RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 PUF60Q9UHX1 559 aaKnown RBP5.56□□□□□ -1.52
SPG11-220ENST00000559933 LUC7L2Q9Y383 392 aaKnown RBP5.56□□□□□ -1.52
SPG11-220ENST00000559933 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.56□□□□□ -1.52
SPG11-220ENST00000559933 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.56□□□□□ -1.52
SPG11-220ENST00000559933 SLC4A7Q9Y6M7 1214 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 ATG2AQ2TAZ0 1938 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 NLRC5Q86WI3 1866 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 PDE4DIPQ5VU43 2346 aa5.56□□□□□ -1.52
SPG11-220ENST00000559933 LINC01553A4QN01 128 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 EPOPA6NHQ4 379 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 TMCO5BA8MYB1 307 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 LINC01387J3KSC0 135 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 CLDN5O00501 218 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 ZNF263O14978 683 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 ADAM12O43184 909 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 XPOTO43592 962 aaKnown RBP5.55□□□□□ -1.52
SPG11-220ENST00000559933 CILPO75339 1184 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 TADA2AO75478 443 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 CA3P07451 260 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 MMEP08473 750 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 CCDC130P13994 396 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 CD19P15391 556 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 CHRNB2P17787 502 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 RPL17P18621 184 aaKnown RBP5.55□□□□□ -1.52
SPG11-220ENST00000559933 MPSTP25325 297 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 DNAJB1P25685 340 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 CTNNB1P35222 781 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 EIF4A3P38919 411 aaKnown RBP5.55□□□□□ -1.52
SPG11-220ENST00000559933 STAT1P42224 750 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 EIF1AXP47813 144 aaKnown RBP5.55□□□□□ -1.52
SPG11-220ENST00000559933 AARSP49588 968 aaKnown RBP eCLIP5.55□□□□□ -1.52
SPG11-220ENST00000559933 ZNF132P52740 706 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 CACNA2D1P54289 1103 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 RAD23BP54727 409 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 HTRA4P83105 476 aaPredicted RBP5.55□□□□□ -1.52
SPG11-220ENST00000559933 GCNT1Q02742 428 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 KLHL30Q0D2K2 578 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 MYO1EQ12965 1108 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 SETDB1Q15047 1291 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 SGSM1Q2NKQ1 1148 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 SV2CQ496J9 727 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 C2CD6Q53TS8 623 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 TDRD12Q587J7 1177 aaKnown RBP5.55□□□□□ -1.52
SPG11-220ENST00000559933 FIGNQ5HY92 759 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 RTP2Q5QGT7 225 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 XP32Q5T750 250 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 LLGL2Q6P1M3 1020 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 DENND1BQ6P3S1 775 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 FUT10Q6P4F1 479 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 KCNT2Q6UVM3 1135 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 RSPO2Q6UXX9 243 aaPredicted RBP5.55□□□□□ -1.52
SPG11-220ENST00000559933 IRF2BP2Q7Z5L9 587 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 PHLDB2Q86SQ0 1253 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 ACOT1Q86TX2 421 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 NT5DC4Q86YG4 428 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 GLYCTKQ8IVS8 523 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 LRRC8AQ8IWT6 810 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 FAM71AQ8IYT1 594 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 CMTR2Q8IYT2 770 aaKnown RBP5.55□□□□□ -1.52
SPG11-220ENST00000559933 SLC39A11Q8N1S5 342 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 TTC9BQ8N6N2 239 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 C12orf29Q8N999 325 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 SLC4A11Q8NBS3 891 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 CCDC150Q8NCX0 1101 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 ACRBPQ8NEB7 543 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 OR10T2Q8NGX3 314 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 RSPH1Q8WYR4 309 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 SLC9A7Q96T83 725 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 PCDHB18PQ96TA0 734 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 GDF15Q99988 308 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 MRPL9Q9BYD2 267 aaKnown RBP5.55□□□□□ -1.52
SPG11-220ENST00000559933 PBX4Q9BYU1 374 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 NKX2-4Q9H2Z4 354 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 HAUS4Q9H6D7 363 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 SEPT11Q9NVA2 429 aaKnown RBP5.55□□□□□ -1.52
SPG11-220ENST00000559933 TMLHEQ9NVH6 421 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 TAS2R14Q9NYV8 317 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 IMPACTQ9P2X3 320 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 TJP2Q9UDY2 1190 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 CHORDC1Q9UHD1 332 aaPredicted RBP5.55□□□□□ -1.52
SPG11-220ENST00000559933 NOCTQ9UK39 431 aaKnown RBP5.55□□□□□ -1.52
SPG11-220ENST00000559933 ADAM28Q9UKQ2 775 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 FAN1Q9Y2M0 1017 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 REXO2Q9Y3B8 237 aaKnown RBP5.55□□□□□ -1.52
SPG11-220ENST00000559933 R3HCC1Q9Y3T6 440 aaKnown RBP5.55□□□□□ -1.52
SPG11-220ENST00000559933 NR2E3Q9Y5X4 410 aa5.55□□□□□ -1.52
SPG11-220ENST00000559933 USP27XA6NNY8 438 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 A8MXQ7 604 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 F8W735 103 aaPredicted RBP5.54□□□□□ -1.52
SPG11-220ENST00000559933 TMEM189-UBE2V1I3L0A0 370 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 M0QZQ0 153 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 RFXAPO00287 272 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 TULP2O00295 520 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 DDX3XO00571 662 aaKnown RBP eCLIP5.54□□□□□ -1.52
SPG11-220ENST00000559933 THAP12O43422 761 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 HUS1O60921 280 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 EFCAB14O75071 495 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 SOAT2O75908 522 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 GJB6O95452 261 aa5.54□□□□□ -1.52
SPG11-220ENST00000559933 ABL1P00519 1130 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 1165.3 ms