RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 ZNF77Q15935 545 aa25.26■■□□□ 1.63
LIMD2-207ENST00000579329 EXOC3L4Q17RC7 722 aa25.26■■□□□ 1.63
LIMD2-207ENST00000579329 HSP90AA4PQ58FG1 418 aa25.26■■□□□ 1.63
LIMD2-207ENST00000579329 SNX30Q5VWJ9 437 aa25.26■■□□□ 1.63
LIMD2-207ENST00000579329 TRIM65Q6PJ69 517 aa25.26■■□□□ 1.63
LIMD2-207ENST00000579329 ZNF852Q6ZMS4 543 aa25.26■■□□□ 1.63
LIMD2-207ENST00000579329 PJA1Q8NG27 643 aa25.26■■□□□ 1.63
LIMD2-207ENST00000579329 MSANTD3Q96H12 275 aa25.26■■□□□ 1.63
LIMD2-207ENST00000579329 FAM81BQ96LP2 452 aa25.26■■□□□ 1.63
LIMD2-207ENST00000579329 KREMEN1Q96MU8 473 aa25.26■■□□□ 1.63
LIMD2-207ENST00000579329 TUBGCP2Q9BSJ2 902 aa25.26■■□□□ 1.63
LIMD2-207ENST00000579329 FOXQ1Q9C009 403 aa25.26■■□□□ 1.63
LIMD2-207ENST00000579329 SAMSN1Q9NSI8 373 aaKnown RBP25.26■■□□□ 1.63
LIMD2-207ENST00000579329 TMEM63CQ9P1W3 806 aa25.26■■□□□ 1.63
LIMD2-207ENST00000579329 HESX1Q9UBX0 185 aa25.26■■□□□ 1.63
LIMD2-207ENST00000579329 CHORDC1Q9UHD1 332 aaPredicted RBP25.26■■□□□ 1.63
LIMD2-207ENST00000579329 TSPAN16Q9UKR8 245 aa25.26■■□□□ 1.63
LIMD2-207ENST00000579329 MRPS17Q9Y2R5 130 aaKnown RBP25.26■■□□□ 1.63
LIMD2-207ENST00000579329 SIT1Q9Y3P8 196 aa25.26■■□□□ 1.63
LIMD2-207ENST00000579329 PIAS3Q9Y6X2 628 aa25.26■■□□□ 1.63
LIMD2-207ENST00000579329 FAM186AA6NE01 2351 aa25.26■■□□□ 1.63
LIMD2-207ENST00000579329 TUBP50607 506 aa25.25■■□□□ 1.63
LIMD2-207ENST00000579329 KPNA1P52294 538 aaPredicted RBP25.25■■□□□ 1.63
LIMD2-207ENST00000579329 BCAT1P54687 386 aa25.25■■□□□ 1.63
LIMD2-207ENST00000579329 MLLT6P55198 1093 aaPredicted RBP25.25■■□□□ 1.63
LIMD2-207ENST00000579329 MTF1Q14872 753 aa25.25■■□□□ 1.63
LIMD2-207ENST00000579329 HECTD3Q5T447 861 aa25.25■■□□□ 1.63
LIMD2-207ENST00000579329 ENOSF1Q7L5Y1 443 aa25.25■■□□□ 1.63
LIMD2-207ENST00000579329 RBBP8NLQ8NC74 664 aaPredicted RBP25.25■■□□□ 1.63
LIMD2-207ENST00000579329 RIN3Q8TB24 985 aa25.25■■□□□ 1.63
LIMD2-207ENST00000579329 SH3RF2Q8TEC5 729 aa25.25■■□□□ 1.63
LIMD2-207ENST00000579329 UBXN6Q9BZV1 441 aa25.25■■□□□ 1.63
LIMD2-207ENST00000579329 NDST4Q9H3R1 872 aa25.25■■□□□ 1.63
LIMD2-207ENST00000579329 C8orf33Q9H7E9 229 aaPredicted RBP25.25■■□□□ 1.63
LIMD2-207ENST00000579329 LTB4R2Q9NPC1 389 aa25.25■■□□□ 1.63
LIMD2-207ENST00000579329 UBE2TQ9NPD8 197 aaPredicted RBP25.25■■□□□ 1.63
LIMD2-207ENST00000579329 TLR8Q9NR97 1041 aaKnown RBP25.25■■□□□ 1.63
LIMD2-207ENST00000579329 GKN1Q9NS71 199 aa25.25■■□□□ 1.63
LIMD2-207ENST00000579329 SCML2Q9UQR0 700 aa25.25■■□□□ 1.63
LIMD2-207ENST00000579329 COL4A3Q01955 1670 aa25.25■■□□□ 1.63
LIMD2-207ENST00000579329 O00370 1275 aa25.24■■□□□ 1.63
LIMD2-207ENST00000579329 SLC9A1P19634 815 aa25.24■■□□□ 1.63
LIMD2-207ENST00000579329 EEF1GP26641 437 aaKnown RBP25.24■■□□□ 1.63
LIMD2-207ENST00000579329 KIF11P52732 1056 aa25.24■■□□□ 1.63
LIMD2-207ENST00000579329 UBXN2BQ14CS0 331 aa25.24■■□□□ 1.63
LIMD2-207ENST00000579329 VWA3BQ502W6 1294 aa25.24■■□□□ 1.63
LIMD2-207ENST00000579329 C11orf57Q6ZUT1 292 aaPredicted RBP25.24■■□□□ 1.63
LIMD2-207ENST00000579329 TTC30AQ86WT1 665 aa25.24■■□□□ 1.63
LIMD2-207ENST00000579329 TTC16Q8NEE8 873 aa25.24■■□□□ 1.63
LIMD2-207ENST00000579329 NELL2Q99435 816 aa25.24■■□□□ 1.63
LIMD2-207ENST00000579329 FAM83CQ9BQN1 747 aa25.24■■□□□ 1.63
LIMD2-207ENST00000579329 OSBPL6Q9BZF3 934 aa25.24■■□□□ 1.63
LIMD2-207ENST00000579329 RNF38Q9H0F5 515 aa25.24■■□□□ 1.63
LIMD2-207ENST00000579329 HELZP42694 1942 aaKnown RBP25.24■■□□□ 1.63
LIMD2-207ENST00000579329 MBL2P11226 248 aaPredicted RBP25.23■■□□□ 1.63
LIMD2-207ENST00000579329 CD72P21854 359 aa25.23■■□□□ 1.63
LIMD2-207ENST00000579329 ZNF132P52740 706 aa25.23■■□□□ 1.63
LIMD2-207ENST00000579329 MFAP3P55082 362 aa25.23■■□□□ 1.63
LIMD2-207ENST00000579329 BST2Q10589 180 aaKnown RBP25.23■■□□□ 1.63
LIMD2-207ENST00000579329 PDGFRLQ15198 375 aa25.23■■□□□ 1.63
LIMD2-207ENST00000579329 STILQ15468 1287 aa25.23■■□□□ 1.63
LIMD2-207ENST00000579329 TCP11X2Q5H9J9 407 aa25.23■■□□□ 1.63
LIMD2-207ENST00000579329 MIIPQ5JXC2 388 aa25.23■■□□□ 1.63
LIMD2-207ENST00000579329 C1orf228Q6PIY5 440 aa25.23■■□□□ 1.63
LIMD2-207ENST00000579329 PIGZQ86VD9 579 aa25.23■■□□□ 1.63
LIMD2-207ENST00000579329 GTSE1Q9NYZ3 720 aa25.23■■□□□ 1.63
LIMD2-207ENST00000579329 APEX2Q9UBZ4 518 aa25.23■■□□□ 1.63
LIMD2-207ENST00000579329 CPQQ9Y646 472 aa25.23■■□□□ 1.63
LIMD2-207ENST00000579329 MYO16Q9Y6X6 1858 aa25.23■■□□□ 1.63
LIMD2-207ENST00000579329 RNF225M0QZC1 329 aaPredicted RBP25.22■■□□□ 1.63
LIMD2-207ENST00000579329 XPO1O14980 1071 aaKnown RBP25.22■■□□□ 1.63
LIMD2-207ENST00000579329 CYP26A1O43174 497 aa25.22■■□□□ 1.63
LIMD2-207ENST00000579329 COCHO43405 550 aa25.22■■□□□ 1.63
LIMD2-207ENST00000579329 GALR2O43603 387 aaPredicted RBP25.22■■□□□ 1.63
LIMD2-207ENST00000579329 PON1P27169 355 aa25.22■■□□□ 1.63
LIMD2-207ENST00000579329 TNK2Q07912 1038 aa25.22■■□□□ 1.63
LIMD2-207ENST00000579329 ITPRIPL2Q3MIP1 535 aa25.22■■□□□ 1.63
LIMD2-207ENST00000579329 CCDC186Q7Z3E2 898 aa25.22■■□□□ 1.63
LIMD2-207ENST00000579329 DDX42Q86XP3 938 aaKnown RBP eCLIP25.22■■□□□ 1.63
LIMD2-207ENST00000579329 CCDC105Q8IYK2 499 aa25.22■■□□□ 1.63
LIMD2-207ENST00000579329 FAM3CQ92520 227 aa25.22■■□□□ 1.63
LIMD2-207ENST00000579329 CNTN6Q9UQ52 1028 aa25.22■■□□□ 1.63
LIMD2-207ENST00000579329 USP3Q9Y6I4 520 aa25.22■■□□□ 1.63
LIMD2-207ENST00000579329 SHISA7A6NL88 538 aa25.21■■□□□ 1.63
LIMD2-207ENST00000579329 FAM170BA6NMN3 283 aa25.21■■□□□ 1.63
LIMD2-207ENST00000579329 LEFTY2O00292 366 aa25.21■■□□□ 1.63
LIMD2-207ENST00000579329 SETSIPP0DME0 302 aa25.21■■□□□ 1.63
LIMD2-207ENST00000579329 KRT5P13647 590 aa25.21■■□□□ 1.63
LIMD2-207ENST00000579329 TARSP26639 723 aaKnown RBP25.21■■□□□ 1.63
LIMD2-207ENST00000579329 IFNAR2P48551 515 aa25.21■■□□□ 1.63
LIMD2-207ENST00000579329 PDE4CQ08493 712 aa25.21■■□□□ 1.63
LIMD2-207ENST00000579329 CAVIN1Q6NZI2 390 aaKnown RBP25.21■■□□□ 1.63
LIMD2-207ENST00000579329 LCLAT1Q6UWP7 414 aa25.21■■□□□ 1.63
LIMD2-207ENST00000579329 RALGPS2Q86X27 583 aaPredicted RBP25.21■■□□□ 1.63
LIMD2-207ENST00000579329 OSCP1Q8WVF1 389 aa25.21■■□□□ 1.63
LIMD2-207ENST00000579329 TFAP2BQ92481 460 aa25.21■■□□□ 1.63
LIMD2-207ENST00000579329 NACA2Q9H009 215 aa25.21■■□□□ 1.63
LIMD2-207ENST00000579329 CCSER2Q9H7U1 834 aa25.21■■□□□ 1.63
LIMD2-207ENST00000579329 HPS4Q9NQG7 708 aa25.21■■□□□ 1.63
LIMD2-207ENST00000579329 DUS2Q9NX74 493 aaKnown RBP25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms