RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 SLITRK1Q96PX8 696 aa10.82□□□□□ -0.68
GTF3C1-213ENST00000571886 CRACR2AQ9BSW2 395 aa10.82□□□□□ -0.68
GTF3C1-213ENST00000571886 INTS2Q9H0H0 1204 aaKnown RBP10.82□□□□□ -0.68
GTF3C1-213ENST00000571886 SAMSN1Q9NSI8 373 aaKnown RBP10.82□□□□□ -0.68
GTF3C1-213ENST00000571886 SMPD4Q9NXE4 827 aa10.82□□□□□ -0.68
GTF3C1-213ENST00000571886 ZMYM5Q9UJ78 669 aa10.82□□□□□ -0.68
GTF3C1-213ENST00000571886 ARHGAP26Q9UNA1 814 aa10.82□□□□□ -0.68
GTF3C1-213ENST00000571886 CPQQ9Y646 472 aa10.82□□□□□ -0.68
GTF3C1-213ENST00000571886 WNT6Q9Y6F9 365 aa10.82□□□□□ -0.68
GTF3C1-213ENST00000571886 A0A1W2PQH9 124 aa10.81□□□□□ -0.68
GTF3C1-213ENST00000571886 SPECC1L-ADORA2AF8WAN1 911 aa10.81□□□□□ -0.68
GTF3C1-213ENST00000571886 CYP26A1O43174 497 aa10.81□□□□□ -0.68
GTF3C1-213ENST00000571886 GABBR2O75899 941 aa10.81□□□□□ -0.68
GTF3C1-213ENST00000571886 MBL2P11226 248 aaPredicted RBP10.81□□□□□ -0.68
GTF3C1-213ENST00000571886 CHRNB1P11230 501 aa10.81□□□□□ -0.68
GTF3C1-213ENST00000571886 TCF3P15923 654 aa10.81□□□□□ -0.68
GTF3C1-213ENST00000571886 TBXAS1P24557 533 aaPredicted RBP10.81□□□□□ -0.68
GTF3C1-213ENST00000571886 HOXC13P31276 330 aa10.81□□□□□ -0.68
GTF3C1-213ENST00000571886 CTHP32929 405 aa10.81□□□□□ -0.68
GTF3C1-213ENST00000571886 PPP3CCP48454 512 aa10.81□□□□□ -0.68
GTF3C1-213ENST00000571886 KIF11P52732 1056 aa10.81□□□□□ -0.68
GTF3C1-213ENST00000571886 GAS6Q14393 721 aa10.81□□□□□ -0.68
GTF3C1-213ENST00000571886 PON2Q15165 354 aa10.81□□□□□ -0.68
GTF3C1-213ENST00000571886 ANGPT1Q15389 498 aa10.81□□□□□ -0.68
GTF3C1-213ENST00000571886 EML3Q32P44 896 aa10.81□□□□□ -0.68
GTF3C1-213ENST00000571886 TMEM270Q6UE05 265 aa10.81□□□□□ -0.68
GTF3C1-213ENST00000571886 SCD5Q86SK9 330 aa10.81□□□□□ -0.68
GTF3C1-213ENST00000571886 PIGZQ86VD9 579 aa10.81□□□□□ -0.68
GTF3C1-213ENST00000571886 PIAS4Q8N2W9 510 aaPredicted RBP10.81□□□□□ -0.68
GTF3C1-213ENST00000571886 OVCA2Q8WZ82 227 aa10.81□□□□□ -0.68
GTF3C1-213ENST00000571886 CLDN23Q96B33 292 aa10.81□□□□□ -0.68
GTF3C1-213ENST00000571886 FAM122AQ96E09 287 aa10.81□□□□□ -0.68
GTF3C1-213ENST00000571886 ZFRQ96KR1 1074 aaKnown RBP10.81□□□□□ -0.68
GTF3C1-213ENST00000571886 PRRX2Q99811 253 aa10.81□□□□□ -0.68
GTF3C1-213ENST00000571886 OSBPL6Q9BZF3 934 aa10.81□□□□□ -0.68
GTF3C1-213ENST00000571886 KIF9Q9HAQ2 790 aa10.81□□□□□ -0.68
GTF3C1-213ENST00000571886 LMAN1LQ9HAT1 526 aa10.81□□□□□ -0.68
GTF3C1-213ENST00000571886 FBRSL1Q9HCM7 1045 aaKnown RBP10.81□□□□□ -0.68
GTF3C1-213ENST00000571886 RBM12Q9NTZ6 932 aaKnown RBP10.81□□□□□ -0.68
GTF3C1-213ENST00000571886 THG1LQ9NWX6 298 aaKnown RBP10.81□□□□□ -0.68
GTF3C1-213ENST00000571886 COMMD8Q9NX08 183 aa10.81□□□□□ -0.68
GTF3C1-213ENST00000571886 DUS2Q9NX74 493 aaKnown RBP10.81□□□□□ -0.68
GTF3C1-213ENST00000571886 EHD2Q9NZN4 543 aa10.81□□□□□ -0.68
GTF3C1-213ENST00000571886 AJAP1Q9UKB5 411 aaPredicted RBP10.81□□□□□ -0.68
GTF3C1-213ENST00000571886 NUDT5Q9UKK9 219 aa10.81□□□□□ -0.68
GTF3C1-213ENST00000571886 TSPAN16Q9UKR8 245 aa10.81□□□□□ -0.68
GTF3C1-213ENST00000571886 SCML2Q9UQR0 700 aa10.81□□□□□ -0.68
GTF3C1-213ENST00000571886 PCDHB4Q9Y5E5 795 aa10.81□□□□□ -0.68
GTF3C1-213ENST00000571886 USP3Q9Y6I4 520 aa10.81□□□□□ -0.68
GTF3C1-213ENST00000571886 ANTXRLA6NF34 631 aa10.8□□□□□ -0.68
GTF3C1-213ENST00000571886 O00370 1275 aa10.8□□□□□ -0.68
GTF3C1-213ENST00000571886 MAN2B1O00754 1011 aa10.8□□□□□ -0.68
GTF3C1-213ENST00000571886 MDM4O15151 490 aa10.8□□□□□ -0.68
GTF3C1-213ENST00000571886 VDRP11473 427 aa10.8□□□□□ -0.68
GTF3C1-213ENST00000571886 CD19P15391 556 aa10.8□□□□□ -0.68
GTF3C1-213ENST00000571886 PFKLP17858 780 aa10.8□□□□□ -0.68
GTF3C1-213ENST00000571886 BRD2P25440 801 aaKnown RBP10.8□□□□□ -0.68
GTF3C1-213ENST00000571886 ERCC5P28715 1186 aaPredicted RBP10.8□□□□□ -0.68
GTF3C1-213ENST00000571886 MTIF2P46199 727 aaKnown RBP10.8□□□□□ -0.68
GTF3C1-213ENST00000571886 PTPN5P54829 565 aa10.8□□□□□ -0.68
GTF3C1-213ENST00000571886 MLLT6P55198 1093 aaPredicted RBP10.8□□□□□ -0.68
GTF3C1-213ENST00000571886 PLCB2Q00722 1185 aa10.8□□□□□ -0.68
GTF3C1-213ENST00000571886 PDE4CQ08493 712 aa10.8□□□□□ -0.68
GTF3C1-213ENST00000571886 GOLGA7BQ2TAP0 167 aa10.8□□□□□ -0.68
GTF3C1-213ENST00000571886 ITPRIPL2Q3MIP1 535 aa10.8□□□□□ -0.68
GTF3C1-213ENST00000571886 PKDCCQ504Y2 493 aa10.8□□□□□ -0.68
GTF3C1-213ENST00000571886 MIIPQ5JXC2 388 aa10.8□□□□□ -0.68
GTF3C1-213ENST00000571886 HECTD3Q5T447 861 aa10.8□□□□□ -0.68
GTF3C1-213ENST00000571886 DPY19L2P1Q6NXN4 242 aa10.8□□□□□ -0.68
GTF3C1-213ENST00000571886 C11orf57Q6ZUT1 292 aaPredicted RBP10.8□□□□□ -0.68
GTF3C1-213ENST00000571886 TTC39CQ8N584 583 aa10.8□□□□□ -0.68
GTF3C1-213ENST00000571886 ANKRD52Q8NB46 1076 aa10.8□□□□□ -0.68
GTF3C1-213ENST00000571886 PDZD8Q8NEN9 1154 aa10.8□□□□□ -0.68
GTF3C1-213ENST00000571886 OSCP1Q8WVF1 389 aa10.8□□□□□ -0.68
GTF3C1-213ENST00000571886 NELL2Q99435 816 aa10.8□□□□□ -0.68
GTF3C1-213ENST00000571886 FBXO44Q9H4M3 255 aa10.8□□□□□ -0.68
GTF3C1-213ENST00000571886 THAP9Q9H5L6 903 aa10.8□□□□□ -0.68
GTF3C1-213ENST00000571886 C8orf33Q9H7E9 229 aaPredicted RBP10.8□□□□□ -0.68
GTF3C1-213ENST00000571886 ECT2Q9H8V3 914 aa10.8□□□□□ -0.68
GTF3C1-213ENST00000571886 SIX2Q9NPC8 291 aa10.8□□□□□ -0.68
GTF3C1-213ENST00000571886 UBE2TQ9NPD8 197 aaPredicted RBP10.8□□□□□ -0.68
GTF3C1-213ENST00000571886 ACP6Q9NPH0 428 aa10.8□□□□□ -0.68
GTF3C1-213ENST00000571886 TMEM63CQ9P1W3 806 aa10.8□□□□□ -0.68
GTF3C1-213ENST00000571886 BECN2A8MW95 431 aa10.79□□□□□ -0.68
GTF3C1-213ENST00000571886 PON1P27169 355 aa10.79□□□□□ -0.68
GTF3C1-213ENST00000571886 ZNF132P52740 706 aa10.79□□□□□ -0.68
GTF3C1-213ENST00000571886 YWHAEP62258 255 aaKnown RBP10.79□□□□□ -0.68
GTF3C1-213ENST00000571886 GCNT1Q02742 428 aa10.79□□□□□ -0.68
GTF3C1-213ENST00000571886 KCNMA1Q12791 1236 aa10.79□□□□□ -0.68
GTF3C1-213ENST00000571886 CETN1Q12798 172 aa10.79□□□□□ -0.68
GTF3C1-213ENST00000571886 MTAPQ13126 283 aa10.79□□□□□ -0.68
GTF3C1-213ENST00000571886 TPD52L1Q16890 204 aaPredicted RBP10.79□□□□□ -0.68
GTF3C1-213ENST00000571886 GAB4Q2WGN9 574 aa10.79□□□□□ -0.68
GTF3C1-213ENST00000571886 SGO2Q562F6 1265 aa10.79□□□□□ -0.68
GTF3C1-213ENST00000571886 RAB41Q5JT25 222 aa10.79□□□□□ -0.68
GTF3C1-213ENST00000571886 CC2D1AQ6P1N0 951 aaPredicted RBP10.79□□□□□ -0.68
GTF3C1-213ENST00000571886 TRIM65Q6PJ69 517 aa10.79□□□□□ -0.68
GTF3C1-213ENST00000571886 BHLHA9Q7RTU4 235 aa10.79□□□□□ -0.68
GTF3C1-213ENST00000571886 RALGPS2Q86X27 583 aaPredicted RBP10.79□□□□□ -0.68
GTF3C1-213ENST00000571886 C1orf210Q8IVY1 113 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms