RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 HDCP19113 662 aa10.13□□□□□ -0.79
NEDD1-211ENST00000557454 EFNA5P52803 228 aa10.13□□□□□ -0.79
NEDD1-211ENST00000557454 GABREP78334 506 aa10.13□□□□□ -0.79
NEDD1-211ENST00000557454 INSM1Q01101 510 aaPredicted RBP10.13□□□□□ -0.79
NEDD1-211ENST00000557454 AKAP17AQ02040 695 aaKnown RBP10.13□□□□□ -0.79
NEDD1-211ENST00000557454 TEAD4Q15561 434 aa10.13□□□□□ -0.79
NEDD1-211ENST00000557454 DDR2Q16832 855 aa10.13□□□□□ -0.79
NEDD1-211ENST00000557454 SLC10A6Q3KNW5 377 aa10.13□□□□□ -0.79
NEDD1-211ENST00000557454 PADI6Q6TGC4 694 aa10.13□□□□□ -0.79
NEDD1-211ENST00000557454 ETFBKMTQ8IXQ9 262 aa10.13□□□□□ -0.79
NEDD1-211ENST00000557454 TERB1Q8NA31 727 aa10.13□□□□□ -0.79
NEDD1-211ENST00000557454 VCPIP1Q96JH7 1222 aa10.13□□□□□ -0.79
NEDD1-211ENST00000557454 DRC1Q96MC2 740 aa10.13□□□□□ -0.79
NEDD1-211ENST00000557454 ACO2Q99798 780 aaKnown RBP10.13□□□□□ -0.79
NEDD1-211ENST00000557454 GABRG3Q99928 467 aa10.13□□□□□ -0.79
NEDD1-211ENST00000557454 TTC12Q9H892 705 aaPredicted RBP10.13□□□□□ -0.79
NEDD1-211ENST00000557454 PLEKHB1Q9UF11 243 aaPredicted RBP10.13□□□□□ -0.79
NEDD1-211ENST00000557454 CCDC196A0A1B0GTZ2 297 aa10.12□□□□□ -0.79
NEDD1-211ENST00000557454 C2orf72A6NCS6 295 aa10.12□□□□□ -0.79
NEDD1-211ENST00000557454 LAD1O00515 517 aa10.12□□□□□ -0.79
NEDD1-211ENST00000557454 ABLIM1O14639 778 aa10.12□□□□□ -0.79
NEDD1-211ENST00000557454 TULP3O75386 442 aa10.12□□□□□ -0.79
NEDD1-211ENST00000557454 PRPF40AO75400 957 aaKnown RBP10.12□□□□□ -0.79
NEDD1-211ENST00000557454 NFICP08651 508 aa10.12□□□□□ -0.79
NEDD1-211ENST00000557454 MCF2P10911 925 aa10.12□□□□□ -0.79
NEDD1-211ENST00000557454 CTSKP43235 329 aa10.12□□□□□ -0.79
NEDD1-211ENST00000557454 GRIA4P48058 902 aa10.12□□□□□ -0.79
NEDD1-211ENST00000557454 RCAN1P53805 252 aa10.12□□□□□ -0.79
NEDD1-211ENST00000557454 SAFBQ15424 915 aaKnown RBP eCLIP10.12□□□□□ -0.79
NEDD1-211ENST00000557454 IGFBP7Q16270 282 aa10.12□□□□□ -0.79
NEDD1-211ENST00000557454 LY6G5CQ5SRR4 150 aa10.12□□□□□ -0.79
NEDD1-211ENST00000557454 SDE2Q6IQ49 451 aa10.12□□□□□ -0.79
NEDD1-211ENST00000557454 CCDC81Q6ZN84 652 aa10.12□□□□□ -0.79
NEDD1-211ENST00000557454 DHX32Q7L7V1 743 aaKnown RBP10.12□□□□□ -0.79
NEDD1-211ENST00000557454 BLIDQ8IZY5 108 aa10.12□□□□□ -0.79
NEDD1-211ENST00000557454 CACTIN-AS1Q8N1I8 211 aa10.12□□□□□ -0.79
NEDD1-211ENST00000557454 KRI1Q8N9T8 703 aaKnown RBP10.12□□□□□ -0.79
NEDD1-211ENST00000557454 RFFLQ8WZ73 363 aa10.12□□□□□ -0.79
NEDD1-211ENST00000557454 TRMT2BQ96GJ1 504 aaKnown RBP10.12□□□□□ -0.79
NEDD1-211ENST00000557454 TARS2Q9BW92 718 aaKnown RBP10.12□□□□□ -0.79
NEDD1-211ENST00000557454 SLC26A6Q9BXS9 759 aa10.12□□□□□ -0.79
NEDD1-211ENST00000557454 POLD4Q9HCU8 107 aa10.12□□□□□ -0.79
NEDD1-211ENST00000557454 TM9SF3Q9HD45 589 aa10.12□□□□□ -0.79
NEDD1-211ENST00000557454 TMLHEQ9NVH6 421 aa10.12□□□□□ -0.79
NEDD1-211ENST00000557454 SMPD4Q9NXE4 827 aa10.12□□□□□ -0.79
NEDD1-211ENST00000557454 DAXXQ9UER7 740 aaPredicted RBP10.12□□□□□ -0.79
NEDD1-211ENST00000557454 PCDHB5Q9Y5E4 795 aa10.12□□□□□ -0.79
NEDD1-211ENST00000557454 CACNA1DQ01668 2161 aa10.12□□□□□ -0.79
NEDD1-211ENST00000557454 FBN3Q75N90 2809 aa10.11□□□□□ -0.79
NEDD1-211ENST00000557454 TMEM131Q92545 1883 aa10.11□□□□□ -0.79
NEDD1-211ENST00000557454 A0A1B0GTQ1 180 aa10.11□□□□□ -0.79
NEDD1-211ENST00000557454 SLC9A3R1O14745 358 aaPredicted RBP10.11□□□□□ -0.79
NEDD1-211ENST00000557454 CCNT1O60563 726 aaKnown RBP10.11□□□□□ -0.79
NEDD1-211ENST00000557454 DXOO77932 396 aaKnown RBP10.11□□□□□ -0.79
NEDD1-211ENST00000557454 CYP11A1P05108 521 aa10.11□□□□□ -0.79
NEDD1-211ENST00000557454 FAM87AP0C7U9 286 aa10.11□□□□□ -0.79
NEDD1-211ENST00000557454 CXCL8P10145 99 aa10.11□□□□□ -0.79
NEDD1-211ENST00000557454 TPMTP51580 245 aa10.11□□□□□ -0.79
NEDD1-211ENST00000557454 LILRA4P59901 499 aa10.11□□□□□ -0.79
NEDD1-211ENST00000557454 ERVPABLB-1P60509 514 aa10.11□□□□□ -0.79
NEDD1-211ENST00000557454 SMARCB1Q12824 385 aa10.11□□□□□ -0.79
NEDD1-211ENST00000557454 PPP2R5AQ15172 486 aa10.11□□□□□ -0.79
NEDD1-211ENST00000557454 PRAMEF14Q5SWL7 426 aa10.11□□□□□ -0.79
NEDD1-211ENST00000557454 CREB3L3Q68CJ9 461 aa10.11□□□□□ -0.79
NEDD1-211ENST00000557454 EID2Q8N6I1 236 aa10.11□□□□□ -0.79
NEDD1-211ENST00000557454 EXTL1Q92935 676 aa10.11□□□□□ -0.79
NEDD1-211ENST00000557454 MYRFLQ96LU7 910 aa10.11□□□□□ -0.79
NEDD1-211ENST00000557454 ARHGAP9Q9BRR9 750 aa10.11□□□□□ -0.79
NEDD1-211ENST00000557454 TCHPQ9BT92 498 aa10.11□□□□□ -0.79
NEDD1-211ENST00000557454 EPN3Q9H201 632 aa10.11□□□□□ -0.79
NEDD1-211ENST00000557454 ASCL3Q9NQ33 180 aa10.11□□□□□ -0.79
NEDD1-211ENST00000557454 SH3GLB2Q9NR46 395 aa10.11□□□□□ -0.79
NEDD1-211ENST00000557454 DEC1Q9P2X7 70 aa10.11□□□□□ -0.79
NEDD1-211ENST00000557454 STARD13Q9Y3M8 1113 aa10.11□□□□□ -0.79
NEDD1-211ENST00000557454 PHLPP2Q6ZVD8 1323 aa10.1□□□□□ -0.79
NEDD1-211ENST00000557454 WASH3PC4AMC7 463 aa10.1□□□□□ -0.79
NEDD1-211ENST00000557454 K7ERI5 159 aa10.1□□□□□ -0.79
NEDD1-211ENST00000557454 TRAK2O60296 914 aa10.1□□□□□ -0.79
NEDD1-211ENST00000557454 MT-CO3P00414 261 aa10.1□□□□□ -0.79
NEDD1-211ENST00000557454 ITGAVP06756 1048 aa10.1□□□□□ -0.79
NEDD1-211ENST00000557454 C7P10643 843 aa10.1□□□□□ -0.79
NEDD1-211ENST00000557454 GCFC2P16383 781 aaKnown RBP10.1□□□□□ -0.79
NEDD1-211ENST00000557454 PROZP22891 400 aa10.1□□□□□ -0.79
NEDD1-211ENST00000557454 GRIK1P39086 918 aa10.1□□□□□ -0.79
NEDD1-211ENST00000557454 FOXK1P85037 733 aa10.1□□□□□ -0.79
NEDD1-211ENST00000557454 EXOSC10Q01780 885 aaKnown RBP10.1□□□□□ -0.79
NEDD1-211ENST00000557454 GAD2Q05329 585 aa10.1□□□□□ -0.79
NEDD1-211ENST00000557454 ILKQ13418 452 aa10.1□□□□□ -0.79
NEDD1-211ENST00000557454 NPY5RQ15761 445 aa10.1□□□□□ -0.79
NEDD1-211ENST00000557454 FUT11Q495W5 492 aa10.1□□□□□ -0.79
NEDD1-211ENST00000557454 BTBD8Q5XKL5 378 aa10.1□□□□□ -0.79
NEDD1-211ENST00000557454 MPZL3Q6UWV2 235 aa10.1□□□□□ -0.79
NEDD1-211ENST00000557454 NEK8Q86SG6 692 aa10.1□□□□□ -0.79
NEDD1-211ENST00000557454 METTL3Q86U44 580 aaKnown RBP10.1□□□□□ -0.79
NEDD1-211ENST00000557454 CACUL1Q86Y37 369 aa10.1□□□□□ -0.79
NEDD1-211ENST00000557454 LSMEM2Q8N112 164 aa10.1□□□□□ -0.79
NEDD1-211ENST00000557454 FSIP1Q8NA03 581 aa10.1□□□□□ -0.79
NEDD1-211ENST00000557454 ZBTB45Q96K62 511 aaPredicted RBP10.1□□□□□ -0.79
NEDD1-211ENST00000557454 RNF26Q9BY78 433 aaPredicted RBP10.1□□□□□ -0.79
NEDD1-211ENST00000557454 MRPL4Q9BYD3 311 aaKnown RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms