RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 PDZD8Q8NEN9 1154 aa16.24■□□□□ 0.19
CCNDBP1-203ENST00000562553 PJA1Q8NG27 643 aa16.24■□□□□ 0.19
CCNDBP1-203ENST00000562553 ENOX1Q8TC92 643 aaKnown RBP16.24■□□□□ 0.19
CCNDBP1-203ENST00000562553 SH3RF2Q8TEC5 729 aa16.24■□□□□ 0.19
CCNDBP1-203ENST00000562553 OVCA2Q8WZ82 227 aa16.24■□□□□ 0.19
CCNDBP1-203ENST00000562553 TFAP2BQ92481 460 aa16.24■□□□□ 0.19
CCNDBP1-203ENST00000562553 SHDQ96IW2 340 aa16.24■□□□□ 0.19
CCNDBP1-203ENST00000562553 ZSWIM1Q9BR11 485 aa16.24■□□□□ 0.19
CCNDBP1-203ENST00000562553 PNPLA8Q9NP80 782 aa16.24■□□□□ 0.19
CCNDBP1-203ENST00000562553 LTB4R2Q9NPC1 389 aa16.24■□□□□ 0.19
CCNDBP1-203ENST00000562553 GKN1Q9NS71 199 aa16.24■□□□□ 0.19
CCNDBP1-203ENST00000562553 GTSE1Q9NYZ3 720 aa16.24■□□□□ 0.19
CCNDBP1-203ENST00000562553 TSPAN16Q9UKR8 245 aa16.24■□□□□ 0.19
CCNDBP1-203ENST00000562553 ARHGAP26Q9UNA1 814 aa16.24■□□□□ 0.19
CCNDBP1-203ENST00000562553 PIAS3Q9Y6X2 628 aa16.24■□□□□ 0.19
CCNDBP1-203ENST00000562553 MYO15AQ9UKN7 3530 aa16.24■□□□□ 0.19
CCNDBP1-203ENST00000562553 ZFHX2Q9C0A1 2572 aaPredicted RBP16.23■□□□□ 0.19
CCNDBP1-203ENST00000562553 KCNJ18B7U540 433 aa16.23■□□□□ 0.19
CCNDBP1-203ENST00000562553 O00370 1275 aa16.23■□□□□ 0.19
CCNDBP1-203ENST00000562553 DCNP07585 359 aaKnown RBP16.23■□□□□ 0.19
CCNDBP1-203ENST00000562553 VDRP11473 427 aa16.23■□□□□ 0.19
CCNDBP1-203ENST00000562553 PRKCSHP14314 528 aaPredicted RBP16.23■□□□□ 0.19
CCNDBP1-203ENST00000562553 GLULP15104 373 aa16.23■□□□□ 0.19
CCNDBP1-203ENST00000562553 PFKLP17858 780 aa16.23■□□□□ 0.19
CCNDBP1-203ENST00000562553 BRD2P25440 801 aaKnown RBP16.23■□□□□ 0.19
CCNDBP1-203ENST00000562553 TARSP26639 723 aaKnown RBP16.23■□□□□ 0.19
CCNDBP1-203ENST00000562553 KIF11P52732 1056 aa16.23■□□□□ 0.19
CCNDBP1-203ENST00000562553 ZNF132P52740 706 aa16.23■□□□□ 0.19
CCNDBP1-203ENST00000562553 SLC7A9P82251 487 aa16.23■□□□□ 0.19
CCNDBP1-203ENST00000562553 KCNJ12Q14500 433 aa16.23■□□□□ 0.19
CCNDBP1-203ENST00000562553 MTF1Q14872 753 aa16.23■□□□□ 0.19
CCNDBP1-203ENST00000562553 UBXN2BQ14CS0 331 aa16.23■□□□□ 0.19
CCNDBP1-203ENST00000562553 STX1AQ16623 288 aa16.23■□□□□ 0.19
CCNDBP1-203ENST00000562553 GBP6Q6ZN66 633 aa16.23■□□□□ 0.19
CCNDBP1-203ENST00000562553 CCDC105Q8IYK2 499 aa16.23■□□□□ 0.19
CCNDBP1-203ENST00000562553 ANKRD52Q8NB46 1076 aa16.23■□□□□ 0.19
CCNDBP1-203ENST00000562553 CSGALNACT1Q8TDX6 532 aa16.23■□□□□ 0.19
CCNDBP1-203ENST00000562553 FAM83CQ9BQN1 747 aa16.23■□□□□ 0.19
CCNDBP1-203ENST00000562553 TUBGCP2Q9BSJ2 902 aa16.23■□□□□ 0.19
CCNDBP1-203ENST00000562553 FBXO44Q9H4M3 255 aa16.23■□□□□ 0.19
CCNDBP1-203ENST00000562553 CCSER2Q9H7U1 834 aa16.23■□□□□ 0.19
CCNDBP1-203ENST00000562553 UBE2TQ9NPD8 197 aaPredicted RBP16.23■□□□□ 0.19
CCNDBP1-203ENST00000562553 HPS4Q9NQG7 708 aa16.23■□□□□ 0.19
CCNDBP1-203ENST00000562553 FAM86C1Q9NVL1 165 aa16.23■□□□□ 0.19
CCNDBP1-203ENST00000562553 ANO10Q9NW15 660 aa16.23■□□□□ 0.19
CCNDBP1-203ENST00000562553 THG1LQ9NWX6 298 aaKnown RBP16.23■□□□□ 0.19
CCNDBP1-203ENST00000562553 OSER1Q9NX31 292 aa16.23■□□□□ 0.19
CCNDBP1-203ENST00000562553 SMPD4Q9NXE4 827 aa16.23■□□□□ 0.19
CCNDBP1-203ENST00000562553 AJAP1Q9UKB5 411 aaPredicted RBP16.23■□□□□ 0.19
CCNDBP1-203ENST00000562553 CPQQ9Y646 472 aa16.23■□□□□ 0.19
CCNDBP1-203ENST00000562553 MYOFQ9NZM1 2061 aa16.23■□□□□ 0.19
CCNDBP1-203ENST00000562553 GTPBP10A4D1E9 387 aaKnown RBP16.22■□□□□ 0.19
CCNDBP1-203ENST00000562553 LEFTY2O00292 366 aa16.22■□□□□ 0.19
CCNDBP1-203ENST00000562553 COCHO43405 550 aa16.22■□□□□ 0.19
CCNDBP1-203ENST00000562553 PAEPP09466 180 aa16.22■□□□□ 0.19
CCNDBP1-203ENST00000562553 ARSAP15289 507 aa16.22■□□□□ 0.19
CCNDBP1-203ENST00000562553 TCF3P15923 654 aa16.22■□□□□ 0.19
CCNDBP1-203ENST00000562553 PON1P27169 355 aa16.22■□□□□ 0.19
CCNDBP1-203ENST00000562553 NBL1P41271 181 aa16.22■□□□□ 0.19
CCNDBP1-203ENST00000562553 PDE6CP51160 858 aa16.22■□□□□ 0.19
CCNDBP1-203ENST00000562553 BCAT1P54687 386 aa16.22■□□□□ 0.19
CCNDBP1-203ENST00000562553 PLCB2Q00722 1185 aa16.22■□□□□ 0.19
CCNDBP1-203ENST00000562553 PDE4CQ08493 712 aa16.22■□□□□ 0.19
CCNDBP1-203ENST00000562553 EXOC3L4Q17RC7 722 aa16.22■□□□□ 0.19
CCNDBP1-203ENST00000562553 VWA3BQ502W6 1294 aa16.22■□□□□ 0.19
CCNDBP1-203ENST00000562553 TCP11X2Q5H9J9 407 aa16.22■□□□□ 0.19
CCNDBP1-203ENST00000562553 SNX30Q5VWJ9 437 aa16.22■□□□□ 0.19
CCNDBP1-203ENST00000562553 CAVIN1Q6NZI2 390 aaKnown RBP16.22■□□□□ 0.19
CCNDBP1-203ENST00000562553 PIGZQ86VD9 579 aa16.22■□□□□ 0.19
CCNDBP1-203ENST00000562553 UBA3Q8TBC4 463 aa16.22■□□□□ 0.19
CCNDBP1-203ENST00000562553 NDST4Q9H3R1 872 aa16.22■□□□□ 0.19
CCNDBP1-203ENST00000562553 EBF3Q9H4W6 596 aa16.22■□□□□ 0.19
CCNDBP1-203ENST00000562553 NMUR1Q9HB89 426 aa16.22■□□□□ 0.19
CCNDBP1-203ENST00000562553 SIX2Q9NPC8 291 aa16.22■□□□□ 0.19
CCNDBP1-203ENST00000562553 TAB2Q9NYJ8 693 aa16.22■□□□□ 0.19
CCNDBP1-203ENST00000562553 DLGAP2Q9P1A6 1054 aa16.22■□□□□ 0.19
CCNDBP1-203ENST00000562553 SCML2Q9UQR0 700 aa16.22■□□□□ 0.19
CCNDBP1-203ENST00000562553 SIT1Q9Y3P8 196 aa16.22■□□□□ 0.19
CCNDBP1-203ENST00000562553 WNT6Q9Y6F9 365 aa16.22■□□□□ 0.19
CCNDBP1-203ENST00000562553 VPS13AQ96RL7 3174 aa16.22■□□□□ 0.19
CCNDBP1-203ENST00000562553 CACNA1IQ9P0X4 2223 aa16.22■□□□□ 0.19
CCNDBP1-203ENST00000562553 CFAP54Q96N23 3096 aa16.21■□□□□ 0.19
CCNDBP1-203ENST00000562553 A0A1W2PQH9 124 aa16.21■□□□□ 0.19
CCNDBP1-203ENST00000562553 OTOL1A6NHN0 477 aaPredicted RBP16.21■□□□□ 0.19
CCNDBP1-203ENST00000562553 FAM170BA6NMN3 283 aa16.21■□□□□ 0.19
CCNDBP1-203ENST00000562553 SCAMP3O14828 347 aaKnown RBP16.21■□□□□ 0.19
CCNDBP1-203ENST00000562553 GFRA3O60609 400 aa16.21■□□□□ 0.19
CCNDBP1-203ENST00000562553 MBL2P11226 248 aaPredicted RBP16.21■□□□□ 0.19
CCNDBP1-203ENST00000562553 KPNA1P52294 538 aaPredicted RBP16.21■□□□□ 0.19
CCNDBP1-203ENST00000562553 TYRO3Q06418 890 aa16.21■□□□□ 0.19
CCNDBP1-203ENST00000562553 BST2Q10589 180 aaKnown RBP16.21■□□□□ 0.19
CCNDBP1-203ENST00000562553 PKDCCQ504Y2 493 aa16.21■□□□□ 0.19
CCNDBP1-203ENST00000562553 HECTD3Q5T447 861 aa16.21■□□□□ 0.19
CCNDBP1-203ENST00000562553 CDKAL1Q5VV42 579 aa16.21■□□□□ 0.19
CCNDBP1-203ENST00000562553 TXNDC11Q6PKC3 985 aa16.21■□□□□ 0.19
CCNDBP1-203ENST00000562553 ZNF852Q6ZMS4 543 aa16.21■□□□□ 0.19
CCNDBP1-203ENST00000562553 ZNF687Q8N1G0 1237 aa16.21■□□□□ 0.19
CCNDBP1-203ENST00000562553 ZFRQ96KR1 1074 aaKnown RBP16.21■□□□□ 0.19
CCNDBP1-203ENST00000562553 HESX1Q9UBX0 185 aa16.21■□□□□ 0.19
CCNDBP1-203ENST00000562553 APEX2Q9UBZ4 518 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms