RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 IRX4P78413 519 aa16■□□□□ 0.15
COMMD4-223ENST00000568301 TRPC3Q13507 836 aa16■□□□□ 0.15
COMMD4-223ENST00000568301 COL9A2Q14055 689 aaPredicted RBP16■□□□□ 0.15
COMMD4-223ENST00000568301 HSF5Q4G112 596 aaPredicted RBP16■□□□□ 0.15
COMMD4-223ENST00000568301 ANO7Q6IWH7 933 aa16■□□□□ 0.15
COMMD4-223ENST00000568301 RHBDF2Q6PJF5 856 aa16■□□□□ 0.15
COMMD4-223ENST00000568301 SHC4Q6S5L8 630 aa16■□□□□ 0.15
COMMD4-223ENST00000568301 UNC13DQ70J99 1090 aa16■□□□□ 0.15
COMMD4-223ENST00000568301 B3GALNT2Q8NCR0 500 aa16■□□□□ 0.15
COMMD4-223ENST00000568301 PDZD8Q8NEN9 1154 aa16■□□□□ 0.15
COMMD4-223ENST00000568301 OVCA2Q8WZ82 227 aa16■□□□□ 0.15
COMMD4-223ENST00000568301 SYAP1Q96A49 352 aaPredicted RBP16■□□□□ 0.15
COMMD4-223ENST00000568301 B3GNT5Q9BYG0 378 aa16■□□□□ 0.15
COMMD4-223ENST00000568301 ADAM33Q9BZ11 813 aa16■□□□□ 0.15
COMMD4-223ENST00000568301 ZNF518BQ9C0D4 1074 aa16■□□□□ 0.15
COMMD4-223ENST00000568301 XYLT2Q9H1B5 865 aa16■□□□□ 0.15
COMMD4-223ENST00000568301 TMEM30AQ9NV96 361 aa16■□□□□ 0.15
COMMD4-223ENST00000568301 SMPD4Q9NXE4 827 aa16■□□□□ 0.15
COMMD4-223ENST00000568301 CFAP97Q9P2B7 532 aa16■□□□□ 0.15
COMMD4-223ENST00000568301 ASCC3Q8N3C0 2202 aaKnown RBP16■□□□□ 0.15
COMMD4-223ENST00000568301 E2F8A0AVK6 867 aa15.99■□□□□ 0.15
COMMD4-223ENST00000568301 ALDH1A2O94788 518 aa15.99■□□□□ 0.15
COMMD4-223ENST00000568301 ADH1CP00326 375 aa15.99■□□□□ 0.15
COMMD4-223ENST00000568301 CEACAM1P13688 526 aa15.99■□□□□ 0.15
COMMD4-223ENST00000568301 YWHAQP27348 245 aa15.99■□□□□ 0.15
COMMD4-223ENST00000568301 CACNA2D1P54289 1103 aa15.99■□□□□ 0.15
COMMD4-223ENST00000568301 MYL6P60660 151 aa15.99■□□□□ 0.15
COMMD4-223ENST00000568301 BMT2Q1RMZ1 405 aa15.99■□□□□ 0.15
COMMD4-223ENST00000568301 CYP2U1Q7Z449 544 aa15.99■□□□□ 0.15
COMMD4-223ENST00000568301 NELFCDQ8IXH7 590 aa15.99■□□□□ 0.15
COMMD4-223ENST00000568301 CCDC33Q8N5R6 958 aa15.99■□□□□ 0.15
COMMD4-223ENST00000568301 MDGA1Q8NFP4 955 aa15.99■□□□□ 0.15
COMMD4-223ENST00000568301 OLIG1Q8TAK6 271 aa15.99■□□□□ 0.15
COMMD4-223ENST00000568301 OTUB2Q96DC9 234 aa15.99■□□□□ 0.15
COMMD4-223ENST00000568301 SCNM1Q9BWG6 230 aa15.99■□□□□ 0.15
COMMD4-223ENST00000568301 GZF1Q9H116 711 aaPredicted RBP15.99■□□□□ 0.15
COMMD4-223ENST00000568301 DPEP3Q9H4B8 488 aa15.99■□□□□ 0.15
COMMD4-223ENST00000568301 VRTNQ9H8Y1 702 aa15.99■□□□□ 0.15
COMMD4-223ENST00000568301 NXF1Q9UBU9 619 aaKnown RBP15.99■□□□□ 0.15
COMMD4-223ENST00000568301 GON4LQ3T8J9 2241 aa15.99■□□□□ 0.15
COMMD4-223ENST00000568301 PI4KAP42356 2102 aa15.98■□□□□ 0.15
COMMD4-223ENST00000568301 PVALEFA0A1B0GWK0 134 aa15.98■□□□□ 0.15
COMMD4-223ENST00000568301 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.98■□□□□ 0.15
COMMD4-223ENST00000568301 K7ELQ4 463 aaPredicted RBP15.98■□□□□ 0.15
COMMD4-223ENST00000568301 KAT7O95251 611 aa15.98■□□□□ 0.15
COMMD4-223ENST00000568301 APODP05090 189 aa15.98■□□□□ 0.15
COMMD4-223ENST00000568301 MBL2P11226 248 aaPredicted RBP15.98■□□□□ 0.15
COMMD4-223ENST00000568301 HNRNPLP14866 589 aaKnown RBP eCLIP15.98■□□□□ 0.15
COMMD4-223ENST00000568301 CSRP1P21291 193 aaKnown RBP15.98■□□□□ 0.15
COMMD4-223ENST00000568301 GRIA2P42262 883 aa15.98■□□□□ 0.15
COMMD4-223ENST00000568301 TNFRSF4P43489 277 aa15.98■□□□□ 0.15
COMMD4-223ENST00000568301 SLC6A11P48066 632 aa15.98■□□□□ 0.15
COMMD4-223ENST00000568301 DHPSP49366 369 aaPredicted RBP15.98■□□□□ 0.15
COMMD4-223ENST00000568301 AP3M2P53677 418 aa15.98■□□□□ 0.15
COMMD4-223ENST00000568301 KNOP1Q1ED39 458 aaKnown RBP15.98■□□□□ 0.15
COMMD4-223ENST00000568301 UAP1L1Q3KQV9 507 aa15.98■□□□□ 0.15
COMMD4-223ENST00000568301 SNX30Q5VWJ9 437 aa15.98■□□□□ 0.15
COMMD4-223ENST00000568301 TMEM92Q6UXU6 159 aa15.98■□□□□ 0.15
COMMD4-223ENST00000568301 PKD1L2Q7Z442 2459 aa15.98■□□□□ 0.15
COMMD4-223ENST00000568301 SFTPA1Q8IWL2 248 aa15.98■□□□□ 0.15
COMMD4-223ENST00000568301 IL17RCQ8NAC3 791 aa15.98■□□□□ 0.15
COMMD4-223ENST00000568301 DEFB124Q8NES8 71 aa15.98■□□□□ 0.15
COMMD4-223ENST00000568301 PIGKQ92643 395 aa15.98■□□□□ 0.15
COMMD4-223ENST00000568301 GATA6Q92908 595 aa15.98■□□□□ 0.15
COMMD4-223ENST00000568301 DUSP9Q99956 384 aaKnown RBP15.98■□□□□ 0.15
COMMD4-223ENST00000568301 FOXD4L1Q9NU39 408 aa15.98■□□□□ 0.15
COMMD4-223ENST00000568301 COMMD8Q9NX08 183 aa15.98■□□□□ 0.15
COMMD4-223ENST00000568301 IL37Q9NZH6 218 aa15.98■□□□□ 0.15
COMMD4-223ENST00000568301 ATP8B3O60423 1300 aa15.97■□□□□ 0.15
COMMD4-223ENST00000568301 MYH10P35580 1976 aa15.97■□□□□ 0.15
COMMD4-223ENST00000568301 CLDN5O00501 218 aa15.97■□□□□ 0.15
COMMD4-223ENST00000568301 POLR2DO15514 142 aaKnown RBP15.97■□□□□ 0.15
COMMD4-223ENST00000568301 PHACTR2O75167 634 aa15.97■□□□□ 0.15
COMMD4-223ENST00000568301 CHRM1P11229 460 aaPredicted RBP15.97■□□□□ 0.15
COMMD4-223ENST00000568301 ADH5P11766 374 aa15.97■□□□□ 0.15
COMMD4-223ENST00000568301 PDIA4P13667 645 aaKnown RBP15.97■□□□□ 0.15
COMMD4-223ENST00000568301 KIR2DL1P43626 348 aaPredicted RBP15.97■□□□□ 0.15
COMMD4-223ENST00000568301 TUBP50607 506 aa15.97■□□□□ 0.15
COMMD4-223ENST00000568301 CLDN10P78369 228 aa15.97■□□□□ 0.15
COMMD4-223ENST00000568301 EOGTQ5NDL2 527 aa15.97■□□□□ 0.15
COMMD4-223ENST00000568301 HECTD3Q5T447 861 aa15.97■□□□□ 0.15
COMMD4-223ENST00000568301 TTC30AQ86WT1 665 aa15.97■□□□□ 0.15
COMMD4-223ENST00000568301 ALLCQ8N6M5 410 aa15.97■□□□□ 0.15
COMMD4-223ENST00000568301 TXNDC5Q8NBS9 432 aaKnown RBP15.97■□□□□ 0.15
COMMD4-223ENST00000568301 GOLGA5Q8TBA6 731 aa15.97■□□□□ 0.15
COMMD4-223ENST00000568301 KCNV2Q8TDN2 545 aa15.97■□□□□ 0.15
COMMD4-223ENST00000568301 RLN3Q8WXF3 142 aa15.97■□□□□ 0.15
COMMD4-223ENST00000568301 FBXO32Q969P5 355 aa15.97■□□□□ 0.15
COMMD4-223ENST00000568301 TNIP3Q96KP6 325 aa15.97■□□□□ 0.15
COMMD4-223ENST00000568301 KCNK16Q96T55 309 aa15.97■□□□□ 0.15
COMMD4-223ENST00000568301 ARHGEF4Q9NR80 690 aa15.97■□□□□ 0.15
COMMD4-223ENST00000568301 CHORDC1Q9UHD1 332 aaPredicted RBP15.97■□□□□ 0.15
COMMD4-223ENST00000568301 PLXND1Q9Y4D7 1925 aa15.97■□□□□ 0.15
COMMD4-223ENST00000568301 PCNX2A6NKB5 2137 aa15.97■□□□□ 0.15
COMMD4-223ENST00000568301 ITPR1Q14643 2758 aa15.96■□□□□ 0.15
COMMD4-223ENST00000568301 LOC400499M0QZD8 3231 aa15.96■□□□□ 0.15
COMMD4-223ENST00000568301 FAM92AA1XBS5 289 aa15.96■□□□□ 0.15
COMMD4-223ENST00000568301 TNFRSF10BO14763 440 aa15.96■□□□□ 0.15
COMMD4-223ENST00000568301 COCHO43405 550 aa15.96■□□□□ 0.15
COMMD4-223ENST00000568301 EXOC3O60645 756 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms