RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 CHD7Q9P2D1 2997 aa16.2■□□□□ 0.18
HERPUD1-219ENST00000570273 TMEM110-MUSTN1A8MSY1 372 aa16.19■□□□□ 0.18
HERPUD1-219ENST00000570273 TNFRSF10BO14763 440 aa16.19■□□□□ 0.18
HERPUD1-219ENST00000570273 SART1O43290 800 aaKnown RBP16.19■□□□□ 0.18
HERPUD1-219ENST00000570273 TGM5O43548 720 aa16.19■□□□□ 0.18
HERPUD1-219ENST00000570273 ZNF500O60304 480 aaPredicted RBP16.19■□□□□ 0.18
HERPUD1-219ENST00000570273 ZBED1O96006 694 aa16.19■□□□□ 0.18
HERPUD1-219ENST00000570273 USP17L7P0C7H9 530 aa16.19■□□□□ 0.18
HERPUD1-219ENST00000570273 KRT3P12035 628 aa16.19■□□□□ 0.18
HERPUD1-219ENST00000570273 SCNN1AP37088 669 aa16.19■□□□□ 0.18
HERPUD1-219ENST00000570273 HADHBP55084 474 aaKnown RBP16.19■□□□□ 0.18
HERPUD1-219ENST00000570273 MRPS5P82675 430 aaKnown RBP16.19■□□□□ 0.18
HERPUD1-219ENST00000570273 SLC26A9Q7LBE3 791 aa16.19■□□□□ 0.18
HERPUD1-219ENST00000570273 TCEAL8Q8IYN2 117 aa16.19■□□□□ 0.18
HERPUD1-219ENST00000570273 NUP93Q8N1F7 819 aa16.19■□□□□ 0.18
HERPUD1-219ENST00000570273 FEZF2Q8TBJ5 459 aa16.19■□□□□ 0.18
HERPUD1-219ENST00000570273 GPR152Q8TDT2 470 aa16.19■□□□□ 0.18
HERPUD1-219ENST00000570273 GIPC2Q8TF65 315 aa16.19■□□□□ 0.18
HERPUD1-219ENST00000570273 CALR3Q96L12 384 aaKnown RBP16.19■□□□□ 0.18
HERPUD1-219ENST00000570273 FBXW11Q9UKB1 542 aa16.19■□□□□ 0.18
HERPUD1-219ENST00000570273 SIGLEC16A6NMB1 481 aa16.19■□□□□ 0.18
HERPUD1-219ENST00000570273 GRAP2O75791 330 aa16.19■□□□□ 0.18
HERPUD1-219ENST00000570273 RTN3O95197 1032 aaPredicted RBP16.19■□□□□ 0.18
HERPUD1-219ENST00000570273 SPATA31D3P0C874 917 aa16.19■□□□□ 0.18
HERPUD1-219ENST00000570273 ATF6P18850 670 aa16.19■□□□□ 0.18
HERPUD1-219ENST00000570273 ALDH1A3P47895 512 aa16.19■□□□□ 0.18
HERPUD1-219ENST00000570273 DAOAP59103 153 aa16.19■□□□□ 0.18
HERPUD1-219ENST00000570273 RNASE9P60153 205 aaKnown RBP16.19■□□□□ 0.18
HERPUD1-219ENST00000570273 GNG11P61952 73 aa16.19■□□□□ 0.18
HERPUD1-219ENST00000570273 ZNF569Q5MCW4 686 aa16.19■□□□□ 0.18
HERPUD1-219ENST00000570273 PPP1R15BQ5SWA1 713 aa16.19■□□□□ 0.18
HERPUD1-219ENST00000570273 SPATA31D4Q6ZUB0 917 aa16.19■□□□□ 0.18
HERPUD1-219ENST00000570273 DENND5BQ6ZUT9 1274 aa16.19■□□□□ 0.18
HERPUD1-219ENST00000570273 NYAP1Q6ZVC0 841 aa16.19■□□□□ 0.18
HERPUD1-219ENST00000570273 JOSD2Q8TAC2 188 aa16.19■□□□□ 0.18
HERPUD1-219ENST00000570273 SCAMP5Q8TAC9 235 aa16.19■□□□□ 0.18
HERPUD1-219ENST00000570273 NDRG1Q92597 394 aaKnown RBP16.19■□□□□ 0.18
HERPUD1-219ENST00000570273 FAM149B1Q96BN6 582 aa16.19■□□□□ 0.18
HERPUD1-219ENST00000570273 BTBD6Q96KE9 485 aa16.19■□□□□ 0.18
HERPUD1-219ENST00000570273 TRIM7Q9C029 511 aa16.19■□□□□ 0.18
HERPUD1-219ENST00000570273 INSL5Q9Y5Q6 135 aa16.19■□□□□ 0.18
HERPUD1-219ENST00000570273 CDH23Q9H251 3354 aa16.18■□□□□ 0.18
HERPUD1-219ENST00000570273 PATJQ8NI35 1801 aa16.18■□□□□ 0.18
HERPUD1-219ENST00000570273 MYH10P35580 1976 aa16.18■□□□□ 0.18
HERPUD1-219ENST00000570273 GRID2IPA4D2P6 1211 aa16.18■□□□□ 0.18
HERPUD1-219ENST00000570273 SLC38A8A6NNN8 435 aa16.18■□□□□ 0.18
HERPUD1-219ENST00000570273 BUB1BO60566 1050 aaPredicted RBP16.18■□□□□ 0.18
HERPUD1-219ENST00000570273 HSF2BPO75031 334 aa16.18■□□□□ 0.18
HERPUD1-219ENST00000570273 CLASP2O75122 1294 aaKnown RBP16.18■□□□□ 0.18
HERPUD1-219ENST00000570273 DAB1O75553 588 aa16.18■□□□□ 0.18
HERPUD1-219ENST00000570273 PALMO75781 387 aa16.18■□□□□ 0.18
HERPUD1-219ENST00000570273 RPL7AP62424 266 aaKnown RBP16.18■□□□□ 0.18
HERPUD1-219ENST00000570273 TWF1Q12792 350 aa16.18■□□□□ 0.18
HERPUD1-219ENST00000570273 PLD1Q13393 1074 aa16.18■□□□□ 0.18
HERPUD1-219ENST00000570273 MESDQ14696 234 aa16.18■□□□□ 0.18
HERPUD1-219ENST00000570273 VEPH1Q14D04 833 aa16.18■□□□□ 0.18
HERPUD1-219ENST00000570273 TAF5Q15542 800 aa16.18■□□□□ 0.18
HERPUD1-219ENST00000570273 EFHC1Q5JVL4 640 aa16.18■□□□□ 0.18
HERPUD1-219ENST00000570273 LILRA6Q6PI73 481 aa16.18■□□□□ 0.18
HERPUD1-219ENST00000570273 CCDC149Q6ZUS6 474 aa16.18■□□□□ 0.18
HERPUD1-219ENST00000570273 SCML4Q8N228 414 aa16.18■□□□□ 0.18
HERPUD1-219ENST00000570273 SLC35F6Q8N357 371 aa16.18■□□□□ 0.18
HERPUD1-219ENST00000570273 EMC1Q8N766 993 aa16.18■□□□□ 0.18
HERPUD1-219ENST00000570273 KREMEN2Q8NCW0 462 aa16.18■□□□□ 0.18
HERPUD1-219ENST00000570273 TRIM58Q8NG06 486 aa16.18■□□□□ 0.18
HERPUD1-219ENST00000570273 SLC7A14Q8TBB6 771 aa16.18■□□□□ 0.18
HERPUD1-219ENST00000570273 IRGQQ8WZA9 623 aa16.18■□□□□ 0.18
HERPUD1-219ENST00000570273 GOLGA1Q92805 767 aa16.18■□□□□ 0.18
HERPUD1-219ENST00000570273 CEP295NLQ96MC4 621 aa16.18■□□□□ 0.18
HERPUD1-219ENST00000570273 FBXO44Q9H4M3 255 aa16.18■□□□□ 0.18
HERPUD1-219ENST00000570273 ASNSD1Q9NWL6 643 aa16.18■□□□□ 0.18
HERPUD1-219ENST00000570273 USP3Q9Y6I4 520 aa16.18■□□□□ 0.18
HERPUD1-219ENST00000570273 COL4A4P53420 1690 aaPredicted RBP16.17■□□□□ 0.18
HERPUD1-219ENST00000570273 TMEM191CA6NGB0 347 aa16.17■□□□□ 0.18
HERPUD1-219ENST00000570273 MYO1FO00160 1098 aa16.17■□□□□ 0.18
HERPUD1-219ENST00000570273 RFXAPO00287 272 aa16.17■□□□□ 0.18
HERPUD1-219ENST00000570273 C8AP07357 584 aa16.17■□□□□ 0.18
HERPUD1-219ENST00000570273 YWHAQP27348 245 aa16.17■□□□□ 0.18
HERPUD1-219ENST00000570273 RFC1P35251 1148 aaPredicted RBP16.17■□□□□ 0.18
HERPUD1-219ENST00000570273 CLCN4P51793 760 aa16.17■□□□□ 0.18
HERPUD1-219ENST00000570273 EPHB3P54753 998 aa16.17■□□□□ 0.18
HERPUD1-219ENST00000570273 USP46P62068 366 aa16.17■□□□□ 0.18
HERPUD1-219ENST00000570273 MTMR3Q13615 1198 aa16.17■□□□□ 0.18
HERPUD1-219ENST00000570273 PTPROQ16827 1216 aa16.17■□□□□ 0.18
HERPUD1-219ENST00000570273 C11orf63Q6NUN7 778 aa16.17■□□□□ 0.18
HERPUD1-219ENST00000570273 DAAM2Q86T65 1068 aa16.17■□□□□ 0.18
HERPUD1-219ENST00000570273 SYCE1Q8N0S2 351 aa16.17■□□□□ 0.18
HERPUD1-219ENST00000570273 FBXO32Q969P5 355 aa16.17■□□□□ 0.18
HERPUD1-219ENST00000570273 GOLPH3Q9H4A6 298 aa16.17■□□□□ 0.18
HERPUD1-219ENST00000570273 COMMD8Q9NX08 183 aa16.17■□□□□ 0.18
HERPUD1-219ENST00000570273 LCMT1Q9UIC8 334 aa16.17■□□□□ 0.18
HERPUD1-219ENST00000570273 TMEM59LQ9UK28 342 aa16.17■□□□□ 0.18
HERPUD1-219ENST00000570273 MAGED2Q9UNF1 606 aaPredicted RBP16.17■□□□□ 0.18
HERPUD1-219ENST00000570273 YJEFN3A6XGL0 299 aa16.16■□□□□ 0.18
HERPUD1-219ENST00000570273 E7ENQ6 273 aa16.16■□□□□ 0.18
HERPUD1-219ENST00000570273 KIF2AO00139 706 aaPredicted RBP16.16■□□□□ 0.18
HERPUD1-219ENST00000570273 FTCDO95954 541 aa16.16■□□□□ 0.18
HERPUD1-219ENST00000570273 LRG1P02750 347 aa16.16■□□□□ 0.18
HERPUD1-219ENST00000570273 LTFP02788 710 aa16.16■□□□□ 0.18
HERPUD1-219ENST00000570273 GLI1P08151 1106 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms