RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 DCUN1D2Q6PH85 259 aa11.6□□□□□ -0.55
TMEM260-208ENST00000555905 ELMSAN1Q6PJG2 1045 aa11.6□□□□□ -0.55
TMEM260-208ENST00000555905 CCDC149Q6ZUS6 474 aa11.6□□□□□ -0.55
TMEM260-208ENST00000555905 FAM183BPQ6ZVS7 135 aa11.6□□□□□ -0.55
TMEM260-208ENST00000555905 TCEAL8Q8IYN2 117 aa11.6□□□□□ -0.55
TMEM260-208ENST00000555905 NUP93Q8N1F7 819 aa11.6□□□□□ -0.55
TMEM260-208ENST00000555905 TTC9BQ8N6N2 239 aa11.6□□□□□ -0.55
TMEM260-208ENST00000555905 ZNF564Q8TBZ8 553 aaPredicted RBP11.6□□□□□ -0.55
TMEM260-208ENST00000555905 GDPD5Q8WTR4 605 aa11.6□□□□□ -0.55
TMEM260-208ENST00000555905 MCRS1Q96EZ8 462 aa11.6□□□□□ -0.55
TMEM260-208ENST00000555905 CRISPLD1Q9H336 500 aa11.6□□□□□ -0.55
TMEM260-208ENST00000555905 FBXO44Q9H4M3 255 aa11.6□□□□□ -0.55
TMEM260-208ENST00000555905 CNGB3Q9NQW8 809 aa11.6□□□□□ -0.55
TMEM260-208ENST00000555905 COMMD8Q9NX08 183 aa11.6□□□□□ -0.55
TMEM260-208ENST00000555905 EHD2Q9NZN4 543 aa11.6□□□□□ -0.55
TMEM260-208ENST00000555905 TJP2Q9UDY2 1190 aa11.6□□□□□ -0.55
TMEM260-208ENST00000555905 LCMT1Q9UIC8 334 aa11.6□□□□□ -0.55
TMEM260-208ENST00000555905 PAXBP1Q9Y5B6 917 aa11.6□□□□□ -0.55
TMEM260-208ENST00000555905 PCDHGC5Q9Y5F6 944 aa11.6□□□□□ -0.55
TMEM260-208ENST00000555905 PLXNA3P51805 1871 aa11.59□□□□□ -0.55
TMEM260-208ENST00000555905 COL4A4P53420 1690 aaPredicted RBP11.59□□□□□ -0.55
TMEM260-208ENST00000555905 CHD9Q3L8U1 2897 aa11.59□□□□□ -0.55
TMEM260-208ENST00000555905 RANBP2P49792 3224 aaKnown RBP11.59□□□□□ -0.55
TMEM260-208ENST00000555905 SIGLEC16A6NMB1 481 aa11.59□□□□□ -0.55
TMEM260-208ENST00000555905 TNFRSF10BO14763 440 aa11.59□□□□□ -0.55
TMEM260-208ENST00000555905 PAPSS1O43252 624 aaPredicted RBP11.59□□□□□ -0.55
TMEM260-208ENST00000555905 BUB1O43683 1085 aa11.59□□□□□ -0.55
TMEM260-208ENST00000555905 SOAT2O75908 522 aa11.59□□□□□ -0.55
TMEM260-208ENST00000555905 MTA2O94776 668 aa11.59□□□□□ -0.55
TMEM260-208ENST00000555905 SEC24AO95486 1093 aa11.59□□□□□ -0.55
TMEM260-208ENST00000555905 ZBED1O96006 694 aa11.59□□□□□ -0.55
TMEM260-208ENST00000555905 SPATA31D3P0C874 917 aa11.59□□□□□ -0.55
TMEM260-208ENST00000555905 KRT3P12035 628 aa11.59□□□□□ -0.55
TMEM260-208ENST00000555905 IRS1P35568 1242 aa11.59□□□□□ -0.55
TMEM260-208ENST00000555905 SCNN1AP37088 669 aa11.59□□□□□ -0.55
TMEM260-208ENST00000555905 GPR15P49685 360 aa11.59□□□□□ -0.55
TMEM260-208ENST00000555905 SLC5A3P53794 718 aa11.59□□□□□ -0.55
TMEM260-208ENST00000555905 EPHB3P54753 998 aa11.59□□□□□ -0.55
TMEM260-208ENST00000555905 VEPH1Q14D04 833 aa11.59□□□□□ -0.55
TMEM260-208ENST00000555905 TAF12Q16514 161 aa11.59□□□□□ -0.55
TMEM260-208ENST00000555905 EFHC1Q5JVL4 640 aa11.59□□□□□ -0.55
TMEM260-208ENST00000555905 SDHAF4Q5VUM1 108 aa11.59□□□□□ -0.55
TMEM260-208ENST00000555905 LLGL2Q6P1M3 1020 aa11.59□□□□□ -0.55
TMEM260-208ENST00000555905 OLFML1Q6UWY5 402 aa11.59□□□□□ -0.55
TMEM260-208ENST00000555905 SPATA31D4Q6ZUB0 917 aa11.59□□□□□ -0.55
TMEM260-208ENST00000555905 DENND5BQ6ZUT9 1274 aa11.59□□□□□ -0.55
TMEM260-208ENST00000555905 GPRIN1Q7Z2K8 1008 aa11.59□□□□□ -0.55
TMEM260-208ENST00000555905 FEZF2Q8TBJ5 459 aa11.59□□□□□ -0.55
TMEM260-208ENST00000555905 IRGQQ8WZA9 623 aa11.59□□□□□ -0.55
TMEM260-208ENST00000555905 GOLGA1Q92805 767 aa11.59□□□□□ -0.55
TMEM260-208ENST00000555905 PPP2R3CQ969Q6 453 aa11.59□□□□□ -0.55
TMEM260-208ENST00000555905 ALS2CR12Q96Q35 445 aa11.59□□□□□ -0.55
TMEM260-208ENST00000555905 TRIM62Q9BVG3 475 aa11.59□□□□□ -0.55
TMEM260-208ENST00000555905 ULBP1Q9BZM6 244 aa11.59□□□□□ -0.55
TMEM260-208ENST00000555905 ZNF576Q9H609 170 aa11.59□□□□□ -0.55
TMEM260-208ENST00000555905 METTL5Q9NRN9 209 aaKnown RBP11.59□□□□□ -0.55
TMEM260-208ENST00000555905 CHORDC1Q9UHD1 332 aaPredicted RBP11.59□□□□□ -0.55
TMEM260-208ENST00000555905 DPP7Q9UHL4 492 aa11.59□□□□□ -0.55
TMEM260-208ENST00000555905 YIPF1Q9Y548 306 aa11.59□□□□□ -0.55
TMEM260-208ENST00000555905 MTCL1Q9Y4B5 1905 aaKnown RBP11.58□□□□□ -0.55
TMEM260-208ENST00000555905 MYO16Q9Y6X6 1858 aa11.58□□□□□ -0.56
TMEM260-208ENST00000555905 TCRBV5S1A1TA0A578 114 aa11.58□□□□□ -0.56
TMEM260-208ENST00000555905 EPOPA6NHQ4 379 aa11.58□□□□□ -0.56
TMEM260-208ENST00000555905 MYO1FO00160 1098 aa11.58□□□□□ -0.56
TMEM260-208ENST00000555905 CLASP2O75122 1294 aaKnown RBP11.58□□□□□ -0.56
TMEM260-208ENST00000555905 MOCS3O95396 460 aa11.58□□□□□ -0.56
TMEM260-208ENST00000555905 ABL1P00519 1130 aa11.58□□□□□ -0.56
TMEM260-208ENST00000555905 GLI1P08151 1106 aa11.58□□□□□ -0.56
TMEM260-208ENST00000555905 USP17L7P0C7H9 530 aa11.58□□□□□ -0.56
TMEM260-208ENST00000555905 DESP17661 470 aa11.58□□□□□ -0.56
TMEM260-208ENST00000555905 ATF6P18850 670 aa11.58□□□□□ -0.56
TMEM260-208ENST00000555905 YWHAQP27348 245 aa11.58□□□□□ -0.56
TMEM260-208ENST00000555905 CLCN4P51793 760 aa11.58□□□□□ -0.56
TMEM260-208ENST00000555905 HADHBP55084 474 aaKnown RBP11.58□□□□□ -0.56
TMEM260-208ENST00000555905 RNASE9P60153 205 aaKnown RBP11.58□□□□□ -0.56
TMEM260-208ENST00000555905 MRPS5P82675 430 aaKnown RBP11.58□□□□□ -0.56
TMEM260-208ENST00000555905 TWF1Q12792 350 aa11.58□□□□□ -0.56
TMEM260-208ENST00000555905 IFRD2Q12894 506 aaPredicted RBP11.58□□□□□ -0.56
TMEM260-208ENST00000555905 PPP1R15BQ5SWA1 713 aa11.58□□□□□ -0.56
TMEM260-208ENST00000555905 PM20D1Q6GTS8 502 aa11.58□□□□□ -0.56
TMEM260-208ENST00000555905 LILRA6Q6PI73 481 aa11.58□□□□□ -0.56
TMEM260-208ENST00000555905 RTL10Q7L3V2 364 aa11.58□□□□□ -0.56
TMEM260-208ENST00000555905 SLC26A9Q7LBE3 791 aa11.58□□□□□ -0.56
TMEM260-208ENST00000555905 ITIH5Q86UX2 942 aa11.58□□□□□ -0.56
TMEM260-208ENST00000555905 SCML4Q8N228 414 aa11.58□□□□□ -0.56
TMEM260-208ENST00000555905 ARHGAP18Q8N392 663 aa11.58□□□□□ -0.56
TMEM260-208ENST00000555905 KREMEN2Q8NCW0 462 aa11.58□□□□□ -0.56
TMEM260-208ENST00000555905 SCAMP5Q8TAC9 235 aa11.58□□□□□ -0.56
TMEM260-208ENST00000555905 SLC7A14Q8TBB6 771 aa11.58□□□□□ -0.56
TMEM260-208ENST00000555905 GPR152Q8TDT2 470 aa11.58□□□□□ -0.56
TMEM260-208ENST00000555905 GIPC2Q8TF65 315 aa11.58□□□□□ -0.56
TMEM260-208ENST00000555905 MRPL38Q96DV4 380 aaKnown RBP11.58□□□□□ -0.56
TMEM260-208ENST00000555905 MCEEQ96PE7 176 aa11.58□□□□□ -0.56
TMEM260-208ENST00000555905 PLEKHA4Q9H4M7 779 aa11.58□□□□□ -0.56
TMEM260-208ENST00000555905 TLE6Q9H808 572 aa11.58□□□□□ -0.56
TMEM260-208ENST00000555905 OSGEPQ9NPF4 335 aa11.58□□□□□ -0.56
TMEM260-208ENST00000555905 ASNSD1Q9NWL6 643 aa11.58□□□□□ -0.56
TMEM260-208ENST00000555905 SALL4Q9UJQ4 1053 aa11.58□□□□□ -0.56
TMEM260-208ENST00000555905 ANAPC7Q9UJX3 599 aa11.58□□□□□ -0.56
TMEM260-208ENST00000555905 FBXW11Q9UKB1 542 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms