RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 CLIC2O15247 247 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 REM1O75628 298 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 NQO1P15559 274 aaKnown RBP9.11□□□□□ -0.95
SYNE3-205ENST00000557275 CHN2P52757 468 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 WASHC2DQ5SRD0 308 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 INTS11Q5TA45 600 aaKnown RBP9.11□□□□□ -0.95
SYNE3-205ENST00000557275 OTOAQ7RTW8 1153 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 STRA8Q7Z7C7 330 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 SPIRE2Q8WWL2 714 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 TRIT1Q9H3H1 467 aaKnown RBP9.11□□□□□ -0.95
SYNE3-205ENST00000557275 PCSK2P16519 638 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 GTF2H1P32780 548 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 COPZ1P61923 177 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 SAMD4BQ5PRF9 694 aaKnown RBP9.11□□□□□ -0.95
SYNE3-205ENST00000557275 SCARA5Q6ZMJ2 495 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 SPATA5L1Q9BVQ7 753 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 JMJD4Q9H9V9 463 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 ANXA1P04083 346 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 KPNA1P52294 538 aaPredicted RBP9.11□□□□□ -0.95
SYNE3-205ENST00000557275 CYP27A1Q02318 531 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 TWF1Q12792 350 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 ATP1A4Q13733 1029 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 COMMD2Q86X83 199 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 COL23A1Q86Y22 540 aaPredicted RBP9.11□□□□□ -0.95
SYNE3-205ENST00000557275 SPATA18Q8TC71 538 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 C17orf50Q8WW18 174 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 PCMTD2Q9NV79 361 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 ADPRHL2Q9NX46 363 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 P4HA2O15460 535 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 CPA1P15085 419 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 PCSK1P29120 753 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 FAM173BQ6P4H8 233 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 PNPLA8Q9NP80 782 aa9.11□□□□□ -0.95
SYNE3-205ENST00000557275 AAR2Q9Y312 384 aaKnown RBP9.11□□□□□ -0.95
SYNE3-205ENST00000557275 COL17A1Q9UMD9 1497 aaPredicted RBP9.1□□□□□ -0.95
SYNE3-205ENST00000557275 KIF20BQ96Q89 1820 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 RHOBTB3O94955 611 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 GPC1P35052 558 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 RPL3P39023 403 aaKnown RBP9.1□□□□□ -0.95
SYNE3-205ENST00000557275 EIF5AL1Q6IS14 154 aaKnown RBP9.1□□□□□ -0.95
SYNE3-205ENST00000557275 SCN4BQ8IWT1 228 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 ARHGAP28Q9P2N2 729 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 ITGA2P17301 1181 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 FGFR4P22455 802 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 CCZ1BP86790 482 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 CCZ1P86791 482 aaPredicted RBP9.1□□□□□ -0.95
SYNE3-205ENST00000557275 C3orf62Q6ZUJ4 267 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 SAE1Q9UBE0 346 aaPredicted RBP9.1□□□□□ -0.95
SYNE3-205ENST00000557275 SKA1Q96BD8 255 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 PI4KBQ9UBF8 816 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 FTLP02792 175 aaPredicted RBP9.1□□□□□ -0.95
SYNE3-205ENST00000557275 FOSL2P15408 326 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 AKAP14Q86UN6 197 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 TMEM132CQ8N3T6 1108 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 ZNF513Q8N8E2 541 aaPredicted RBP9.1□□□□□ -0.95
SYNE3-205ENST00000557275 AGR3Q8TD06 166 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 RIN2Q8WYP3 895 aaPredicted RBP9.1□□□□□ -0.95
SYNE3-205ENST00000557275 GPAMQ9HCL2 828 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 TRPC4Q9UBN4 977 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 DRG1Q9Y295 367 aaKnown RBP9.1□□□□□ -0.95
SYNE3-205ENST00000557275 ANKRD6Q9Y2G4 727 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 H3BNX3 289 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 DHFRP00374 187 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 ASNSP08243 561 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 ITIH1P19827 911 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 CDH3P22223 829 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 PTPN4P29074 926 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 KCNB1Q14721 858 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 SLC18A3Q16572 532 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 PLA2G4FQ68DD2 849 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 LRRC47Q8N1G4 583 aaKnown RBP9.1□□□□□ -0.95
SYNE3-205ENST00000557275 TMA7Q9Y2S6 64 aaKnown RBP9.1□□□□□ -0.95
SYNE3-205ENST00000557275 SQORQ9Y6N5 450 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 PIGBOS1A0A0B4J2F0 54 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 AKAP8O43823 692 aaKnown RBP9.1□□□□□ -0.95
SYNE3-205ENST00000557275 ATG7O95352 703 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 PRKAR2AP13861 404 aaKnown RBP9.1□□□□□ -0.95
SYNE3-205ENST00000557275 ARPC4P59998 168 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 DLG1Q12959 904 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 DENND1BQ6P3S1 775 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 SLC38A2Q96QD8 506 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 SLC52A2Q9HAB3 445 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 EURLQ9NYK6 297 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 WHRNQ9P202 907 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 DMTF1Q9Y222 760 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 A0A087X0T9 212 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 P4HBP07237 508 aaKnown RBP9.1□□□□□ -0.95
SYNE3-205ENST00000557275 GJA8P48165 433 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 CDH7Q9ULB5 785 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 IL18RAPO95256 599 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 ALOX12P18054 663 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 STOMP27105 288 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 KDM7AQ6ZMT4 941 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 IP6K1Q92551 441 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 COMMD3-BMI1R4GMX3 469 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 BIVM-ERCC5R4GMW8 1640 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 ANO7Q6IWH7 933 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 GJD3Q8N144 294 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 SMYD1Q8NB12 490 aa9.1□□□□□ -0.95
SYNE3-205ENST00000557275 ACTRT2Q8TDY3 377 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms