RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 NOX5Q96PH1 765 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 LENG8Q96PV6 779 aaPredicted RBP6.89□□□□□ -1.31
COPS3-216ENST00000579716 TSG101Q99816 390 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 BCL7BQ9BQE9 202 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 CNPPD1Q9BV87 410 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 NFKBIZQ9BYH8 718 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 SLC6A17Q9H1V8 727 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 BHMT2Q9H2M3 363 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 DPH5Q9H2P9 285 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 MID1IP1Q9NPA3 183 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 RPRD1BQ9NQG5 326 aaKnown RBP6.89□□□□□ -1.31
COPS3-216ENST00000579716 DMRT3Q9NQL9 472 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 SDHAF3Q9NRP4 125 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 SNTG1Q9NSN8 517 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 MOCS1Q9NZB8 636 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 COQ3Q9NZJ6 369 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 ZNRF3Q9ULT6 936 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 PCDHGB4Q9UN71 923 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 STK38LQ9Y2H1 464 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 KCTD3Q9Y597 815 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.89□□□□□ -1.31
COPS3-216ENST00000579716 ZNF335Q9H4Z2 1342 aaPredicted RBP6.89□□□□□ -1.31
COPS3-216ENST00000579716 ROCK1Q13464 1354 aa6.89□□□□□ -1.31
COPS3-216ENST00000579716 A0A1W2PQH9 124 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 FITM1A5D6W6 292 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 NUDT19A8MXV4 375 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 TAF4O00268 1085 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 NCK2O43639 380 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 TUSC2O75896 110 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 TMEM63AO94886 807 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 CHRNA1P02708 482 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 JMJD7P0C870 316 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 FGFR1P11362 822 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 PECAM1P16284 738 aaPredicted RBP6.88□□□□□ -1.31
COPS3-216ENST00000579716 PRKACBP22694 351 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 STAT5AP42229 794 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 ACAA2P42765 397 aaKnown RBP6.88□□□□□ -1.31
COPS3-216ENST00000579716 LIG3P49916 1009 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 YBEYP58557 167 aaPredicted RBP6.88□□□□□ -1.31
COPS3-216ENST00000579716 EIF4A1P60842 406 aaKnown RBP6.88□□□□□ -1.31
COPS3-216ENST00000579716 SSTP61278 116 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 KCNJ10P78508 379 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 EXOSC9Q06265 439 aaKnown RBP6.88□□□□□ -1.31
COPS3-216ENST00000579716 CHAF1BQ13112 559 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 COTL1Q14019 142 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 GNA13Q14344 377 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 LASP1Q14847 261 aaKnown RBP6.88□□□□□ -1.31
COPS3-216ENST00000579716 EFTUD2Q15029 972 aaKnown RBP eCLIP6.88□□□□□ -1.31
COPS3-216ENST00000579716 CEP78Q5JTW2 689 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 ATPAF1Q5TC12 328 aaPredicted RBP6.88□□□□□ -1.31
COPS3-216ENST00000579716 THOC7Q6I9Y2 204 aaKnown RBP6.88□□□□□ -1.31
COPS3-216ENST00000579716 MIS18BP1Q6P0N0 1132 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 SASS6Q6UVJ0 657 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 NLRC3Q7RTR2 1065 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 STK32CQ86UX6 486 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 TMEM200AQ86VY9 491 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 MICU3Q86XE3 530 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 RFX6Q8HWS3 928 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 CD302Q8IX05 232 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 CDH26Q8IXH8 852 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 KIAA2013Q8IYS2 634 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 SPARTQ8N0X7 666 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 SMC1BQ8NDV3 1235 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 BCAS4Q8TDM0 211 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 DDI1Q8WTU0 396 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 DEPDC1BQ8WUY9 529 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 TCP11Q8WWU5 503 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 PPP1R14BQ96C90 147 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 VWCEQ96DN2 955 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 MSANTD3Q96H12 275 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 MPHOSPH9Q99550 1183 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 SH3GL2Q99962 352 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 PYM1Q9BRP8 204 aaKnown RBP6.88□□□□□ -1.31
COPS3-216ENST00000579716 SORBS1Q9BX66 1292 aaKnown RBP6.88□□□□□ -1.31
COPS3-216ENST00000579716 LRRC3Q9BY71 257 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 MTMR12Q9C0I1 747 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 ZCCHC4Q9H5U6 513 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 TRIM39Q9HCM9 518 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 POLE3Q9NRF9 147 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 GPATCH2Q9NW75 528 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 OGFRQ9NZT2 677 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 ADAM30Q9UKF2 790 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 SATB2Q9UPW6 733 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 INVSQ9Y283 1065 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 TLR6Q9Y2C9 796 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 PCDHGB2Q9Y5G2 931 aa6.88□□□□□ -1.31
COPS3-216ENST00000579716 TNIKQ9UKE5 1360 aa6.87□□□□□ -1.31
COPS3-216ENST00000579716 TRAV20A0A0B4J274 112 aa6.87□□□□□ -1.31
COPS3-216ENST00000579716 A0A0U1RQK1 487 aa6.87□□□□□ -1.31
COPS3-216ENST00000579716 GOLGA6L7A0A1B0GV03 622 aa6.87□□□□□ -1.31
COPS3-216ENST00000579716 ZNF320A2RRD8 509 aa6.87□□□□□ -1.31
COPS3-216ENST00000579716 E9PMD0 336 aa6.87□□□□□ -1.31
COPS3-216ENST00000579716 UBE2CO00762 179 aa6.87□□□□□ -1.31
COPS3-216ENST00000579716 TRDMT1O14717 391 aaKnown RBP6.87□□□□□ -1.31
COPS3-216ENST00000579716 SCAMP1O15126 338 aa6.87□□□□□ -1.31
COPS3-216ENST00000579716 EXOC3O60645 756 aa6.87□□□□□ -1.31
COPS3-216ENST00000579716 NIPSNAP2O75323 286 aa6.87□□□□□ -1.31
COPS3-216ENST00000579716 ERAL1O75616 437 aaKnown RBP6.87□□□□□ -1.31
COPS3-216ENST00000579716 IFNB1P01574 187 aa6.87□□□□□ -1.31
COPS3-216ENST00000579716 KRT14P02533 472 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms