RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-204ENST00000559849 CCL26Q9Y258 94 aa14.42□□□□□ -0.1
CHRNB4-204ENST00000559849 PATJQ8NI35 1801 aa14.42□□□□□ -0.1
CHRNB4-204ENST00000559849 XPO1O14980 1071 aaKnown RBP14.42□□□□□ -0.1
CHRNB4-204ENST00000559849 ZDHHC11BP0C7U3 371 aa14.42□□□□□ -0.1
CHRNB4-204ENST00000559849 PDE4CQ08493 712 aa14.42□□□□□ -0.1
CHRNB4-204ENST00000559849 ARHGAP29Q52LW3 1261 aa14.42□□□□□ -0.1
CHRNB4-204ENST00000559849 SLC44A4Q53GD3 710 aa14.42□□□□□ -0.1
CHRNB4-204ENST00000559849 GPRIN1Q7Z2K8 1008 aa14.42□□□□□ -0.1
CHRNB4-204ENST00000559849 SHC3Q92529 594 aa14.42□□□□□ -0.1
CHRNB4-204ENST00000559849 DNASE1L2Q92874 299 aa14.42□□□□□ -0.1
CHRNB4-204ENST00000559849 MFSD1Q9H3U5 465 aa14.42□□□□□ -0.1
CHRNB4-204ENST00000559849 CA14Q9ULX7 337 aa14.42□□□□□ -0.1
CHRNB4-204ENST00000559849 USP3Q9Y6I4 520 aa14.42□□□□□ -0.1
CHRNB4-204ENST00000559849 KRBA1A5PL33 1030 aa14.41□□□□□ -0.1
CHRNB4-204ENST00000559849 BECN2A8MW95 431 aa14.41□□□□□ -0.1
CHRNB4-204ENST00000559849 OAS1P00973 400 aaKnown RBP14.41□□□□□ -0.1
CHRNB4-204ENST00000559849 SETSIPP0DME0 302 aa14.41□□□□□ -0.1
CHRNB4-204ENST00000559849 COPB1P53618 953 aaKnown RBP14.41□□□□□ -0.1
CHRNB4-204ENST00000559849 PLCB2Q00722 1185 aa14.41□□□□□ -0.1
CHRNB4-204ENST00000559849 GSE1Q14687 1217 aa14.41□□□□□ -0.1
CHRNB4-204ENST00000559849 PKDCCQ504Y2 493 aa14.41□□□□□ -0.1
CHRNB4-204ENST00000559849 RAB41Q5JT25 222 aa14.41□□□□□ -0.1
CHRNB4-204ENST00000559849 HECTD3Q5T447 861 aa14.41□□□□□ -0.1
CHRNB4-204ENST00000559849 DPY19L2P1Q6NXN4 242 aa14.41□□□□□ -0.1
CHRNB4-204ENST00000559849 DHX40Q8IX18 779 aaKnown RBP14.41□□□□□ -0.1
CHRNB4-204ENST00000559849 FBXL6Q8N531 539 aa14.41□□□□□ -0.1
CHRNB4-204ENST00000559849 UBA3Q8TBC4 463 aa14.41□□□□□ -0.1
CHRNB4-204ENST00000559849 SHDQ96IW2 340 aa14.41□□□□□ -0.1
CHRNB4-204ENST00000559849 ZSWIM1Q9BR11 485 aa14.41□□□□□ -0.1
CHRNB4-204ENST00000559849 RNF38Q9H0F5 515 aa14.41□□□□□ -0.1
CHRNB4-204ENST00000559849 ARHGEF3Q9NR81 526 aa14.41□□□□□ -0.1
CHRNB4-204ENST00000559849 GMIPQ9P107 970 aa14.41□□□□□ -0.1
CHRNB4-204ENST00000559849 ARHGAP26Q9UNA1 814 aa14.41□□□□□ -0.1
CHRNB4-204ENST00000559849 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.41□□□□□ -0.1
CHRNB4-204ENST00000559849 CAVIN2O95810 425 aa14.4□□□□□ -0.1
CHRNB4-204ENST00000559849 OLFM2O95897 454 aa14.4□□□□□ -0.1
CHRNB4-204ENST00000559849 RFX1P22670 979 aa14.4□□□□□ -0.1
CHRNB4-204ENST00000559849 BRD2P25440 801 aaKnown RBP14.4□□□□□ -0.1
CHRNB4-204ENST00000559849 USP8P40818 1118 aa14.4□□□□□ -0.1
CHRNB4-204ENST00000559849 PLA2G4AP47712 749 aa14.4□□□□□ -0.1
CHRNB4-204ENST00000559849 PSEN1P49768 467 aa14.4□□□□□ -0.1
CHRNB4-204ENST00000559849 TUBP50607 506 aa14.4□□□□□ -0.1
CHRNB4-204ENST00000559849 KLHDC7AQ5VTJ3 777 aa14.4□□□□□ -0.1
CHRNB4-204ENST00000559849 CCDC186Q7Z3E2 898 aa14.4□□□□□ -0.1
CHRNB4-204ENST00000559849 PLCB1Q9NQ66 1216 aa14.4□□□□□ -0.1
CHRNB4-204ENST00000559849 FOXN3O00409 490 aaPredicted RBP14.4□□□□□ -0.1
CHRNB4-204ENST00000559849 MED7O43513 233 aa14.4□□□□□ -0.1
CHRNB4-204ENST00000559849 PDGFBP01127 241 aaPredicted RBP14.4□□□□□ -0.1
CHRNB4-204ENST00000559849 GNA15P30679 374 aa14.4□□□□□ -0.1
CHRNB4-204ENST00000559849 SLC7A9P82251 487 aa14.4□□□□□ -0.1
CHRNB4-204ENST00000559849 PRKCQQ04759 706 aa14.4□□□□□ -0.1
CHRNB4-204ENST00000559849 ZSCAN23Q3MJ62 389 aa14.4□□□□□ -0.1
CHRNB4-204ENST00000559849 CC2D1AQ6P1N0 951 aaPredicted RBP14.4□□□□□ -0.1
CHRNB4-204ENST00000559849 SUGP1Q8IWZ8 645 aaKnown RBP14.4□□□□□ -0.1
CHRNB4-204ENST00000559849 SLC35F5Q8WV83 523 aa14.4□□□□□ -0.1
CHRNB4-204ENST00000559849 ZNF606Q8WXB4 792 aa14.4□□□□□ -0.1
CHRNB4-204ENST00000559849 LRRC4Q9HBW1 653 aa14.4□□□□□ -0.1
CHRNB4-204ENST00000559849 TULP2O00295 520 aa14.39□□□□□ -0.11
CHRNB4-204ENST00000559849 STK25O00506 426 aa14.39□□□□□ -0.11
CHRNB4-204ENST00000559849 CYP26A1O43174 497 aa14.39□□□□□ -0.11
CHRNB4-204ENST00000559849 ATP1A3P13637 1013 aa14.39□□□□□ -0.11
CHRNB4-204ENST00000559849 UCHL3P15374 230 aa14.39□□□□□ -0.11
CHRNB4-204ENST00000559849 TCF3P15923 654 aa14.39□□□□□ -0.11
CHRNB4-204ENST00000559849 TKTL1P51854 596 aa14.39□□□□□ -0.11
CHRNB4-204ENST00000559849 STARD6P59095 220 aa14.39□□□□□ -0.11
CHRNB4-204ENST00000559849 PTK2Q05397 1052 aa14.39□□□□□ -0.11
CHRNB4-204ENST00000559849 IQCB1Q15051 598 aa14.39□□□□□ -0.11
CHRNB4-204ENST00000559849 MLF2Q15773 248 aaPredicted RBP14.39□□□□□ -0.11
CHRNB4-204ENST00000559849 MEA1Q16626 185 aa14.39□□□□□ -0.11
CHRNB4-204ENST00000559849 PM20D1Q6GTS8 502 aa14.39□□□□□ -0.11
CHRNB4-204ENST00000559849 FLCNQ8NFG4 579 aa14.39□□□□□ -0.11
CHRNB4-204ENST00000559849 CSGALNACT1Q8TDX6 532 aa14.39□□□□□ -0.11
CHRNB4-204ENST00000559849 SH3RF2Q8TEC5 729 aa14.39□□□□□ -0.11
CHRNB4-204ENST00000559849 KCTD13Q8WZ19 329 aa14.39□□□□□ -0.11
CHRNB4-204ENST00000559849 LSM14BQ9BX40 385 aaKnown RBP14.39□□□□□ -0.11
CHRNB4-204ENST00000559849 HEBP1Q9NRV9 189 aa14.39□□□□□ -0.11
CHRNB4-204ENST00000559849 GKN1Q9NS71 199 aa14.39□□□□□ -0.11
CHRNB4-204ENST00000559849 MYO16Q9Y6X6 1858 aa14.39□□□□□ -0.11
CHRNB4-204ENST00000559849 LGALS16A8MUM7 142 aa14.38□□□□□ -0.11
CHRNB4-204ENST00000559849 M0QYV0 167 aa14.38□□□□□ -0.11
CHRNB4-204ENST00000559849 ARNTLO00327 626 aa14.38□□□□□ -0.11
CHRNB4-204ENST00000559849 COCHO43405 550 aa14.38□□□□□ -0.11
CHRNB4-204ENST00000559849 THAP12O43422 761 aa14.38□□□□□ -0.11
CHRNB4-204ENST00000559849 TLR5O60602 858 aa14.38□□□□□ -0.11
CHRNB4-204ENST00000559849 ZBED1O96006 694 aa14.38□□□□□ -0.11
CHRNB4-204ENST00000559849 CALCAP01258 141 aa14.38□□□□□ -0.11
CHRNB4-204ENST00000559849 PGFP49763 221 aa14.38□□□□□ -0.11
CHRNB4-204ENST00000559849 CLCN5P51795 746 aa14.38□□□□□ -0.11
CHRNB4-204ENST00000559849 UBXN1Q04323 297 aa14.38□□□□□ -0.11
CHRNB4-204ENST00000559849 RAPGEF1Q13905 1077 aa14.38□□□□□ -0.11
CHRNB4-204ENST00000559849 IER5LQ5T953 404 aa14.38□□□□□ -0.11
CHRNB4-204ENST00000559849 TTC16Q8NEE8 873 aa14.38□□□□□ -0.11
CHRNB4-204ENST00000559849 SECISBP2LQ93073 1101 aaKnown RBP14.38□□□□□ -0.11
CHRNB4-204ENST00000559849 ZFYVE19Q96K21 471 aa14.38□□□□□ -0.11
CHRNB4-204ENST00000559849 NAA15Q9BXJ9 866 aaKnown RBP14.38□□□□□ -0.11
CHRNB4-204ENST00000559849 CCSER2Q9H7U1 834 aa14.38□□□□□ -0.11
CHRNB4-204ENST00000559849 CYLDQ9NQC7 956 aa14.38□□□□□ -0.11
CHRNB4-204ENST00000559849 CLIC5Q9NZA1 410 aa14.38□□□□□ -0.11
CHRNB4-204ENST00000559849 AJAP1Q9UKB5 411 aaPredicted RBP14.38□□□□□ -0.11
CHRNB4-204ENST00000559849 ZNF318Q5VUA4 2279 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms