RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 TAF6P49848 677 aa6.24□□□□□ -1.41
USP3-215ENST00000559771 ZXDBP98169 803 aa6.24□□□□□ -1.41
USP3-215ENST00000559771 RUNX3Q13761 415 aa6.24□□□□□ -1.41
USP3-215ENST00000559771 LRRC32Q14392 662 aa6.24□□□□□ -1.41
USP3-215ENST00000559771 CSRP2Q16527 193 aa6.24□□□□□ -1.41
USP3-215ENST00000559771 ITPRIPL2Q3MIP1 535 aa6.24□□□□□ -1.41
USP3-215ENST00000559771 MGAT5BQ3V5L5 792 aa6.24□□□□□ -1.41
USP3-215ENST00000559771 LARP1BQ659C4 914 aaKnown RBP6.24□□□□□ -1.41
USP3-215ENST00000559771 TXNDC8Q6A555 127 aa6.24□□□□□ -1.41
USP3-215ENST00000559771 ARMCX5Q6P1M9 558 aa6.24□□□□□ -1.41
USP3-215ENST00000559771 FAM173BQ6P4H8 233 aa6.24□□□□□ -1.41
USP3-215ENST00000559771 C1orf228Q6PIY5 440 aa6.24□□□□□ -1.41
USP3-215ENST00000559771 PRR23BQ6ZRT6 265 aa6.24□□□□□ -1.41
USP3-215ENST00000559771 DYMQ7RTS9 669 aa6.24□□□□□ -1.41
USP3-215ENST00000559771 LIMS2Q7Z4I7 341 aa6.24□□□□□ -1.41
USP3-215ENST00000559771 ITIH5Q86UX2 942 aa6.24□□□□□ -1.41
USP3-215ENST00000559771 WDR5BQ86VZ2 330 aa6.24□□□□□ -1.41
USP3-215ENST00000559771 YAF2Q8IY57 180 aa6.24□□□□□ -1.41
USP3-215ENST00000559771 CMTM8Q8IZV2 173 aa6.24□□□□□ -1.41
USP3-215ENST00000559771 SYNPOQ8N3V7 929 aa6.24□□□□□ -1.41
USP3-215ENST00000559771 PDCL2Q8N4E4 241 aa6.24□□□□□ -1.41
USP3-215ENST00000559771 MAB21L3Q8N8X9 362 aa6.24□□□□□ -1.41
USP3-215ENST00000559771 C1orf127Q8N9H9 656 aa6.24□□□□□ -1.41
USP3-215ENST00000559771 SPPL2BQ8TCT7 592 aa6.24□□□□□ -1.41
USP3-215ENST00000559771 C2orf15Q8WU43 125 aaKnown RBP6.24□□□□□ -1.41
USP3-215ENST00000559771 WFDC12Q8WWY7 111 aa6.24□□□□□ -1.41
USP3-215ENST00000559771 CALML4Q96GE6 196 aa6.24□□□□□ -1.41
USP3-215ENST00000559771 MEGF10Q96KG7 1140 aa6.24□□□□□ -1.41
USP3-215ENST00000559771 CLIC6Q96NY7 704 aa6.24□□□□□ -1.41
USP3-215ENST00000559771 ZHX3Q9H4I2 956 aa6.24□□□□□ -1.41
USP3-215ENST00000559771 EBF3Q9H4W6 596 aa6.24□□□□□ -1.41
USP3-215ENST00000559771 ABI2Q9NYB9 513 aaPredicted RBP6.24□□□□□ -1.41
USP3-215ENST00000559771 SIX4Q9UIU6 781 aa6.24□□□□□ -1.41
USP3-215ENST00000559771 GMEB2Q9UKD1 530 aa6.24□□□□□ -1.41
USP3-215ENST00000559771 L1RE1Q9UN81 338 aa6.24□□□□□ -1.41
USP3-215ENST00000559771 NME7Q9Y5B8 376 aa6.24□□□□□ -1.41
USP3-215ENST00000559771 ATG2BQ96BY7 2078 aa6.24□□□□□ -1.41
USP3-215ENST00000559771 CFAP47Q6ZTR5 3102 aa6.23□□□□□ -1.41
USP3-215ENST00000559771 SPTBN2O15020 2390 aa6.23□□□□□ -1.41
USP3-215ENST00000559771 USP24Q9UPU5 2620 aa6.23□□□□□ -1.41
USP3-215ENST00000559771 H3BQV1 296 aa6.23□□□□□ -1.41
USP3-215ENST00000559771 TRDMT1O14717 391 aaKnown RBP6.23□□□□□ -1.41
USP3-215ENST00000559771 GABRDO14764 452 aa6.23□□□□□ -1.41
USP3-215ENST00000559771 TBCAO75347 108 aaKnown RBP6.23□□□□□ -1.41
USP3-215ENST00000559771 NOL4O94818 638 aa6.23□□□□□ -1.41
USP3-215ENST00000559771 FGF19O95750 216 aa6.23□□□□□ -1.41
USP3-215ENST00000559771 EGFP01133 1207 aa6.23□□□□□ -1.41
USP3-215ENST00000559771 ITGB3P05106 788 aa6.23□□□□□ -1.41
USP3-215ENST00000559771 FAM157BP0CG42 384 aa6.23□□□□□ -1.41
USP3-215ENST00000559771 SDHBP21912 280 aa6.23□□□□□ -1.41
USP3-215ENST00000559771 ACAT1P24752 427 aaKnown RBP6.23□□□□□ -1.41
USP3-215ENST00000559771 CYP2F1P24903 491 aa6.23□□□□□ -1.41
USP3-215ENST00000559771 CDC25CP30307 473 aa6.23□□□□□ -1.41
USP3-215ENST00000559771 POLR2BP30876 1174 aaKnown RBP6.23□□□□□ -1.41
USP3-215ENST00000559771 CNR2P34972 360 aa6.23□□□□□ -1.41
USP3-215ENST00000559771 HOXD13P35453 343 aa6.23□□□□□ -1.41
USP3-215ENST00000559771 GALK1P51570 392 aa6.23□□□□□ -1.41
USP3-215ENST00000559771 RESTQ13127 1097 aa6.23□□□□□ -1.41
USP3-215ENST00000559771 CUL4AQ13619 759 aa6.23□□□□□ -1.41
USP3-215ENST00000559771 PPP2R5DQ14738 602 aa6.23□□□□□ -1.41
USP3-215ENST00000559771 SF3A2Q15428 464 aaKnown RBP6.23□□□□□ -1.41
USP3-215ENST00000559771 NFKBIBQ15653 356 aa6.23□□□□□ -1.41
USP3-215ENST00000559771 CCDC6Q16204 474 aa6.23□□□□□ -1.41
USP3-215ENST00000559771 DDR2Q16832 855 aa6.23□□□□□ -1.41
USP3-215ENST00000559771 GAB4Q2WGN9 574 aa6.23□□□□□ -1.41
USP3-215ENST00000559771 ARHGAP15Q53QZ3 475 aa6.23□□□□□ -1.41
USP3-215ENST00000559771 PPM1JQ5JR12 505 aa6.23□□□□□ -1.41
USP3-215ENST00000559771 SLFN12LQ6IEE8 588 aa6.23□□□□□ -1.41
USP3-215ENST00000559771 BRAPQ7Z569 592 aa6.23□□□□□ -1.41
USP3-215ENST00000559771 KBTBD6Q86V97 674 aa6.23□□□□□ -1.41
USP3-215ENST00000559771 MON1AQ86VX9 555 aa6.23□□□□□ -1.41
USP3-215ENST00000559771 BRSK2Q8IWQ3 736 aa6.23□□□□□ -1.41
USP3-215ENST00000559771 GLIS3Q8NEA6 775 aa6.23□□□□□ -1.41
USP3-215ENST00000559771 FAM200AQ8TCP9 573 aa6.23□□□□□ -1.41
USP3-215ENST00000559771 NETO1Q8TDF5 533 aa6.23□□□□□ -1.41
USP3-215ENST00000559771 RHBDD1Q8TEB9 315 aa6.23□□□□□ -1.41
USP3-215ENST00000559771 LEO1Q8WVC0 666 aaPredicted RBP6.23□□□□□ -1.41
USP3-215ENST00000559771 POMGNT1Q8WZA1 660 aa6.23□□□□□ -1.41
USP3-215ENST00000559771 SECISBP2LQ93073 1101 aaKnown RBP6.23□□□□□ -1.41
USP3-215ENST00000559771 HVCN1Q96D96 273 aa6.23□□□□□ -1.41
USP3-215ENST00000559771 SAAL1Q96ER3 474 aa6.23□□□□□ -1.41
USP3-215ENST00000559771 MYRFLQ96LU7 910 aa6.23□□□□□ -1.41
USP3-215ENST00000559771 CYP2S1Q96SQ9 504 aa6.23□□□□□ -1.41
USP3-215ENST00000559771 ACBD6Q9BR61 282 aa6.23□□□□□ -1.41
USP3-215ENST00000559771 CBWD1Q9BRT8 395 aa6.23□□□□□ -1.41
USP3-215ENST00000559771 FAM213AQ9BRX8 229 aa6.23□□□□□ -1.41
USP3-215ENST00000559771 PI4K2AQ9BTU6 479 aa6.23□□□□□ -1.41
USP3-215ENST00000559771 TBC1D7Q9P0N9 293 aa6.23□□□□□ -1.41
USP3-215ENST00000559771 GCNT4Q9P109 453 aa6.23□□□□□ -1.41
USP3-215ENST00000559771 GTF3C4Q9UKN8 822 aa6.23□□□□□ -1.41
USP3-215ENST00000559771 DSEQ9UL01 958 aa6.23□□□□□ -1.41
USP3-215ENST00000559771 KIF3AQ9Y496 699 aa6.23□□□□□ -1.41
USP3-215ENST00000559771 PCDHB5Q9Y5E4 795 aa6.23□□□□□ -1.41
USP3-215ENST00000559771 CHD8Q9HCK8 2581 aa6.22□□□□□ -1.41
USP3-215ENST00000559771 SPAG17Q6Q759 2223 aa6.22□□□□□ -1.41
USP3-215ENST00000559771 CCDC163A0A0D9SF12 145 aa6.22□□□□□ -1.41
USP3-215ENST00000559771 A0A1W2PNR3 127 aa6.22□□□□□ -1.41
USP3-215ENST00000559771 GOLGA8IPA6NC78 632 aa6.22□□□□□ -1.41
USP3-215ENST00000559771 C2orf78A6NCI8 922 aa6.22□□□□□ -1.41
USP3-215ENST00000559771 GOLGA8JA6NMD2 632 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms