RNA–Protein interactions for RNA: ENST00000577875.5

KPNB1-204, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-204ENST00000577875 C22orf31O95567 290 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 EFEMP2O95967 443 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 VTNP04004 478 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 C8AP07357 584 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 SPATA31D3P0C874 917 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 CALM1P0DP23 149 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 CALM2P0DP24 149 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 CALM3P0DP25 149 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 MYBP10242 640 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 CPEP16870 476 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 PSMC3P17980 439 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 CCNE1P24864 410 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 TMOD1P28289 359 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 GDI1P31150 447 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 CSRP3P50461 194 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 RIPPLY3P57055 190 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 CCT2P78371 535 aaKnown RBP5.08□□□□□ -1.6
KPNB1-204ENST00000577875 SEMA3BQ13214 749 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 MTMR1Q13613 665 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 ZNF460Q14592 562 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 UVSSAQ2YD98 709 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 USP41Q3LFD5 358 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 TRIM61Q5EBN2 209 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 PMS2CLQ68D20 193 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 TWF2Q6IBS0 349 aaKnown RBP5.08□□□□□ -1.6
KPNB1-204ENST00000577875 TANGO2Q6ICL3 276 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 SPATA31D4Q6ZUB0 917 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 TMTC3Q6ZXV5 915 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 FGD2Q7Z6J4 655 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 MICU3Q86XE3 530 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 PALB2Q86YC2 1186 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 AGGF1Q8N302 714 aaeCLIP5.08□□□□□ -1.6
KPNB1-204ENST00000577875 MFSD2AQ8NA29 543 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 DNAJB8Q8NHS0 232 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 CTCFLQ8NI51 663 aaPredicted RBP5.08□□□□□ -1.6
KPNB1-204ENST00000577875 RIN3Q8TB24 985 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 CUL5Q93034 780 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 ZNF274Q96GC6 653 aaPredicted RBP5.08□□□□□ -1.6
KPNB1-204ENST00000577875 MRGPRX3Q96LB0 322 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 SCLT1Q96NL6 688 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 PPP1R16BQ96T49 567 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 LZTS2Q9BRK4 669 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 SPZ1Q9BXG8 430 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 C22orf23Q9BZE7 217 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 PRORYQ9H606 182 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 TRIM39Q9HCM9 518 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 CHST7Q9NS84 486 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 MARCH5Q9NX47 278 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 PCOLCE2Q9UKZ9 415 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 TPCN1Q9ULQ1 816 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 CEP131Q9UPN4 1083 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 SLC8A2Q9UPR5 921 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 EMC9Q9Y3B6 208 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 MGAQ8IWI9 3026 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 SPTBN1Q01082 2364 aaKnown RBP5.08□□□□□ -1.6
KPNB1-204ENST00000577875 FLNCQ14315 2725 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 ATG2BQ96BY7 2078 aa5.08□□□□□ -1.6
KPNB1-204ENST00000577875 TNRC6BQ9UPQ9 1833 aaKnown RBP5.07□□□□□ -1.6
KPNB1-204ENST00000577875 MUC22E2RYF6 1773 aaPredicted RBP5.07□□□□□ -1.6
KPNB1-204ENST00000577875 E9PAM4 449 aa5.07□□□□□ -1.6
KPNB1-204ENST00000577875 FAM229AH3BQW9 127 aa5.07□□□□□ -1.6
KPNB1-204ENST00000577875 ZNF263O14978 683 aa5.07□□□□□ -1.6
KPNB1-204ENST00000577875 MAGEB2O15479 319 aa5.07□□□□□ -1.6
KPNB1-204ENST00000577875 DLX3O60479 287 aa5.07□□□□□ -1.6
KPNB1-204ENST00000577875 B4GALT3O60512 393 aa5.07□□□□□ -1.6
KPNB1-204ENST00000577875 ATP9AO75110 1047 aa5.07□□□□□ -1.6
KPNB1-204ENST00000577875 DARSP14868 501 aaKnown RBP5.07□□□□□ -1.6
KPNB1-204ENST00000577875 SFPQP23246 707 aaKnown RBP eCLIP5.07□□□□□ -1.6
KPNB1-204ENST00000577875 FCARP24071 287 aa5.07□□□□□ -1.6
KPNB1-204ENST00000577875 KIF5BP33176 963 aa5.07□□□□□ -1.6
KPNB1-204ENST00000577875 GNAQP50148 359 aa5.07□□□□□ -1.6
KPNB1-204ENST00000577875 RCAN1P53805 252 aa5.07□□□□□ -1.6
KPNB1-204ENST00000577875 ATXN3P54252 364 aaPredicted RBP5.07□□□□□ -1.6
KPNB1-204ENST00000577875 NLRP11P59045 1033 aaKnown RBP5.07□□□□□ -1.6
KPNB1-204ENST00000577875 ACTR2P61160 394 aa5.07□□□□□ -1.6
KPNB1-204ENST00000577875 GABREP78334 506 aa5.07□□□□□ -1.6
KPNB1-204ENST00000577875 CDC42EP1Q00587 391 aa5.07□□□□□ -1.6
KPNB1-204ENST00000577875 SF1Q15637 639 aaKnown RBP5.07□□□□□ -1.6
KPNB1-204ENST00000577875 MAPK6Q16659 721 aa5.07□□□□□ -1.6
KPNB1-204ENST00000577875 ME3Q16798 604 aa5.07□□□□□ -1.6
KPNB1-204ENST00000577875 ANKRD39Q53RE8 183 aa5.07□□□□□ -1.6
KPNB1-204ENST00000577875 GTF2IRD2BQ6EKJ0 949 aa5.07□□□□□ -1.6
KPNB1-204ENST00000577875 LETMD1Q6P1Q0 360 aa5.07□□□□□ -1.6
KPNB1-204ENST00000577875 PKN3Q6P5Z2 889 aa5.07□□□□□ -1.6
KPNB1-204ENST00000577875 SYNE3Q6ZMZ3 975 aa5.07□□□□□ -1.6
KPNB1-204ENST00000577875 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.07□□□□□ -1.6
KPNB1-204ENST00000577875 CDH24Q86UP0 819 aa5.07□□□□□ -1.6
KPNB1-204ENST00000577875 GTF2IRD2Q86UP8 949 aa5.07□□□□□ -1.6
KPNB1-204ENST00000577875 RALGPS2Q86X27 583 aaPredicted RBP5.07□□□□□ -1.6
KPNB1-204ENST00000577875 WDR75Q8IWA0 830 aaKnown RBP5.07□□□□□ -1.6
KPNB1-204ENST00000577875 AHI1Q8N157 1196 aa5.07□□□□□ -1.6
KPNB1-204ENST00000577875 METTL13Q8N6R0 699 aa5.07□□□□□ -1.6
KPNB1-204ENST00000577875 C2CD4AQ8NCU7 369 aaPredicted RBP5.07□□□□□ -1.6
KPNB1-204ENST00000577875 SMARCC2Q8TAQ2 1214 aa5.07□□□□□ -1.6
KPNB1-204ENST00000577875 PIP4K2CQ8TBX8 421 aa5.07□□□□□ -1.6
KPNB1-204ENST00000577875 SPATA18Q8TC71 538 aa5.07□□□□□ -1.6
KPNB1-204ENST00000577875 ING5Q8WYH8 240 aa5.07□□□□□ -1.6
KPNB1-204ENST00000577875 KCTD13Q8WZ19 329 aa5.07□□□□□ -1.6
KPNB1-204ENST00000577875 E2F7Q96AV8 911 aa5.07□□□□□ -1.6
KPNB1-204ENST00000577875 WBP1Q96G27 269 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms