RNA–Protein interactions for RNA: ENST00000568023.1

CDH5-206, Transcript of cadherin 5, humanhuman

TSL 4

Gene CDH5, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-206ENST00000568023 BDNFP23560 247 aa11.83□□□□□ -0.52
CDH5-206ENST00000568023 PCK1P35558 622 aa11.83□□□□□ -0.52
CDH5-206ENST00000568023 PPM1AP35813 382 aa11.83□□□□□ -0.52
CDH5-206ENST00000568023 PTPN9P43378 593 aa11.83□□□□□ -0.52
CDH5-206ENST00000568023 MARCKSL1P49006 195 aa11.83□□□□□ -0.52
CDH5-206ENST00000568023 COPS2P61201 443 aa11.83□□□□□ -0.52
CDH5-206ENST00000568023 MRPS5P82675 430 aaKnown RBP11.83□□□□□ -0.52
CDH5-206ENST00000568023 OGDHQ02218 1023 aa11.83□□□□□ -0.52
CDH5-206ENST00000568023 ZNF252P-AS1Q0IIN9 211 aa11.83□□□□□ -0.52
CDH5-206ENST00000568023 ZNF211Q13398 564 aaPredicted RBP11.83□□□□□ -0.52
CDH5-206ENST00000568023 DCAF12L1Q5VU92 463 aa11.83□□□□□ -0.52
CDH5-206ENST00000568023 FAM109BQ6ICB4 259 aaPredicted RBP11.83□□□□□ -0.52
CDH5-206ENST00000568023 RNF168Q8IYW5 571 aaPredicted RBP11.83□□□□□ -0.52
CDH5-206ENST00000568023 RCOR2Q8IZ40 523 aa11.83□□□□□ -0.52
CDH5-206ENST00000568023 C2orf15Q8WU43 125 aaKnown RBP11.83□□□□□ -0.52
CDH5-206ENST00000568023 FAM149B1Q96BN6 582 aa11.83□□□□□ -0.52
CDH5-206ENST00000568023 TMEM169Q96HH4 297 aa11.83□□□□□ -0.52
CDH5-206ENST00000568023 RUNDC3BQ96NL0 473 aa11.83□□□□□ -0.52
CDH5-206ENST00000568023 SMOQ99835 787 aa11.83□□□□□ -0.52
CDH5-206ENST00000568023 UBE2OQ9C0C9 1292 aaKnown RBP11.83□□□□□ -0.52
CDH5-206ENST00000568023 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.83□□□□□ -0.52
CDH5-206ENST00000568023 EHD2Q9NZN4 543 aa11.83□□□□□ -0.52
CDH5-206ENST00000568023 STAP1Q9ULZ2 295 aa11.83□□□□□ -0.52
CDH5-206ENST00000568023 PCDHB5Q9Y5E4 795 aa11.83□□□□□ -0.52
CDH5-206ENST00000568023 PLXNA3P51805 1871 aa11.83□□□□□ -0.52
CDH5-206ENST00000568023 COL4A4P53420 1690 aaPredicted RBP11.82□□□□□ -0.52
CDH5-206ENST00000568023 TARSL2A2RTX5 802 aaKnown RBP11.82□□□□□ -0.52
CDH5-206ENST00000568023 LCHNA4D1U4 455 aa11.82□□□□□ -0.52
CDH5-206ENST00000568023 PRPSAP2O60256 369 aa11.82□□□□□ -0.52
CDH5-206ENST00000568023 LRCH4O75427 683 aa11.82□□□□□ -0.52
CDH5-206ENST00000568023 GRAP2O75791 330 aa11.82□□□□□ -0.52
CDH5-206ENST00000568023 PYGMP11217 842 aa11.82□□□□□ -0.52
CDH5-206ENST00000568023 GRIK1P39086 918 aa11.82□□□□□ -0.52
CDH5-206ENST00000568023 TAS2R40P59535 323 aa11.82□□□□□ -0.52
CDH5-206ENST00000568023 YWHAZP63104 245 aaKnown RBP11.82□□□□□ -0.52
CDH5-206ENST00000568023 CCDC142Q17RM4 750 aa11.82□□□□□ -0.52
CDH5-206ENST00000568023 USP41Q3LFD5 358 aa11.82□□□□□ -0.52
CDH5-206ENST00000568023 KIAA1841Q6NSI8 718 aa11.82□□□□□ -0.52
CDH5-206ENST00000568023 KCNT2Q6UVM3 1135 aa11.82□□□□□ -0.52
CDH5-206ENST00000568023 VSTM1Q6UX27 236 aa11.82□□□□□ -0.52
CDH5-206ENST00000568023 TMEM173Q86WV6 379 aaPredicted RBP11.82□□□□□ -0.52
CDH5-206ENST00000568023 SLC39A11Q8N1S5 342 aa11.82□□□□□ -0.52
CDH5-206ENST00000568023 SCML4Q8N228 414 aa11.82□□□□□ -0.52
CDH5-206ENST00000568023 COLGALT1Q8NBJ5 622 aa11.82□□□□□ -0.52
CDH5-206ENST00000568023 CCDC26Q8TAB7 109 aa11.82□□□□□ -0.52
CDH5-206ENST00000568023 BCL7CQ8WUZ0 217 aaPredicted RBP11.82□□□□□ -0.52
CDH5-206ENST00000568023 IRGQQ8WZA9 623 aa11.82□□□□□ -0.52
CDH5-206ENST00000568023 IGSF21Q96ID5 467 aa11.82□□□□□ -0.52
CDH5-206ENST00000568023 GPR62Q9BZJ7 368 aa11.82□□□□□ -0.52
CDH5-206ENST00000568023 RBM12Q9NTZ6 932 aaKnown RBP11.82□□□□□ -0.52
CDH5-206ENST00000568023 ABI2Q9NYB9 513 aaPredicted RBP11.82□□□□□ -0.52
CDH5-206ENST00000568023 RRN3Q9NYV6 651 aa11.82□□□□□ -0.52
CDH5-206ENST00000568023 NT5C1B-RDH14C9J2C7 533 aa11.81□□□□□ -0.52
CDH5-206ENST00000568023 CAPN9O14815 690 aa11.81□□□□□ -0.52
CDH5-206ENST00000568023 TLL1O43897 1013 aa11.81□□□□□ -0.52
CDH5-206ENST00000568023 BEST1O76090 585 aa11.81□□□□□ -0.52
CDH5-206ENST00000568023 ZBED1O96006 694 aa11.81□□□□□ -0.52
CDH5-206ENST00000568023 RHOXF2BP0C7M4 288 aa11.81□□□□□ -0.52
CDH5-206ENST00000568023 NOS2P35228 1153 aa11.81□□□□□ -0.52
CDH5-206ENST00000568023 FLT3P36888 993 aa11.81□□□□□ -0.52
CDH5-206ENST00000568023 PBX3P40426 434 aa11.81□□□□□ -0.52
CDH5-206ENST00000568023 MATKP42679 507 aa11.81□□□□□ -0.52
CDH5-206ENST00000568023 MAGEA11P43364 429 aa11.81□□□□□ -0.52
CDH5-206ENST00000568023 SLC25A11Q02978 314 aaKnown RBP11.81□□□□□ -0.52
CDH5-206ENST00000568023 MRPL58Q14197 206 aaKnown RBP11.81□□□□□ -0.52
CDH5-206ENST00000568023 CDO1Q16878 200 aa11.81□□□□□ -0.52
CDH5-206ENST00000568023 RAB41Q5JT25 222 aa11.81□□□□□ -0.52
CDH5-206ENST00000568023 STRADAQ7RTN6 431 aa11.81□□□□□ -0.52
CDH5-206ENST00000568023 CPNE8Q86YQ8 564 aa11.81□□□□□ -0.52
CDH5-206ENST00000568023 SLC13A5Q86YT5 568 aaPredicted RBP11.81□□□□□ -0.52
CDH5-206ENST00000568023 FIBCD1Q8N539 461 aa11.81□□□□□ -0.52
CDH5-206ENST00000568023 NOA1Q8NC60 698 aaKnown RBP11.81□□□□□ -0.52
CDH5-206ENST00000568023 SPPL2BQ8TCT7 592 aa11.81□□□□□ -0.52
CDH5-206ENST00000568023 CLEC4CQ8WTT0 213 aa11.81□□□□□ -0.52
CDH5-206ENST00000568023 FAM172AQ8WUF8 416 aa11.81□□□□□ -0.52
CDH5-206ENST00000568023 CFAP57Q96MR6 1250 aa11.81□□□□□ -0.52
CDH5-206ENST00000568023 TMEM209Q96SK2 561 aa11.81□□□□□ -0.52
CDH5-206ENST00000568023 TBCBQ99426 244 aa11.81□□□□□ -0.52
CDH5-206ENST00000568023 RHOXF2Q9BQY4 288 aa11.81□□□□□ -0.52
CDH5-206ENST00000568023 ZBED2Q9BTP6 218 aa11.81□□□□□ -0.52
CDH5-206ENST00000568023 VN1R3Q9BXE9 311 aa11.81□□□□□ -0.52
CDH5-206ENST00000568023 SLITRK6Q9H5Y7 841 aa11.81□□□□□ -0.52
CDH5-206ENST00000568023 ZWILCHQ9H900 591 aa11.81□□□□□ -0.52
CDH5-206ENST00000568023 POPDC2Q9HBU9 364 aa11.81□□□□□ -0.52
CDH5-206ENST00000568023 NGRNQ9NPE2 291 aaKnown RBP11.81□□□□□ -0.52
CDH5-206ENST00000568023 HOMER3Q9NSC5 361 aa11.81□□□□□ -0.52
CDH5-206ENST00000568023 TMLHEQ9NVH6 421 aa11.81□□□□□ -0.52
CDH5-206ENST00000568023 SMARCAL1Q9NZC9 954 aa11.81□□□□□ -0.52
CDH5-206ENST00000568023 SPG21Q9NZD8 308 aa11.81□□□□□ -0.52
CDH5-206ENST00000568023 USP18Q9UMW8 372 aa11.81□□□□□ -0.52
CDH5-206ENST00000568023 PCDHA11Q9Y5I1 949 aa11.81□□□□□ -0.52
CDH5-206ENST00000568023 MTCL1Q9Y4B5 1905 aaKnown RBP11.8□□□□□ -0.52
CDH5-206ENST00000568023 LRRD1A4D1F6 860 aa11.8□□□□□ -0.52
CDH5-206ENST00000568023 LINC01553A4QN01 128 aa11.8□□□□□ -0.52
CDH5-206ENST00000568023 GRXCR1A8MXD5 290 aa11.8□□□□□ -0.52
CDH5-206ENST00000568023 ERLIN1O75477 346 aa11.8□□□□□ -0.52
CDH5-206ENST00000568023 ARHGEF15O94989 841 aa11.8□□□□□ -0.52
CDH5-206ENST00000568023 TRUB2O95900 331 aaKnown RBP11.8□□□□□ -0.52
CDH5-206ENST00000568023 LTFP02788 710 aa11.8□□□□□ -0.52
CDH5-206ENST00000568023 SOD2P04179 222 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms