 843 aa4.4□□□□□ -1.71
SMG8-205ENST00000580798 GALNT17Q6IS24 598 aa4.4□□□□□ -1.71
SMG8-205ENST00000580798 RETSATQ6NUM9 610 aa4.4□□□□□ -1.71
SMG8-205ENST00000580798 CNSTQ6PJW8 725 aa4.4□□□□□ -1.71
SMG8-205ENST00000580798 FAM180AQ6UWF9 173 aa4.4□□□□□ -1.71
SMG8-205ENST00000580798 GBP6Q6ZN66 633 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms