RNA–Protein interactions for RNA: ENST00000562775.1

SPG7-206, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best)

Gene SPG7, Length 1,595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-206ENST00000562775 FIBCD1Q8N539 461 aa14.73□□□□□ -0.05
SPG7-206ENST00000562775 ARFGAP1Q8N6T3 406 aa14.73□□□□□ -0.05
SPG7-206ENST00000562775 PHOSPHO2Q8TCD6 241 aa14.73□□□□□ -0.05
SPG7-206ENST00000562775 SPPL2BQ8TCT7 592 aa14.73□□□□□ -0.05
SPG7-206ENST00000562775 RIN2Q8WYP3 895 aaPredicted RBP14.73□□□□□ -0.05
SPG7-206ENST00000562775 SLC9A7Q96T83 725 aa14.73□□□□□ -0.05
SPG7-206ENST00000562775 NAP1L3Q99457 506 aaPredicted RBP14.73□□□□□ -0.05
SPG7-206ENST00000562775 NCAPGQ9BPX3 1015 aa14.73□□□□□ -0.05
SPG7-206ENST00000562775 LBHD1Q9BQE6 289 aaPredicted RBP14.73□□□□□ -0.05
SPG7-206ENST00000562775 ZBED2Q9BTP6 218 aa14.73□□□□□ -0.05
SPG7-206ENST00000562775 DDX23Q9BUQ8 820 aaKnown RBP14.73□□□□□ -0.05
SPG7-206ENST00000562775 MTRRQ9UBK8 725 aa14.73□□□□□ -0.05
SPG7-206ENST00000562775 INSL6Q9Y581 213 aa14.73□□□□□ -0.05
SPG7-206ENST00000562775 SLC4A7Q9Y6M7 1214 aa14.73□□□□□ -0.05
SPG7-206ENST00000562775 ZBED1O96006 694 aa14.72□□□□□ -0.05
SPG7-206ENST00000562775 TCF4P15884 667 aa14.72□□□□□ -0.05
SPG7-206ENST00000562775 ARPP19P56211 112 aa14.72□□□□□ -0.05
SPG7-206ENST00000562775 PSMD5Q16401 504 aa14.72□□□□□ -0.05
SPG7-206ENST00000562775 TEX35Q5T0J7 233 aa14.72□□□□□ -0.05
SPG7-206ENST00000562775 PM20D1Q6GTS8 502 aa14.72□□□□□ -0.05
SPG7-206ENST00000562775 SLC8B1Q6J4K2 584 aa14.72□□□□□ -0.05
SPG7-206ENST00000562775 PRSS55Q6UWB4 352 aaPredicted RBP14.72□□□□□ -0.05
SPG7-206ENST00000562775 RSPO2Q6UXX9 243 aaPredicted RBP14.72□□□□□ -0.05
SPG7-206ENST00000562775 DDX53Q86TM3 631 aaKnown RBP14.72□□□□□ -0.05
SPG7-206ENST00000562775 FBXO22Q8NEZ5 403 aa14.72□□□□□ -0.05
SPG7-206ENST00000562775 C2orf15Q8WU43 125 aaKnown RBP14.72□□□□□ -0.05
SPG7-206ENST00000562775 IRGQQ8WZA9 623 aa14.72□□□□□ -0.05
SPG7-206ENST00000562775 FAM149B1Q96BN6 582 aa14.72□□□□□ -0.05
SPG7-206ENST00000562775 C8orf48Q96LL4 319 aa14.72□□□□□ -0.05
SPG7-206ENST00000562775 HERC2P3Q9BVR0 1158 aa14.72□□□□□ -0.05
SPG7-206ENST00000562775 MTIF3Q9H2K0 278 aaKnown RBP14.72□□□□□ -0.05
SPG7-206ENST00000562775 DDX56Q9NY93 547 aaKnown RBP14.72□□□□□ -0.05
SPG7-206ENST00000562775 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.72□□□□□ -0.05
SPG7-206ENST00000562775 ZMYND8Q9ULU4 1186 aaPredicted RBP14.72□□□□□ -0.05
SPG7-206ENST00000562775 PCDHB12Q9Y5F1 795 aa14.72□□□□□ -0.05
SPG7-206ENST00000562775 USP3Q9Y6I4 520 aa14.72□□□□□ -0.05
SPG7-206ENST00000562775 MTMR11A4FU01 709 aa14.71□□□□□ -0.05
SPG7-206ENST00000562775 TRIM66O15016 1216 aa14.71□□□□□ -0.05
SPG7-206ENST00000562775 DAB1O75553 588 aa14.71□□□□□ -0.05
SPG7-206ENST00000562775 ZRANB2O95218 330 aaKnown RBP eCLIP14.71□□□□□ -0.054e-6■■■■■ 39.6
SPG7-206ENST00000562775 FGGP02679 453 aa14.71□□□□□ -0.05
SPG7-206ENST00000562775 KRT7P08729 469 aa14.71□□□□□ -0.05
SPG7-206ENST00000562775 MATKP42679 507 aa14.71□□□□□ -0.05
SPG7-206ENST00000562775 GLUD2P49448 558 aa14.71□□□□□ -0.05
SPG7-206ENST00000562775 DSG1Q02413 1049 aa14.71□□□□□ -0.05
SPG7-206ENST00000562775 SLC25A11Q02978 314 aaKnown RBP14.71□□□□□ -0.05
SPG7-206ENST00000562775 LONRF2Q1L5Z9 754 aa14.71□□□□□ -0.05
SPG7-206ENST00000562775 ERCC6LQ2NKX8 1250 aa14.71□□□□□ -0.05
SPG7-206ENST00000562775 C15orf59Q2T9L4 293 aaPredicted RBP14.71□□□□□ -0.05
SPG7-206ENST00000562775 HERC6Q8IVU3 1022 aa14.71□□□□□ -0.05
SPG7-206ENST00000562775 SCN4BQ8IWT1 228 aa14.71□□□□□ -0.05
SPG7-206ENST00000562775 ATAD1Q8NBU5 361 aa14.71□□□□□ -0.05
SPG7-206ENST00000562775 EXD1Q8NHP7 514 aa14.71□□□□□ -0.05
SPG7-206ENST00000562775 NDRG1Q92597 394 aaKnown RBP14.71□□□□□ -0.05
SPG7-206ENST00000562775 CFAP57Q96MR6 1250 aa14.71□□□□□ -0.05
SPG7-206ENST00000562775 PGLYRP2Q96PD5 576 aa14.71□□□□□ -0.05
SPG7-206ENST00000562775 RAD9AQ99638 391 aa14.71□□□□□ -0.05
SPG7-206ENST00000562775 C11orf84Q9BUA3 381 aaPredicted RBP14.71□□□□□ -0.05
SPG7-206ENST00000562775 POPDC2Q9HBU9 364 aa14.71□□□□□ -0.05
SPG7-206ENST00000562775 STK39Q9UEW8 545 aa14.71□□□□□ -0.05
SPG7-206ENST00000562775 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.71□□□□□ -0.05
SPG7-206ENST00000562775 CDY1Q9Y6F8 540 aa14.71□□□□□ -0.05
SPG7-206ENST00000562775 V9GYY5 206 aaPredicted RBP14.71□□□□□ -0.05
SPG7-206ENST00000562775 PATJQ8NI35 1801 aa14.7□□□□□ -0.06
SPG7-206ENST00000562775 TNFRSF10BO14763 440 aa14.7□□□□□ -0.06
SPG7-206ENST00000562775 USP17L7P0C7H9 530 aa14.7□□□□□ -0.06
SPG7-206ENST00000562775 MIPP30301 263 aa14.7□□□□□ -0.06
SPG7-206ENST00000562775 NOS2P35228 1153 aa14.7□□□□□ -0.06
SPG7-206ENST00000562775 GJC1P36383 396 aa14.7□□□□□ -0.06
SPG7-206ENST00000562775 ATP11AP98196 1134 aa14.7□□□□□ -0.06
SPG7-206ENST00000562775 C2orf54Q08AI8 447 aa14.7□□□□□ -0.06
SPG7-206ENST00000562775 CDO1Q16878 200 aa14.7□□□□□ -0.06
SPG7-206ENST00000562775 SH3PXD2AQ5TCZ1 1133 aa14.7□□□□□ -0.06
SPG7-206ENST00000562775 AADACL2Q6P093 401 aa14.7□□□□□ -0.06
SPG7-206ENST00000562775 GPR65Q8IYL9 337 aa14.7□□□□□ -0.06
SPG7-206ENST00000562775 RCOR2Q8IZ40 523 aa14.7□□□□□ -0.06
SPG7-206ENST00000562775 DEFB106AQ8N104 65 aa14.7□□□□□ -0.06
SPG7-206ENST00000562775 MMGT1Q8N4V1 131 aa14.7□□□□□ -0.06
SPG7-206ENST00000562775 NOA1Q8NC60 698 aaKnown RBP14.7□□□□□ -0.06
SPG7-206ENST00000562775 FAM172AQ8WUF8 416 aa14.7□□□□□ -0.06
SPG7-206ENST00000562775 CENPIQ92674 756 aaPredicted RBP14.7□□□□□ -0.06
SPG7-206ENST00000562775 CLP1Q92989 425 aaKnown RBP14.7□□□□□ -0.06
SPG7-206ENST00000562775 RBM41Q96IZ5 413 aaKnown RBP14.7□□□□□ -0.06
SPG7-206ENST00000562775 SLC2A13Q96QE2 648 aa14.7□□□□□ -0.06
SPG7-206ENST00000562775 NGRNQ9NPE2 291 aaKnown RBP14.7□□□□□ -0.06
SPG7-206ENST00000562775 USP18Q9UMW8 372 aa14.7□□□□□ -0.06
SPG7-206ENST00000562775 KIAA1671Q9BY89 1806 aa14.69□□□□□ -0.06
SPG7-206ENST00000562775 YJEFN3A6XGL0 299 aa14.69□□□□□ -0.06
SPG7-206ENST00000562775 E7ENQ6 273 aa14.69□□□□□ -0.06
SPG7-206ENST00000562775 CCDC188H7C350 402 aa14.69□□□□□ -0.06
SPG7-206ENST00000562775 KRIT1O00522 736 aa14.69□□□□□ -0.06
SPG7-206ENST00000562775 TRUB2O95900 331 aaKnown RBP14.69□□□□□ -0.06
SPG7-206ENST00000562775 LTFP02788 710 aa14.69□□□□□ -0.06
SPG7-206ENST00000562775 LINC00271P0C7V0 271 aa14.69□□□□□ -0.06
SPG7-206ENST00000562775 OR1D2P34982 312 aa14.69□□□□□ -0.06
SPG7-206ENST00000562775 CETN2P41208 172 aa14.69□□□□□ -0.06
SPG7-206ENST00000562775 SLC5A3P53794 718 aa14.69□□□□□ -0.06
SPG7-206ENST00000562775 ROR1Q01973 937 aa14.69□□□□□ -0.06
SPG7-206ENST00000562775 KRT17Q04695 432 aa14.69□□□□□ -0.06
SPG7-206ENST00000562775 NAA30Q147X3 362 aaPredicted RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms