RNA–Protein interactions for RNA: ENST00000562219.1

BBS4-205, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-205ENST00000562219 ARHGEF4Q9NR80 690 aa10.93□□□□□ -0.66
BBS4-205ENST00000562219 TMEM30AQ9NV96 361 aa10.93□□□□□ -0.66
BBS4-205ENST00000562219 TBC1D14Q9P2M4 693 aa10.93□□□□□ -0.66
BBS4-205ENST00000562219 MBD1Q9UIS9 605 aaPredicted RBP10.93□□□□□ -0.66
BBS4-205ENST00000562219 NME7Q9Y5B8 376 aa10.93□□□□□ -0.66
BBS4-205ENST00000562219 MORC2Q9Y6X9 1032 aaPredicted RBP10.93□□□□□ -0.66
BBS4-205ENST00000562219 DMXL2Q8TDJ6 3036 aa10.93□□□□□ -0.66
BBS4-205ENST00000562219 ZFYVE26Q68DK2 2539 aa10.92□□□□□ -0.66
BBS4-205ENST00000562219 ATRXP46100 2492 aa10.92□□□□□ -0.66
BBS4-205ENST00000562219 TCRBV21S2A2A0A5A6 115 aa10.92□□□□□ -0.66
BBS4-205ENST00000562219 E2F8A0AVK6 867 aa10.92□□□□□ -0.66
BBS4-205ENST00000562219 ADAM23O75077 832 aa10.92□□□□□ -0.66
BBS4-205ENST00000562219 TOP3BO95985 862 aaKnown RBP10.92□□□□□ -0.66
BBS4-205ENST00000562219 DLATP10515 647 aaKnown RBP10.92□□□□□ -0.66
BBS4-205ENST00000562219 ENGP17813 658 aa10.92□□□□□ -0.66
BBS4-205ENST00000562219 PTPN1P18031 435 aaKnown RBP10.92□□□□□ -0.66
BBS4-205ENST00000562219 HOXD12P35452 270 aa10.92□□□□□ -0.66
BBS4-205ENST00000562219 TNFRSF4P43489 277 aa10.92□□□□□ -0.66
BBS4-205ENST00000562219 MAPK8P45983 427 aa10.92□□□□□ -0.66
BBS4-205ENST00000562219 CACNA2D1P54289 1103 aa10.92□□□□□ -0.66
BBS4-205ENST00000562219 TNNC1P63316 161 aa10.92□□□□□ -0.66
BBS4-205ENST00000562219 CEBPZQ03701 1054 aaKnown RBP10.92□□□□□ -0.66
BBS4-205ENST00000562219 IFRD2Q12894 506 aaPredicted RBP10.92□□□□□ -0.66
BBS4-205ENST00000562219 SNRNP35Q16560 246 aaKnown RBP10.92□□□□□ -0.66
BBS4-205ENST00000562219 PEAR1Q5VY43 1037 aaPredicted RBP10.92□□□□□ -0.66
BBS4-205ENST00000562219 LYSMD4Q5XG99 296 aa10.92□□□□□ -0.66
BBS4-205ENST00000562219 SLC23A3Q6PIS1 610 aa10.92□□□□□ -0.66
BBS4-205ENST00000562219 TRAPPC11Q7Z392 1133 aa10.92□□□□□ -0.66
BBS4-205ENST00000562219 FRMD1Q8N878 549 aa10.92□□□□□ -0.66
BBS4-205ENST00000562219 B3GALNT2Q8NCR0 500 aa10.92□□□□□ -0.66
BBS4-205ENST00000562219 GLIS3Q8NEA6 775 aa10.92□□□□□ -0.66
BBS4-205ENST00000562219 OR6B3Q8NGW1 331 aa10.92□□□□□ -0.66
BBS4-205ENST00000562219 KCNV2Q8TDN2 545 aa10.92□□□□□ -0.66
BBS4-205ENST00000562219 PANK2Q9BZ23 570 aa10.92□□□□□ -0.66
BBS4-205ENST00000562219 ZNF518BQ9C0D4 1074 aa10.92□□□□□ -0.66
BBS4-205ENST00000562219 DPEP3Q9H4B8 488 aa10.92□□□□□ -0.66
BBS4-205ENST00000562219 SLC32A1Q9H598 525 aa10.92□□□□□ -0.66
BBS4-205ENST00000562219 TMEM74BQ9NUR3 256 aa10.92□□□□□ -0.66
BBS4-205ENST00000562219 PILRBQ9UKJ0 227 aa10.92□□□□□ -0.66
BBS4-205ENST00000562219 ATXN2Q99700 1313 aaKnown RBP10.91□□□□□ -0.66
BBS4-205ENST00000562219 EIF3DO15371 548 aaKnown RBP eCLIP10.91□□□□□ -0.66
BBS4-205ENST00000562219 AP5Z1O43299 807 aa10.91□□□□□ -0.66
BBS4-205ENST00000562219 COCHO43405 550 aa10.91□□□□□ -0.66
BBS4-205ENST00000562219 RTN3O95197 1032 aaPredicted RBP10.91□□□□□ -0.66
BBS4-205ENST00000562219 CFIP05156 583 aa10.91□□□□□ -0.66
BBS4-205ENST00000562219 FAM163BP0C2L3 166 aa10.91□□□□□ -0.66
BBS4-205ENST00000562219 TNNI1P19237 187 aa10.91□□□□□ -0.66
BBS4-205ENST00000562219 YWHAQP27348 245 aa10.91□□□□□ -0.66
BBS4-205ENST00000562219 HOXD13P35453 343 aa10.91□□□□□ -0.66
BBS4-205ENST00000562219 TUBP50607 506 aa10.91□□□□□ -0.66
BBS4-205ENST00000562219 GAD2Q05329 585 aa10.91□□□□□ -0.66
BBS4-205ENST00000562219 WDR72Q3MJ13 1102 aa10.91□□□□□ -0.66
BBS4-205ENST00000562219 PREPLQ4J6C6 727 aaPredicted RBP10.91□□□□□ -0.66
BBS4-205ENST00000562219 LY6G5CQ5SRR4 150 aa10.91□□□□□ -0.66
BBS4-205ENST00000562219 EMC10Q5UCC4 262 aa10.91□□□□□ -0.66
BBS4-205ENST00000562219 FAM173BQ6P4H8 233 aa10.91□□□□□ -0.66
BBS4-205ENST00000562219 TRMT11Q7Z4G4 463 aaKnown RBP10.91□□□□□ -0.66
BBS4-205ENST00000562219 ETFBKMTQ8IXQ9 262 aa10.91□□□□□ -0.66
BBS4-205ENST00000562219 NUP93Q8N1F7 819 aa10.91□□□□□ -0.66
BBS4-205ENST00000562219 PGBD3Q8N328 593 aa10.91□□□□□ -0.66
BBS4-205ENST00000562219 PDILTQ8N807 584 aa10.91□□□□□ -0.66
BBS4-205ENST00000562219 ZCCHC14Q8WYQ9 949 aaKnown RBP10.91□□□□□ -0.66
BBS4-205ENST00000562219 OVCA2Q8WZ82 227 aa10.91□□□□□ -0.66
BBS4-205ENST00000562219 HPS3Q969F9 1004 aa10.91□□□□□ -0.66
BBS4-205ENST00000562219 FBXO32Q969P5 355 aa10.91□□□□□ -0.66
BBS4-205ENST00000562219 ZFRQ96KR1 1074 aaKnown RBP10.91□□□□□ -0.66
BBS4-205ENST00000562219 CGRRF1Q99675 332 aa10.91□□□□□ -0.66
BBS4-205ENST00000562219 DUSP9Q99956 384 aaKnown RBP10.91□□□□□ -0.66
BBS4-205ENST00000562219 TNMDQ9H2S6 317 aa10.91□□□□□ -0.66
BBS4-205ENST00000562219 ZDHHC4Q9NPG8 344 aa10.91□□□□□ -0.66
BBS4-205ENST00000562219 NEUROG3Q9Y4Z2 214 aa10.91□□□□□ -0.66
BBS4-205ENST00000562219 DSPP15924 2871 aaKnown RBP10.91□□□□□ -0.66
BBS4-205ENST00000562219 PTPRBP23467 1997 aa10.9□□□□□ -0.66
BBS4-205ENST00000562219 ATP8B3O60423 1300 aa10.9□□□□□ -0.66
BBS4-205ENST00000562219 UBE4BO95155 1302 aa10.9□□□□□ -0.66
BBS4-205ENST00000562219 TBC1D3BA6NDS4 549 aa10.9□□□□□ -0.66
BBS4-205ENST00000562219 A8MXQ7 604 aa10.9□□□□□ -0.66
BBS4-205ENST00000562219 UPK3BL1B0FP48 263 aa10.9□□□□□ -0.66
BBS4-205ENST00000562219 UPK3BL2E5RIL1 263 aa10.9□□□□□ -0.66
BBS4-205ENST00000562219 CLDN5O00501 218 aa10.9□□□□□ -0.66
BBS4-205ENST00000562219 HOXC11O43248 304 aaPredicted RBP10.9□□□□□ -0.66
BBS4-205ENST00000562219 TULP3O75386 442 aa10.9□□□□□ -0.66
BBS4-205ENST00000562219 STAU1O95793 577 aaKnown RBP10.9□□□□□ -0.66
BBS4-205ENST00000562219 CST3P01034 146 aaPredicted RBP10.9□□□□□ -0.66
BBS4-205ENST00000562219 ITPKAP23677 461 aa10.9□□□□□ -0.66
BBS4-205ENST00000562219 CYP24A1Q07973 514 aa10.9□□□□□ -0.66
BBS4-205ENST00000562219 SEMA3BQ13214 749 aa10.9□□□□□ -0.66
BBS4-205ENST00000562219 CUL4AQ13619 759 aa10.9□□□□□ -0.66
BBS4-205ENST00000562219 PSMD6Q15008 389 aa10.9□□□□□ -0.66
BBS4-205ENST00000562219 SLC39A14Q15043 492 aa10.9□□□□□ -0.66
BBS4-205ENST00000562219 HECTD3Q5T447 861 aa10.9□□□□□ -0.66
BBS4-205ENST00000562219 SNX30Q5VWJ9 437 aa10.9□□□□□ -0.66
BBS4-205ENST00000562219 BTBD8Q5XKL5 378 aa10.9□□□□□ -0.66
BBS4-205ENST00000562219 KIAA1211LQ6NV74 962 aa10.9□□□□□ -0.66
BBS4-205ENST00000562219 EPM2AIP1Q7L775 607 aaPredicted RBP10.9□□□□□ -0.66
BBS4-205ENST00000562219 RABEPKQ7Z6M1 372 aa10.9□□□□□ -0.66
BBS4-205ENST00000562219 PIP4P1Q86T03 277 aa10.9□□□□□ -0.66
BBS4-205ENST00000562219 ZNF513Q8N8E2 541 aaPredicted RBP10.9□□□□□ -0.66
BBS4-205ENST00000562219 CEP76Q8TAP6 659 aa10.9□□□□□ -0.66
BBS4-205ENST00000562219 CCDC127Q96BQ5 260 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms