RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 CELF6Q96J87 481 aaKnown RBP12.47□□□□□ -0.41
ERBB2-206ENST00000578373 ARHGEF38Q9NXL2 777 aa12.47□□□□□ -0.41
ERBB2-206ENST00000578373 LRFN2Q9ULH4 789 aa12.47□□□□□ -0.41
ERBB2-206ENST00000578373 FAM237BA0A1B0GVD1 139 aa12.47□□□□□ -0.41
ERBB2-206ENST00000578373 E5RI56 91 aa12.47□□□□□ -0.41
ERBB2-206ENST00000578373 VWA5AO00534 786 aa12.47□□□□□ -0.41
ERBB2-206ENST00000578373 PEX10O60683 326 aa12.47□□□□□ -0.41
ERBB2-206ENST00000578373 ZC3H11AO75152 810 aaKnown RBP eCLIP12.47□□□□□ -0.41
ERBB2-206ENST00000578373 SPAG6O75602 509 aa12.47□□□□□ -0.41
ERBB2-206ENST00000578373 GNAT1P11488 350 aa12.47□□□□□ -0.41
ERBB2-206ENST00000578373 CYP2B6P20813 491 aa12.47□□□□□ -0.41
ERBB2-206ENST00000578373 MCL1Q07820 350 aa12.47□□□□□ -0.41
ERBB2-206ENST00000578373 MYBPC2Q14324 1141 aa12.47□□□□□ -0.41
ERBB2-206ENST00000578373 CRYMQ14894 314 aa12.47□□□□□ -0.41
ERBB2-206ENST00000578373 TTC27Q6P3X3 843 aa12.47□□□□□ -0.41
ERBB2-206ENST00000578373 SUGP1Q8IWZ8 645 aaKnown RBP12.47□□□□□ -0.41
ERBB2-206ENST00000578373 SNRNP27Q8WVK2 155 aaKnown RBP12.47□□□□□ -0.41
ERBB2-206ENST00000578373 MRPL1Q9BYD6 325 aaKnown RBP12.47□□□□□ -0.41
ERBB2-206ENST00000578373 OSBPL7Q9BZF2 842 aa12.47□□□□□ -0.41
ERBB2-206ENST00000578373 FBXO6Q9NRD1 293 aaPredicted RBP12.47□□□□□ -0.41
ERBB2-206ENST00000578373 IRAK4Q9NWZ3 460 aa12.47□□□□□ -0.41
ERBB2-206ENST00000578373 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.47□□□□□ -0.41
ERBB2-206ENST00000578373 AP4E1Q9UPM8 1137 aa12.47□□□□□ -0.41
ERBB2-206ENST00000578373 ZMPSTE24O75844 475 aa12.47□□□□□ -0.41
ERBB2-206ENST00000578373 GHRP10912 638 aa12.47□□□□□ -0.41
ERBB2-206ENST00000578373 HIRAP54198 1017 aaPredicted RBP12.47□□□□□ -0.41
ERBB2-206ENST00000578373 DENND1BQ6P3S1 775 aa12.47□□□□□ -0.41
ERBB2-206ENST00000578373 DEFB107AQ8IZN7 70 aa12.47□□□□□ -0.41
ERBB2-206ENST00000578373 HASPINQ8TF76 798 aa12.47□□□□□ -0.41
ERBB2-206ENST00000578373 ATXN2LQ8WWM7 1075 aaKnown RBP12.47□□□□□ -0.41
ERBB2-206ENST00000578373 ULK4Q96C45 1275 aa12.47□□□□□ -0.41
ERBB2-206ENST00000578373 TMEM176AQ96HP8 235 aa12.47□□□□□ -0.41
ERBB2-206ENST00000578373 TBC1D10AQ9BXI6 508 aa12.47□□□□□ -0.41
ERBB2-206ENST00000578373 A1CFQ9NQ94 594 aaKnown RBP12.47□□□□□ -0.41
ERBB2-206ENST00000578373 SLC24A2Q9UI40 661 aa12.47□□□□□ -0.41
ERBB2-206ENST00000578373 ORC6Q9Y5N6 252 aa12.47□□□□□ -0.41
ERBB2-206ENST00000578373 SPTLC1O15269 473 aa12.46□□□□□ -0.41
ERBB2-206ENST00000578373 MLH1P40692 756 aa12.46□□□□□ -0.41
ERBB2-206ENST00000578373 ZCWPW2Q504Y3 356 aa12.46□□□□□ -0.41
ERBB2-206ENST00000578373 THEM5Q8N1Q8 247 aa12.46□□□□□ -0.41
ERBB2-206ENST00000578373 ATPAF2Q8N5M1 289 aa12.46□□□□□ -0.41
ERBB2-206ENST00000578373 NMD3Q96D46 503 aaKnown RBP12.46□□□□□ -0.41
ERBB2-206ENST00000578373 SH3GL3Q99963 347 aa12.46□□□□□ -0.41
ERBB2-206ENST00000578373 BEGAINQ9BUH8 593 aa12.46□□□□□ -0.41
ERBB2-206ENST00000578373 PCYOX1Q9UHG3 505 aa12.46□□□□□ -0.41
ERBB2-206ENST00000578373 SHOC2Q9UQ13 582 aa12.46□□□□□ -0.41
ERBB2-206ENST00000578373 ASB14A6NK59 587 aa12.46□□□□□ -0.41
ERBB2-206ENST00000578373 TULP2O00295 520 aa12.46□□□□□ -0.41
ERBB2-206ENST00000578373 N4BP2L1Q5TBK1 243 aaPredicted RBP12.46□□□□□ -0.41
ERBB2-206ENST00000578373 STRA8Q7Z7C7 330 aa12.46□□□□□ -0.41
ERBB2-206ENST00000578373 ASAP3Q8TDY4 903 aa12.46□□□□□ -0.41
ERBB2-206ENST00000578373 ADNPQ9H2P0 1102 aa12.46□□□□□ -0.41
ERBB2-206ENST00000578373 IARS2Q9NSE4 1012 aaKnown RBP12.46□□□□□ -0.41
ERBB2-206ENST00000578373 C2orf71A6NGG8 1288 aa12.46□□□□□ -0.42
ERBB2-206ENST00000578373 E5RJQ4 531 aa12.46□□□□□ -0.42
ERBB2-206ENST00000578373 IL18RAPO95256 599 aa12.46□□□□□ -0.42
ERBB2-206ENST00000578373 ZNF286BP0CG31 522 aa12.46□□□□□ -0.42
ERBB2-206ENST00000578373 RALBP11234 206 aa12.46□□□□□ -0.42
ERBB2-206ENST00000578373 AKAP5P24588 427 aa12.46□□□□□ -0.42
ERBB2-206ENST00000578373 TNFRSF8P28908 595 aa12.46□□□□□ -0.42
ERBB2-206ENST00000578373 PTK6Q13882 451 aa12.46□□□□□ -0.42
ERBB2-206ENST00000578373 ZNF235Q14590 738 aa12.46□□□□□ -0.42
ERBB2-206ENST00000578373 TDRD10Q5VZ19 366 aaKnown RBP12.46□□□□□ -0.42
ERBB2-206ENST00000578373 STYK1Q6J9G0 422 aa12.46□□□□□ -0.42
ERBB2-206ENST00000578373 TTC39CQ8N584 583 aa12.46□□□□□ -0.42
ERBB2-206ENST00000578373 RDM1Q8NG50 284 aa12.46□□□□□ -0.42
ERBB2-206ENST00000578373 CYGBQ8WWM9 190 aa12.46□□□□□ -0.42
ERBB2-206ENST00000578373 EDEM1Q92611 657 aa12.46□□□□□ -0.42
ERBB2-206ENST00000578373 MKL1Q969V6 931 aa12.46□□□□□ -0.42
ERBB2-206ENST00000578373 DDX50Q9BQ39 737 aaKnown RBP12.46□□□□□ -0.42
ERBB2-206ENST00000578373 NDFIP2Q9NV92 336 aa12.46□□□□□ -0.42
ERBB2-206ENST00000578373 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.46□□□□□ -0.42
ERBB2-206ENST00000578373 VAV3Q9UKW4 847 aa12.46□□□□□ -0.42
ERBB2-206ENST00000578373 ADGRA2Q96PE1 1338 aa12.46□□□□□ -0.42
ERBB2-206ENST00000578373 CYP3A7-CYP3A51PA0A087WV96 503 aa12.45□□□□□ -0.42
ERBB2-206ENST00000578373 ANGPT2O15123 496 aa12.45□□□□□ -0.42
ERBB2-206ENST00000578373 HMGCRP04035 888 aa12.45□□□□□ -0.42
ERBB2-206ENST00000578373 HNRNPCP07910 306 aaKnown RBP eCLIP12.45□□□□□ -0.422e-7■□□□□ 9.2
ERBB2-206ENST00000578373 CYP3A7P24462 503 aa12.45□□□□□ -0.42
ERBB2-206ENST00000578373 C16orf87Q6PH81 154 aa12.45□□□□□ -0.42
ERBB2-206ENST00000578373 DACT3Q96B18 629 aaPredicted RBP12.45□□□□□ -0.42
ERBB2-206ENST00000578373 OSMRQ99650 979 aa12.45□□□□□ -0.42
ERBB2-206ENST00000578373 URB1O60287 2271 aaKnown RBP12.45□□□□□ -0.42
ERBB2-206ENST00000578373 WDR27A2RRH5 827 aa12.45□□□□□ -0.42
ERBB2-206ENST00000578373 SDR42E2A6NKP2 422 aa12.45□□□□□ -0.42
ERBB2-206ENST00000578373 SUPT7LO94864 414 aa12.45□□□□□ -0.42
ERBB2-206ENST00000578373 CPB1P15086 417 aa12.45□□□□□ -0.42
ERBB2-206ENST00000578373 MUTP22033 750 aa12.45□□□□□ -0.42
ERBB2-206ENST00000578373 CYP2F1P24903 491 aa12.45□□□□□ -0.42
ERBB2-206ENST00000578373 MSL3Q8N5Y2 521 aaKnown RBP12.45□□□□□ -0.42
ERBB2-206ENST00000578373 SPDYE1Q8NFV5 336 aaPredicted RBP12.45□□□□□ -0.42
ERBB2-206ENST00000578373 PPCSQ9HAB8 311 aa12.45□□□□□ -0.42
ERBB2-206ENST00000578373 OLA1Q9NTK5 396 aaKnown RBP12.45□□□□□ -0.42
ERBB2-206ENST00000578373 CDY2AQ9Y6F7 541 aa12.45□□□□□ -0.42
ERBB2-206ENST00000578373 CDY1Q9Y6F8 540 aa12.45□□□□□ -0.42
ERBB2-206ENST00000578373 DCXO43602 365 aa12.45□□□□□ -0.42
ERBB2-206ENST00000578373 CYP3A4P08684 503 aa12.45□□□□□ -0.42
ERBB2-206ENST00000578373 VDRP11473 427 aa12.45□□□□□ -0.42
ERBB2-206ENST00000578373 INSRRP14616 1297 aa12.45□□□□□ -0.42
ERBB2-206ENST00000578373 CALB2P22676 271 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms