RNA–Protein interactions for RNA: ENST00000566561.1

KLHDC4-216, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-216ENST00000566561 NT5C1AQ9BXI3 368 aa13.12□□□□□ -0.31
KLHDC4-216ENST00000566561 NIF3L1Q9GZT8 377 aa13.12□□□□□ -0.31
KLHDC4-216ENST00000566561 RNF38Q9H0F5 515 aa13.12□□□□□ -0.31
KLHDC4-216ENST00000566561 CYP3A43Q9HB55 503 aa13.12□□□□□ -0.31
KLHDC4-216ENST00000566561 APOBEC3GQ9HC16 384 aaKnown RBP13.12□□□□□ -0.31
KLHDC4-216ENST00000566561 SMPD4Q9NXE4 827 aa13.12□□□□□ -0.31
KLHDC4-216ENST00000566561 CHORDC1Q9UHD1 332 aaPredicted RBP13.12□□□□□ -0.31
KLHDC4-216ENST00000566561 DCDC2BA2VCK2 349 aa13.11□□□□□ -0.31
KLHDC4-216ENST00000566561 TRDMT1O14717 391 aaKnown RBP13.11□□□□□ -0.31
KLHDC4-216ENST00000566561 ADRB1P08588 477 aa13.11□□□□□ -0.31
KLHDC4-216ENST00000566561 FAM200BP0CF97 657 aa13.11□□□□□ -0.31
KLHDC4-216ENST00000566561 MBL2P11226 248 aaPredicted RBP13.11□□□□□ -0.31
KLHDC4-216ENST00000566561 GJA4P35212 333 aa13.11□□□□□ -0.31
KLHDC4-216ENST00000566561 MXI1P50539 228 aa13.11□□□□□ -0.31
KLHDC4-216ENST00000566561 MAP3K7CLP57077 242 aa13.11□□□□□ -0.31
KLHDC4-216ENST00000566561 SLC7A9P82251 487 aa13.11□□□□□ -0.31
KLHDC4-216ENST00000566561 FKBP3Q00688 224 aaKnown RBP13.11□□□□□ -0.31
KLHDC4-216ENST00000566561 CCINQ13939 588 aa13.11□□□□□ -0.31
KLHDC4-216ENST00000566561 TMEM196Q5HYL7 178 aa13.11□□□□□ -0.31
KLHDC4-216ENST00000566561 ANKRD40Q6AI12 368 aa13.11□□□□□ -0.31
KLHDC4-216ENST00000566561 LAIR1Q6GTX8 287 aa13.11□□□□□ -0.31
KLHDC4-216ENST00000566561 SYNPOQ8N3V7 929 aa13.11□□□□□ -0.31
KLHDC4-216ENST00000566561 FBXL13Q8NEE6 735 aa13.11□□□□□ -0.31
KLHDC4-216ENST00000566561 SCAMP5Q8TAC9 235 aa13.11□□□□□ -0.31
KLHDC4-216ENST00000566561 SPATA20Q8TB22 786 aa13.11□□□□□ -0.31
KLHDC4-216ENST00000566561 NETO1Q8TDF5 533 aa13.11□□□□□ -0.31
KLHDC4-216ENST00000566561 OVCA2Q8WZ82 227 aa13.11□□□□□ -0.31
KLHDC4-216ENST00000566561 JAKMIP2Q96AA8 810 aa13.11□□□□□ -0.31
KLHDC4-216ENST00000566561 CYFIP2Q96F07 1278 aa13.11□□□□□ -0.31
KLHDC4-216ENST00000566561 SMOQ99835 787 aa13.11□□□□□ -0.31
KLHDC4-216ENST00000566561 P2RY13Q9BPV8 354 aa13.11□□□□□ -0.31
KLHDC4-216ENST00000566561 LINC00597Q9H2U6 94 aa13.11□□□□□ -0.31
KLHDC4-216ENST00000566561 RAB20Q9NX57 234 aa13.11□□□□□ -0.31
KLHDC4-216ENST00000566561 CPQQ9Y646 472 aa13.11□□□□□ -0.31
KLHDC4-216ENST00000566561 TRIM49BA6NDI0 452 aa13.1□□□□□ -0.31
KLHDC4-216ENST00000566561 TNFRSF10BO14763 440 aa13.1□□□□□ -0.31
KLHDC4-216ENST00000566561 PSMA7O14818 248 aa13.1□□□□□ -0.31
KLHDC4-216ENST00000566561 SLC16A3O15427 465 aaKnown RBP13.1□□□□□ -0.31
KLHDC4-216ENST00000566561 LRP3O75074 770 aa13.1□□□□□ -0.31
KLHDC4-216ENST00000566561 BEST1O76090 585 aa13.1□□□□□ -0.31
KLHDC4-216ENST00000566561 NFATC1O95644 943 aa13.1□□□□□ -0.31
KLHDC4-216ENST00000566561 OAS1P00973 400 aaKnown RBP13.1□□□□□ -0.31
KLHDC4-216ENST00000566561 TCF3P15923 654 aa13.1□□□□□ -0.31
KLHDC4-216ENST00000566561 GALK1P51570 392 aa13.1□□□□□ -0.31
KLHDC4-216ENST00000566561 PMS1P54277 932 aaKnown RBP13.1□□□□□ -0.31
KLHDC4-216ENST00000566561 ZXDBP98169 803 aa13.1□□□□□ -0.31
KLHDC4-216ENST00000566561 LRRC63Q05C16 580 aa13.1□□□□□ -0.31
KLHDC4-216ENST00000566561 INCA1Q0VD86 236 aa13.1□□□□□ -0.31
KLHDC4-216ENST00000566561 EML3Q32P44 896 aa13.1□□□□□ -0.31
KLHDC4-216ENST00000566561 ZNF394Q53GI3 561 aa13.1□□□□□ -0.31
KLHDC4-216ENST00000566561 FSTL4Q6MZW2 842 aa13.1□□□□□ -0.31
KLHDC4-216ENST00000566561 DDX42Q86XP3 938 aaKnown RBP eCLIP13.1□□□□□ -0.31
KLHDC4-216ENST00000566561 ZMIZ2Q8NF64 920 aa13.1□□□□□ -0.31
KLHDC4-216ENST00000566561 SEMA4DQ92854 862 aa13.1□□□□□ -0.31
KLHDC4-216ENST00000566561 CD101Q93033 1021 aa13.1□□□□□ -0.31
KLHDC4-216ENST00000566561 CHFRQ96EP1 664 aa13.1□□□□□ -0.31
KLHDC4-216ENST00000566561 TWNKQ96RR1 684 aa13.1□□□□□ -0.31
KLHDC4-216ENST00000566561 NACA2Q9H009 215 aa13.1□□□□□ -0.31
KLHDC4-216ENST00000566561 COMMD8Q9NX08 183 aa13.1□□□□□ -0.31
KLHDC4-216ENST00000566561 GMIPQ9P107 970 aa13.1□□□□□ -0.31
KLHDC4-216ENST00000566561 CFAP97Q9P2B7 532 aa13.1□□□□□ -0.31
KLHDC4-216ENST00000566561 NUP210Q8TEM1 1887 aaPredicted RBP13.1□□□□□ -0.31
KLHDC4-216ENST00000566561 SLC9A3R1O14745 358 aaPredicted RBP13.09□□□□□ -0.31
KLHDC4-216ENST00000566561 SCAMP3O14828 347 aaKnown RBP13.09□□□□□ -0.31
KLHDC4-216ENST00000566561 COCHO43405 550 aa13.09□□□□□ -0.31
KLHDC4-216ENST00000566561 CILPO75339 1184 aa13.09□□□□□ -0.31
KLHDC4-216ENST00000566561 OLFM2O95897 454 aa13.09□□□□□ -0.31
KLHDC4-216ENST00000566561 EGFP01133 1207 aa13.09□□□□□ -0.31
KLHDC4-216ENST00000566561 TDGF1P13385 188 aa13.09□□□□□ -0.31
KLHDC4-216ENST00000566561 DRD1P21728 446 aa13.09□□□□□ -0.31
KLHDC4-216ENST00000566561 SPEM2Q0P670 501 aa13.09□□□□□ -0.31
KLHDC4-216ENST00000566561 PPM1JQ5JR12 505 aa13.09□□□□□ -0.31
KLHDC4-216ENST00000566561 HECTD3Q5T447 861 aa13.09□□□□□ -0.31
KLHDC4-216ENST00000566561 NAIF1Q69YI7 327 aaPredicted RBP13.09□□□□□ -0.31
KLHDC4-216ENST00000566561 HEATR6Q6AI08 1181 aaKnown RBP13.09□□□□□ -0.31
KLHDC4-216ENST00000566561 FILIP1Q7Z7B0 1213 aa13.09□□□□□ -0.31
KLHDC4-216ENST00000566561 ELOA2Q8IYF1 753 aaPredicted RBP13.09□□□□□ -0.31
KLHDC4-216ENST00000566561 DHTKD1Q96HY7 919 aaPredicted RBP13.09□□□□□ -0.31
KLHDC4-216ENST00000566561 HEXIM2Q96MH2 286 aaKnown RBP13.09□□□□□ -0.31
KLHDC4-216ENST00000566561 HNRNPABQ99729 332 aaKnown RBP13.09□□□□□ -0.31
KLHDC4-216ENST00000566561 FBXO44Q9H4M3 255 aa13.09□□□□□ -0.31
KLHDC4-216ENST00000566561 FBRSL1Q9HCM7 1045 aaKnown RBP13.09□□□□□ -0.31
KLHDC4-216ENST00000566561 CSNK1G1Q9HCP0 422 aa13.09□□□□□ -0.31
KLHDC4-216ENST00000566561 PARD6AQ9NPB6 346 aa13.09□□□□□ -0.31
KLHDC4-216ENST00000566561 IL37Q9NZH6 218 aa13.09□□□□□ -0.31
KLHDC4-216ENST00000566561 ARMCX3Q9UH62 379 aaPredicted RBP13.09□□□□□ -0.31
KLHDC4-216ENST00000566561 MAN1B1Q9UKM7 699 aa13.09□□□□□ -0.31
KLHDC4-216ENST00000566561 SDK1Q7Z5N4 2213 aa13.08□□□□□ -0.32
KLHDC4-216ENST00000566561 CEP295Q9C0D2 2601 aa13.08□□□□□ -0.32
KLHDC4-216ENST00000566561 CHURC1-FNTBB4DL54 471 aa13.08□□□□□ -0.32
KLHDC4-216ENST00000566561 SLC30A4O14863 429 aa13.08□□□□□ -0.32
KLHDC4-216ENST00000566561 ATG13O75143 517 aa13.08□□□□□ -0.32
KLHDC4-216ENST00000566561 RNF40O75150 1001 aa13.08□□□□□ -0.32
KLHDC4-216ENST00000566561 GADD45BO75293 160 aaPredicted RBP13.08□□□□□ -0.32
KLHDC4-216ENST00000566561 ACO1P21399 889 aaKnown RBP13.08□□□□□ -0.32
KLHDC4-216ENST00000566561 TGM1P22735 817 aa13.08□□□□□ -0.32
KLHDC4-216ENST00000566561 PPP1R2P41236 205 aa13.08□□□□□ -0.32
KLHDC4-216ENST00000566561 FNTBP49356 437 aa13.08□□□□□ -0.32
KLHDC4-216ENST00000566561 MCCD1P59942 119 aaPredicted RBP13.08□□□□□ -0.32
KLHDC4-216ENST00000566561 FBXO43Q4G163 708 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms