RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 DUSP16Q9BY84 665 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 ATXN3LQ9H3M9 355 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 PNPLA8Q9NP80 782 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 TAB2Q9NYJ8 693 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 UXTQ9UBK9 157 aaPredicted RBP6.55□□□□□ -1.36
CNOT1-204ENST00000563130 ZMYM5Q9UJ78 669 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 KIAA1257Q9ULG3 409 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 NUMBLQ9Y6R0 609 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 NCANO14594 1321 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 MYO10Q9HD67 2058 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 BECN2A8MW95 431 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 O00370 1275 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 ECI2O75521 394 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 CAVIN2O95810 425 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 FAM200BP0CF97 657 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 VDRP11473 427 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 ATP1A3P13637 1013 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 ALADP13716 330 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 NPR3P17342 541 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 ANXA13P27216 316 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 ADORA2BP29275 332 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 COPB1P53618 953 aaKnown RBP6.55□□□□□ -1.36
CNOT1-204ENST00000563130 TDGQ13569 410 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 TAF12Q16514 161 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 PKDCCQ504Y2 493 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 FAM78AQ5JUQ0 283 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 GJB7Q6PEY0 223 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 MTSS1LQ765P7 747 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 TTC30AQ86WT1 665 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 NUP93Q8N1F7 819 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 SLC44A3Q8N4M1 653 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 ANKRD52Q8NB46 1076 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 RSAD2Q8WXG1 361 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 TFAP2BQ92481 460 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 SHC3Q92529 594 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 SMARCD2Q92925 531 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 MED10Q9BTT4 135 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 SLC46A2Q9BY10 475 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 UBXN6Q9BZV1 441 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 DNAI2Q9GZS0 605 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 TASP1Q9H6P5 420 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 UBE2TQ9NPD8 197 aaPredicted RBP6.55□□□□□ -1.36
CNOT1-204ENST00000563130 COMMD8Q9NX08 183 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 EHD2Q9NZN4 543 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 AJAP1Q9UKB5 411 aaPredicted RBP6.55□□□□□ -1.36
CNOT1-204ENST00000563130 MAGED2Q9UNF1 606 aaPredicted RBP6.55□□□□□ -1.36
CNOT1-204ENST00000563130 SMTNL1A8MU46 457 aa6.54□□□□□ -1.36
CNOT1-204ENST00000563130 ZDHHC11BP0C7U3 371 aa6.54□□□□□ -1.36
CNOT1-204ENST00000563130 DDX6P26196 483 aaKnown RBP eCLIP6.54□□□□□ -1.369e-6■□□□□ 10.1
CNOT1-204ENST00000563130 PPP3CCP48454 512 aa6.54□□□□□ -1.36
CNOT1-204ENST00000563130 SLC5A3P53794 718 aa6.54□□□□□ -1.36
CNOT1-204ENST00000563130 MFAP3P55082 362 aa6.54□□□□□ -1.36
CNOT1-204ENST00000563130 MAP3K7CLP57077 242 aa6.54□□□□□ -1.36
CNOT1-204ENST00000563130 ZXDAP98168 799 aa6.54□□□□□ -1.36
CNOT1-204ENST00000563130 CYP4F8P98187 520 aa6.54□□□□□ -1.36
CNOT1-204ENST00000563130 SGO2Q562F6 1265 aa6.54□□□□□ -1.36
CNOT1-204ENST00000563130 KLHDC7AQ5VTJ3 777 aa6.54□□□□□ -1.36
CNOT1-204ENST00000563130 SNX30Q5VWJ9 437 aa6.54□□□□□ -1.36
CNOT1-204ENST00000563130 LCLAT1Q6UWP7 414 aa6.54□□□□□ -1.36
CNOT1-204ENST00000563130 MON1AQ86VX9 555 aa6.54□□□□□ -1.36
CNOT1-204ENST00000563130 RBBP8NLQ8NC74 664 aaPredicted RBP6.54□□□□□ -1.36
CNOT1-204ENST00000563130 ARMC2Q8NEN0 867 aa6.54□□□□□ -1.36
CNOT1-204ENST00000563130 SCAMP5Q8TAC9 235 aa6.54□□□□□ -1.36
CNOT1-204ENST00000563130 ZSCAN18Q8TBC5 510 aaPredicted RBP6.54□□□□□ -1.36
CNOT1-204ENST00000563130 EDAQ92838 391 aa6.54□□□□□ -1.36
CNOT1-204ENST00000563130 ELSPBP1Q96BH3 223 aa6.54□□□□□ -1.36
CNOT1-204ENST00000563130 NAA15Q9BXJ9 866 aaKnown RBP6.54□□□□□ -1.36
CNOT1-204ENST00000563130 IRX2Q9BZI1 471 aaPredicted RBP6.54□□□□□ -1.36
CNOT1-204ENST00000563130 VPS16Q9H269 839 aa6.54□□□□□ -1.36
CNOT1-204ENST00000563130 EPHX3Q9H6B9 360 aa6.54□□□□□ -1.36
CNOT1-204ENST00000563130 PLCB1Q9NQ66 1216 aa6.54□□□□□ -1.36
CNOT1-204ENST00000563130 MAP10Q9P2G4 905 aa6.54□□□□□ -1.36
CNOT1-204ENST00000563130 TSPAN16Q9UKR8 245 aa6.54□□□□□ -1.36
CNOT1-204ENST00000563130 DUSP12Q9UNI6 340 aa6.54□□□□□ -1.36
CNOT1-204ENST00000563130 SIK3Q9Y2K2 1263 aa6.54□□□□□ -1.36
CNOT1-204ENST00000563130 PCDHB4Q9Y5E5 795 aa6.54□□□□□ -1.36
CNOT1-204ENST00000563130 USP3Q9Y6I4 520 aa6.54□□□□□ -1.36
CNOT1-204ENST00000563130 ZNF840PA6NDX5 716 aa6.53□□□□□ -1.36
CNOT1-204ENST00000563130 LGALS16A8MUM7 142 aa6.53□□□□□ -1.36
CNOT1-204ENST00000563130 RTN3O95197 1032 aaPredicted RBP6.53□□□□□ -1.36
CNOT1-204ENST00000563130 OLFM2O95897 454 aa6.53□□□□□ -1.36
CNOT1-204ENST00000563130 UCHL3P15374 230 aa6.53□□□□□ -1.36
CNOT1-204ENST00000563130 PFKLP17858 780 aa6.53□□□□□ -1.36
CNOT1-204ENST00000563130 RFX1P22670 979 aa6.53□□□□□ -1.36
CNOT1-204ENST00000563130 YWHAQP27348 245 aa6.53□□□□□ -1.36
CNOT1-204ENST00000563130 KIF11P52732 1056 aa6.53□□□□□ -1.36
CNOT1-204ENST00000563130 TAF10Q12962 218 aa6.53□□□□□ -1.36
CNOT1-204ENST00000563130 CNGA2Q16280 664 aa6.53□□□□□ -1.36
CNOT1-204ENST00000563130 ARHGAP15Q53QZ3 475 aa6.53□□□□□ -1.36
CNOT1-204ENST00000563130 RAB41Q5JT25 222 aa6.53□□□□□ -1.36
CNOT1-204ENST00000563130 GPR158Q5T848 1215 aa6.53□□□□□ -1.36
CNOT1-204ENST00000563130 TXNDC8Q6A555 127 aa6.53□□□□□ -1.36
CNOT1-204ENST00000563130 TANGO2Q6ICL3 276 aa6.53□□□□□ -1.36
CNOT1-204ENST00000563130 GPRIN1Q7Z2K8 1008 aa6.53□□□□□ -1.36
CNOT1-204ENST00000563130 PIGZQ86VD9 579 aa6.53□□□□□ -1.36
CNOT1-204ENST00000563130 ARID3BQ8IVW6 561 aaPredicted RBP6.53□□□□□ -1.36
CNOT1-204ENST00000563130 UBALD2Q8IYN6 164 aa6.53□□□□□ -1.36
CNOT1-204ENST00000563130 CMTM8Q8IZV2 173 aa6.53□□□□□ -1.36
CNOT1-204ENST00000563130 ST13P5Q8NFI4 369 aaPredicted RBP6.53□□□□□ -1.36
CNOT1-204ENST00000563130 OVCA2Q8WZ82 227 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms