RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 CENPCQ03188 943 aa11.76□□□□□ -0.53
CDK5RAP3-204ENST00000577664 BST2Q10589 180 aaKnown RBP11.76□□□□□ -0.53
CDK5RAP3-204ENST00000577664 ORC1Q13415 861 aa11.76□□□□□ -0.53
CDK5RAP3-204ENST00000577664 CLEC16AQ2KHT3 1053 aa11.76□□□□□ -0.53
CDK5RAP3-204ENST00000577664 SLC39A12Q504Y0 691 aa11.76□□□□□ -0.53
CDK5RAP3-204ENST00000577664 RAB41Q5JT25 222 aa11.76□□□□□ -0.53
CDK5RAP3-204ENST00000577664 FAM35AQ86V20 835 aa11.76□□□□□ -0.53
CDK5RAP3-204ENST00000577664 PHF13Q86YI8 300 aaPredicted RBP11.76□□□□□ -0.53
CDK5RAP3-204ENST00000577664 TMEM35BQ8NCS4 154 aa11.76□□□□□ -0.53
CDK5RAP3-204ENST00000577664 ZMIZ2Q8NF64 920 aa11.76□□□□□ -0.53
CDK5RAP3-204ENST00000577664 VN1R2Q8NFZ6 395 aa11.76□□□□□ -0.53
CDK5RAP3-204ENST00000577664 SLC22A17Q8WUG5 538 aa11.76□□□□□ -0.53
CDK5RAP3-204ENST00000577664 SLC20A1Q8WUM9 679 aa11.76□□□□□ -0.53
CDK5RAP3-204ENST00000577664 MYLPFQ96A32 169 aa11.76□□□□□ -0.53
CDK5RAP3-204ENST00000577664 SMARCD1Q96GM5 515 aa11.76□□□□□ -0.53
CDK5RAP3-204ENST00000577664 SPATA17Q96L03 361 aa11.76□□□□□ -0.53
CDK5RAP3-204ENST00000577664 EIF3CQ99613 913 aaKnown RBP11.76□□□□□ -0.53
CDK5RAP3-204ENST00000577664 CDCA3Q99618 268 aaPredicted RBP11.76□□□□□ -0.53
CDK5RAP3-204ENST00000577664 LPIN3Q9BQK8 851 aa11.76□□□□□ -0.53
CDK5RAP3-204ENST00000577664 SLC4A5Q9BY07 1137 aa11.76□□□□□ -0.53
CDK5RAP3-204ENST00000577664 COMMD8Q9NX08 183 aa11.76□□□□□ -0.53
CDK5RAP3-204ENST00000577664 HESX1Q9UBX0 185 aa11.76□□□□□ -0.53
CDK5RAP3-204ENST00000577664 NAGPAQ9UK23 515 aa11.76□□□□□ -0.53
CDK5RAP3-204ENST00000577664 EPN1Q9Y6I3 576 aaPredicted RBP11.76□□□□□ -0.53
CDK5RAP3-204ENST00000577664 PTPRDP23468 1912 aa11.76□□□□□ -0.53
CDK5RAP3-204ENST00000577664 A0A087X0T9 212 aa11.75□□□□□ -0.53
CDK5RAP3-204ENST00000577664 FAM92AA1XBS5 289 aa11.75□□□□□ -0.53
CDK5RAP3-204ENST00000577664 HHLA1C9JL84 531 aa11.75□□□□□ -0.53
CDK5RAP3-204ENST00000577664 C2CD2LO14523 706 aa11.75□□□□□ -0.53
CDK5RAP3-204ENST00000577664 TNFRSF10BO14763 440 aa11.75□□□□□ -0.53
CDK5RAP3-204ENST00000577664 TGM5O43548 720 aa11.75□□□□□ -0.53
CDK5RAP3-204ENST00000577664 RTN2O75298 545 aa11.75□□□□□ -0.53
CDK5RAP3-204ENST00000577664 NDUFA10O95299 355 aa11.75□□□□□ -0.53
CDK5RAP3-204ENST00000577664 CALCAP01258 141 aa11.75□□□□□ -0.53
CDK5RAP3-204ENST00000577664 OR4Q2P0C623 313 aa11.75□□□□□ -0.53
CDK5RAP3-204ENST00000577664 FAM228BP0C875 321 aa11.75□□□□□ -0.53
CDK5RAP3-204ENST00000577664 CCDC130P13994 396 aa11.75□□□□□ -0.53
CDK5RAP3-204ENST00000577664 RPL17P18621 184 aaKnown RBP11.75□□□□□ -0.53
CDK5RAP3-204ENST00000577664 MMP8P22894 467 aa11.75□□□□□ -0.53
CDK5RAP3-204ENST00000577664 LMNB2Q03252 620 aa11.75□□□□□ -0.53
CDK5RAP3-204ENST00000577664 PTP4A2Q12974 167 aa11.75□□□□□ -0.53
CDK5RAP3-204ENST00000577664 ACAD10Q6JQN1 1059 aa11.75□□□□□ -0.53
CDK5RAP3-204ENST00000577664 ZNF662Q6ZS27 426 aa11.75□□□□□ -0.53
CDK5RAP3-204ENST00000577664 CLEC20AQ6ZU45 233 aa11.75□□□□□ -0.53
CDK5RAP3-204ENST00000577664 SPATA2LQ8IUW3 424 aaPredicted RBP11.75□□□□□ -0.53
CDK5RAP3-204ENST00000577664 GLYCTKQ8IVS8 523 aa11.75□□□□□ -0.53
CDK5RAP3-204ENST00000577664 FLCNQ8NFG4 579 aa11.75□□□□□ -0.53
CDK5RAP3-204ENST00000577664 AUTS2Q8WXX7 1259 aa11.75□□□□□ -0.53
CDK5RAP3-204ENST00000577664 SMOQ99835 787 aa11.75□□□□□ -0.53
CDK5RAP3-204ENST00000577664 PLEKHA4Q9H4M7 779 aa11.75□□□□□ -0.53
CDK5RAP3-204ENST00000577664 ENTPD7Q9NQZ7 604 aa11.75□□□□□ -0.53
CDK5RAP3-204ENST00000577664 FAM49BQ9NUQ9 324 aa11.75□□□□□ -0.53
CDK5RAP3-204ENST00000577664 TMEM30AQ9NV96 361 aa11.75□□□□□ -0.53
CDK5RAP3-204ENST00000577664 DPP7Q9UHL4 492 aa11.75□□□□□ -0.53
CDK5RAP3-204ENST00000577664 CDV3Q9UKY7 258 aaKnown RBP11.75□□□□□ -0.53
CDK5RAP3-204ENST00000577664 INTUQ9ULD6 942 aa11.75□□□□□ -0.53
CDK5RAP3-204ENST00000577664 CEP83Q9Y592 693 aa11.75□□□□□ -0.53
CDK5RAP3-204ENST00000577664 USP3Q9Y6I4 520 aa11.75□□□□□ -0.53
CDK5RAP3-204ENST00000577664 GCN1Q92616 2671 aaKnown RBP11.75□□□□□ -0.53
CDK5RAP3-204ENST00000577664 FRYQ5TBA9 3013 aa11.74□□□□□ -0.53
CDK5RAP3-204ENST00000577664 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.74□□□□□ -0.53
CDK5RAP3-204ENST00000577664 C2CD4DB7Z1M9 353 aa11.74□□□□□ -0.53
CDK5RAP3-204ENST00000577664 CLDN5O00501 218 aa11.74□□□□□ -0.53
CDK5RAP3-204ENST00000577664 ZNF263O14978 683 aa11.74□□□□□ -0.53
CDK5RAP3-204ENST00000577664 TRIM66O15016 1216 aa11.74□□□□□ -0.53
CDK5RAP3-204ENST00000577664 NRDCO43847 1150 aa11.74□□□□□ -0.53
CDK5RAP3-204ENST00000577664 CLASP2O75122 1294 aaKnown RBP11.74□□□□□ -0.53
CDK5RAP3-204ENST00000577664 GABBR2O75899 941 aa11.74□□□□□ -0.53
CDK5RAP3-204ENST00000577664 BEST1O76090 585 aa11.74□□□□□ -0.53
CDK5RAP3-204ENST00000577664 POU2F2P09086 479 aa11.74□□□□□ -0.53
CDK5RAP3-204ENST00000577664 FAM200BP0CF97 657 aa11.74□□□□□ -0.53
CDK5RAP3-204ENST00000577664 CPB1P15086 417 aa11.74□□□□□ -0.53
CDK5RAP3-204ENST00000577664 BDNFP23560 247 aa11.74□□□□□ -0.53
CDK5RAP3-204ENST00000577664 CYP2F1P24903 491 aa11.74□□□□□ -0.53
CDK5RAP3-204ENST00000577664 HOXA9P31269 272 aa11.74□□□□□ -0.53
CDK5RAP3-204ENST00000577664 CYLC1P35663 651 aaPredicted RBP11.74□□□□□ -0.53
CDK5RAP3-204ENST00000577664 ACADSBP45954 432 aa11.74□□□□□ -0.53
CDK5RAP3-204ENST00000577664 KIF11P52732 1056 aa11.74□□□□□ -0.53
CDK5RAP3-204ENST00000577664 SLC8A3P57103 927 aa11.74□□□□□ -0.53
CDK5RAP3-204ENST00000577664 SNX16P57768 344 aa11.74□□□□□ -0.53
CDK5RAP3-204ENST00000577664 CYP27A1Q02318 531 aa11.74□□□□□ -0.53
CDK5RAP3-204ENST00000577664 PDE4CQ08493 712 aa11.74□□□□□ -0.53
CDK5RAP3-204ENST00000577664 ADCY1Q08828 1119 aa11.74□□□□□ -0.53
CDK5RAP3-204ENST00000577664 DUSP4Q13115 394 aa11.74□□□□□ -0.53
CDK5RAP3-204ENST00000577664 TCEAL1Q15170 157 aa11.74□□□□□ -0.53
CDK5RAP3-204ENST00000577664 DUSP6Q16828 381 aa11.74□□□□□ -0.53
CDK5RAP3-204ENST00000577664 CCDC142Q17RM4 750 aa11.74□□□□□ -0.53
CDK5RAP3-204ENST00000577664 GOLGA7BQ2TAP0 167 aa11.74□□□□□ -0.53
CDK5RAP3-204ENST00000577664 TDRD12Q587J7 1177 aaKnown RBP11.74□□□□□ -0.53
CDK5RAP3-204ENST00000577664 PM20D1Q6GTS8 502 aa11.74□□□□□ -0.53
CDK5RAP3-204ENST00000577664 PMF1Q6P1K2 205 aa11.74□□□□□ -0.53
CDK5RAP3-204ENST00000577664 DENND1BQ6P3S1 775 aa11.74□□□□□ -0.53
CDK5RAP3-204ENST00000577664 ALKBH5Q6P6C2 394 aaKnown RBP11.74□□□□□ -0.53
CDK5RAP3-204ENST00000577664 SYCE2Q6PIF2 218 aa11.74□□□□□ -0.53
CDK5RAP3-204ENST00000577664 RAD9BQ6WBX8 426 aa11.74□□□□□ -0.53
CDK5RAP3-204ENST00000577664 RBM23Q86U06 439 aaKnown RBP11.74□□□□□ -0.53
CDK5RAP3-204ENST00000577664 PALB2Q86YC2 1186 aa11.74□□□□□ -0.53
CDK5RAP3-204ENST00000577664 ATAD1Q8NBU5 361 aa11.74□□□□□ -0.53
CDK5RAP3-204ENST00000577664 RHOBTB2Q9BYZ6 727 aa11.74□□□□□ -0.53
CDK5RAP3-204ENST00000577664 CRISPLD1Q9H336 500 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms