RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 TUBA4AP68366 448 aa5.85□□□□□ -1.47
UBR1-205ENST00000564540 SIRT6Q8N6T7 355 aa5.85□□□□□ -1.47
UBR1-205ENST00000564540 RSPRY1Q96DX4 576 aa5.85□□□□□ -1.47
UBR1-205ENST00000564540 USP22Q9UPT9 525 aa5.85□□□□□ -1.47
UBR1-205ENST00000564540 SETD1BQ9UPS6 1966 aaKnown RBP5.85□□□□□ -1.47
UBR1-205ENST00000564540 CES2O00748 559 aa5.84□□□□□ -1.47
UBR1-205ENST00000564540 EPHA3P29320 983 aa5.84□□□□□ -1.47
UBR1-205ENST00000564540 CPT1AP50416 773 aa5.84□□□□□ -1.47
UBR1-205ENST00000564540 RENBPP51606 427 aa5.84□□□□□ -1.47
UBR1-205ENST00000564540 STK3Q13188 491 aa5.84□□□□□ -1.47
UBR1-205ENST00000564540 KCNAB1Q14722 419 aa5.84□□□□□ -1.47
UBR1-205ENST00000564540 SRSF7Q16629 238 aaKnown RBP eCLIP5.84□□□□□ -1.47
UBR1-205ENST00000564540 ZNF750Q32MQ0 723 aa5.84□□□□□ -1.47
UBR1-205ENST00000564540 CEP78Q5JTW2 689 aa5.84□□□□□ -1.47
UBR1-205ENST00000564540 MTHFD1LQ6UB35 978 aa5.84□□□□□ -1.47
UBR1-205ENST00000564540 RITA1Q96K30 269 aa5.84□□□□□ -1.47
UBR1-205ENST00000564540 ASB2Q96Q27 587 aa5.84□□□□□ -1.47
UBR1-205ENST00000564540 SNX18Q96RF0 628 aa5.84□□□□□ -1.47
UBR1-205ENST00000564540 MMS19Q96T76 1030 aa5.84□□□□□ -1.47
UBR1-205ENST00000564540 VN1R3Q9BXE9 311 aa5.84□□□□□ -1.47
UBR1-205ENST00000564540 AS3MTQ9HBK9 375 aa5.84□□□□□ -1.47
UBR1-205ENST00000564540 METTL14Q9HCE5 456 aaKnown RBP5.84□□□□□ -1.47
UBR1-205ENST00000564540 AMFRQ9UKV5 643 aa5.84□□□□□ -1.47
UBR1-205ENST00000564540 WDR91A4D1P6 747 aa5.83□□□□□ -1.48
UBR1-205ENST00000564540 H7C1Q1 480 aa5.83□□□□□ -1.48
UBR1-205ENST00000564540 FGAP02671 866 aa5.83□□□□□ -1.48
UBR1-205ENST00000564540 PRR35P0CG20 571 aa5.83□□□□□ -1.48
UBR1-205ENST00000564540 BTF3P20290 206 aaKnown RBP5.83□□□□□ -1.48
UBR1-205ENST00000564540 EPHB2P29323 1055 aa5.83□□□□□ -1.48
UBR1-205ENST00000564540 CARSP49589 748 aaKnown RBP5.83□□□□□ -1.48
UBR1-205ENST00000564540 MTHFSP49914 203 aa5.83□□□□□ -1.48
UBR1-205ENST00000564540 TIRAPP58753 221 aa5.83□□□□□ -1.48
UBR1-205ENST00000564540 TIAL1Q01085 375 aaKnown RBP eCLIP5.83□□□□□ -1.48
UBR1-205ENST00000564540 EZH2Q15910 746 aaKnown RBP5.83□□□□□ -1.48
UBR1-205ENST00000564540 KIAA1614Q5VZ46 1190 aa5.83□□□□□ -1.48
UBR1-205ENST00000564540 YAF2Q8IY57 180 aa5.83□□□□□ -1.48
UBR1-205ENST00000564540 WDYHV1Q96HA8 205 aa5.83□□□□□ -1.48
UBR1-205ENST00000564540 MSLNLQ96KJ4 702 aa5.83□□□□□ -1.48
UBR1-205ENST00000564540 QTRT1Q9BXR0 403 aaKnown RBP5.83□□□□□ -1.48
UBR1-205ENST00000564540 SLC29A3Q9BZD2 475 aa5.83□□□□□ -1.48
UBR1-205ENST00000564540 DHX36Q9H2U1 1008 aaKnown RBP5.83□□□□□ -1.48
UBR1-205ENST00000564540 CORO2BQ9UQ03 480 aa5.83□□□□□ -1.48
UBR1-205ENST00000564540 TCRBV5S1A1TA0A578 114 aa5.82□□□□□ -1.48
UBR1-205ENST00000564540 SPRY2O43597 315 aa5.82□□□□□ -1.48
UBR1-205ENST00000564540 PARNO95453 639 aaKnown RBP5.82□□□□□ -1.48
UBR1-205ENST00000564540 MT-ND5P03915 603 aa5.82□□□□□ -1.48
UBR1-205ENST00000564540 PARP1P09874 1014 aaKnown RBP5.82□□□□□ -1.48
UBR1-205ENST00000564540 MYCLP12524 364 aaPredicted RBP5.82□□□□□ -1.48
UBR1-205ENST00000564540 TPH1P17752 444 aa5.82□□□□□ -1.48
UBR1-205ENST00000564540 NTSR1P30989 418 aa5.82□□□□□ -1.48
UBR1-205ENST00000564540 GATMP50440 423 aa5.82□□□□□ -1.48
UBR1-205ENST00000564540 PGDP52209 483 aa5.82□□□□□ -1.48
UBR1-205ENST00000564540 SUMO2P61956 95 aaKnown RBP5.82□□□□□ -1.48
UBR1-205ENST00000564540 SUPT20HL1Q3ZLR7 823 aa5.82□□□□□ -1.48
UBR1-205ENST00000564540 MTX3Q5HYI7 312 aa5.82□□□□□ -1.48
UBR1-205ENST00000564540 PLAG1Q6DJT9 500 aa5.82□□□□□ -1.48
UBR1-205ENST00000564540 SERPINA13PQ6UXR4 307 aa5.82□□□□□ -1.48
UBR1-205ENST00000564540 BCDIN3DQ7Z5W3 292 aaKnown RBP5.82□□□□□ -1.48
UBR1-205ENST00000564540 YTHDF3Q7Z739 585 aaKnown RBP5.82□□□□□ -1.48
UBR1-205ENST00000564540 DGKHQ86XP1 1220 aa5.82□□□□□ -1.48
UBR1-205ENST00000564540 CTHRC1Q96CG8 243 aa5.82□□□□□ -1.48
UBR1-205ENST00000564540 SNX22Q96L94 193 aa5.82□□□□□ -1.48
UBR1-205ENST00000564540 C5orf34Q96MH7 638 aa5.82□□□□□ -1.48
UBR1-205ENST00000564540 INO80BQ9C086 356 aaPredicted RBP5.82□□□□□ -1.48
UBR1-205ENST00000564540 TBC1D23Q9NUY8 699 aa5.82□□□□□ -1.48
UBR1-205ENST00000564540 ASIC5Q9NY37 505 aa5.82□□□□□ -1.48
UBR1-205ENST00000564540 RNF7Q9UBF6 113 aa5.82□□□□□ -1.48
UBR1-205ENST00000564540 DKK4Q9UBT3 224 aa5.82□□□□□ -1.48
UBR1-205ENST00000564540 SNX13Q9Y5W8 968 aa5.82□□□□□ -1.48
UBR1-205ENST00000564540 POC1B-GALNT4F8VUJ3 575 aa5.81□□□□□ -1.48
UBR1-205ENST00000564540 INO80B-WBP1J3KQ70 363 aa5.81□□□□□ -1.48
UBR1-205ENST00000564540 EXOC5O00471 708 aa5.81□□□□□ -1.48
UBR1-205ENST00000564540 ADAMTS3O15072 1205 aa5.81□□□□□ -1.48
UBR1-205ENST00000564540 IL1R2P27930 398 aa5.81□□□□□ -1.48
UBR1-205ENST00000564540 DIO1P49895 249 aa5.81□□□□□ -1.48
UBR1-205ENST00000564540 HTRA4P83105 476 aaPredicted RBP5.81□□□□□ -1.48
UBR1-205ENST00000564540 LMAN2Q12907 356 aa5.81□□□□□ -1.48
UBR1-205ENST00000564540 ZNF626Q68DY1 528 aa5.81□□□□□ -1.48
UBR1-205ENST00000564540 CATSPERGQ6ZRH7 1159 aa5.81□□□□□ -1.48
UBR1-205ENST00000564540 PTCHD4Q6ZW05 846 aa5.81□□□□□ -1.48
UBR1-205ENST00000564540 RAB11FIP4Q86YS3 637 aa5.81□□□□□ -1.48
UBR1-205ENST00000564540 SFTPA1Q8IWL2 248 aa5.81□□□□□ -1.48
UBR1-205ENST00000564540 GALNT4Q8N4A0 578 aa5.81□□□□□ -1.48
UBR1-205ENST00000564540 METTL25Q8N6Q8 603 aa5.81□□□□□ -1.48
UBR1-205ENST00000564540 C11orf44Q8N8P7 122 aa5.81□□□□□ -1.48
UBR1-205ENST00000564540 ZNF778Q96MU6 729 aa5.81□□□□□ -1.48
UBR1-205ENST00000564540 BTBD1Q9H0C5 482 aa5.81□□□□□ -1.48
UBR1-205ENST00000564540 NUP62CLQ9H1M0 184 aa5.81□□□□□ -1.48
UBR1-205ENST00000564540 DDX21Q9NR30 783 aaKnown RBP eCLIP5.81□□□□□ -1.48
UBR1-205ENST00000564540 RIMKLBQ9ULI2 386 aa5.81□□□□□ -1.48
UBR1-205ENST00000564540 AQP7P3A6NL99 342 aa5.8□□□□□ -1.48
UBR1-205ENST00000564540 PPP6CO00743 305 aa5.8□□□□□ -1.48
UBR1-205ENST00000564540 PQBP1O60828 265 aaKnown RBP5.8□□□□□ -1.48
UBR1-205ENST00000564540 CREB1P16220 341 aa5.8□□□□□ -1.48
UBR1-205ENST00000564540 KELP23276 732 aa5.8□□□□□ -1.48
UBR1-205ENST00000564540 CERS1P27544 350 aa5.8□□□□□ -1.48
UBR1-205ENST00000564540 ZNF81P51508 661 aa5.8□□□□□ -1.48
UBR1-205ENST00000564540 COPB1P53618 953 aaKnown RBP5.8□□□□□ -1.48
UBR1-205ENST00000564540 KRTAP10-9P60411 292 aa5.8□□□□□ -1.48
UBR1-205ENST00000564540 SLC18B1Q6NT16 456 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms