RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 TWNKQ96RR1 684 aa25.89■■□□□ 1.74
PRKCH-216ENST00000555542 SMOQ99835 787 aa25.89■■□□□ 1.74
PRKCH-216ENST00000555542 COMMD8Q9NX08 183 aa25.89■■□□□ 1.74
PRKCH-216ENST00000555542 GMIPQ9P107 970 aa25.89■■□□□ 1.74
PRKCH-216ENST00000555542 CFAP97Q9P2B7 532 aa25.89■■□□□ 1.74
PRKCH-216ENST00000555542 RIF1Q5UIP0 2472 aaKnown RBP25.88■■□□□ 1.73
PRKCH-216ENST00000555542 SLC9A3R1O14745 358 aaPredicted RBP25.88■■□□□ 1.73
PRKCH-216ENST00000555542 TNFRSF10BO14763 440 aa25.88■■□□□ 1.73
PRKCH-216ENST00000555542 SCAMP3O14828 347 aaKnown RBP25.88■■□□□ 1.73
PRKCH-216ENST00000555542 RNF40O75150 1001 aa25.88■■□□□ 1.73
PRKCH-216ENST00000555542 BEST1O76090 585 aa25.88■■□□□ 1.73
PRKCH-216ENST00000555542 FKBP3Q00688 224 aaKnown RBP25.88■■□□□ 1.73
PRKCH-216ENST00000555542 COBLL1Q53SF7 1204 aa25.88■■□□□ 1.73
PRKCH-216ENST00000555542 NAIF1Q69YI7 327 aaPredicted RBP25.88■■□□□ 1.73
PRKCH-216ENST00000555542 CYFIP2Q96F07 1278 aa25.88■■□□□ 1.73
PRKCH-216ENST00000555542 FBXO44Q9H4M3 255 aa25.88■■□□□ 1.73
PRKCH-216ENST00000555542 MYO16Q9Y6X6 1858 aa25.87■■□□□ 1.73
PRKCH-216ENST00000555542 SLC16A3O15427 465 aaKnown RBP25.87■■□□□ 1.73
PRKCH-216ENST00000555542 COCHO43405 550 aa25.87■■□□□ 1.73
PRKCH-216ENST00000555542 PAPSS2O95340 614 aaPredicted RBP25.87■■□□□ 1.73
PRKCH-216ENST00000555542 LRRC63Q05C16 580 aa25.87■■□□□ 1.73
PRKCH-216ENST00000555542 DMWDQ09019 674 aa25.87■■□□□ 1.73
PRKCH-216ENST00000555542 ZNF394Q53GI3 561 aa25.87■■□□□ 1.73
PRKCH-216ENST00000555542 ANKRD40Q6AI12 368 aa25.87■■□□□ 1.73
PRKCH-216ENST00000555542 ISM2Q6H9L7 571 aa25.87■■□□□ 1.73
PRKCH-216ENST00000555542 ZMIZ2Q8NF64 920 aa25.87■■□□□ 1.73
PRKCH-216ENST00000555542 FBRSL1Q9HCM7 1045 aaKnown RBP25.87■■□□□ 1.73
PRKCH-216ENST00000555542 CSNK1G1Q9HCP0 422 aa25.87■■□□□ 1.73
PRKCH-216ENST00000555542 C2orf42Q9NWW7 574 aa25.87■■□□□ 1.73
PRKCH-216ENST00000555542 RAB20Q9NX57 234 aa25.87■■□□□ 1.73
PRKCH-216ENST00000555542 GMEB2Q9UKD1 530 aa25.87■■□□□ 1.73
PRKCH-216ENST00000555542 SLC8A2Q9UPR5 921 aa25.87■■□□□ 1.73
PRKCH-216ENST00000555542 TRIM49BA6NDI0 452 aa25.86■■□□□ 1.73
PRKCH-216ENST00000555542 K7ESF4 209 aa25.86■■□□□ 1.73
PRKCH-216ENST00000555542 PSMA7O14818 248 aa25.86■■□□□ 1.73
PRKCH-216ENST00000555542 CILPO75339 1184 aa25.86■■□□□ 1.73
PRKCH-216ENST00000555542 LPAL2Q16609 132 aa25.86■■□□□ 1.73
PRKCH-216ENST00000555542 FBXO43Q4G163 708 aa25.86■■□□□ 1.73
PRKCH-216ENST00000555542 PKN3Q6P5Z2 889 aa25.86■■□□□ 1.73
PRKCH-216ENST00000555542 LONP2Q86WA8 852 aa25.86■■□□□ 1.73
PRKCH-216ENST00000555542 SPATA20Q8TB22 786 aa25.86■■□□□ 1.73
PRKCH-216ENST00000555542 SEMA4DQ92854 862 aa25.86■■□□□ 1.73
PRKCH-216ENST00000555542 HNRNPABQ99729 332 aaKnown RBP25.86■■□□□ 1.73
PRKCH-216ENST00000555542 CCSER2Q9H7U1 834 aa25.86■■□□□ 1.73
PRKCH-216ENST00000555542 TLR8Q9NR97 1041 aaKnown RBP25.86■■□□□ 1.73
PRKCH-216ENST00000555542 SH3BP1Q9Y3L3 701 aa25.86■■□□□ 1.73
PRKCH-216ENST00000555542 TUBP50607 506 aa25.85■■□□□ 1.73
PRKCH-216ENST00000555542 PMS1P54277 932 aaKnown RBP25.85■■□□□ 1.73
PRKCH-216ENST00000555542 SIM2Q14190 667 aaPredicted RBP25.85■■□□□ 1.73
PRKCH-216ENST00000555542 CLEC20AQ6ZU45 233 aa25.85■■□□□ 1.73
PRKCH-216ENST00000555542 KIAA1958Q8N8K9 716 aa25.85■■□□□ 1.73
PRKCH-216ENST00000555542 HEXIM2Q96MH2 286 aaKnown RBP25.85■■□□□ 1.73
PRKCH-216ENST00000555542 IL37Q9NZH6 218 aa25.85■■□□□ 1.73
PRKCH-216ENST00000555542 ATG2BQ96BY7 2078 aa25.84■■□□□ 1.73
PRKCH-216ENST00000555542 TTC39CQ8N584 583 aa25.84■■□□□ 1.73
PRKCH-216ENST00000555542 RPLP0P6Q8NHW5 317 aa25.84■■□□□ 1.73
PRKCH-216ENST00000555542 CFAP54Q96N23 3096 aa25.84■■□□□ 1.73
PRKCH-216ENST00000555542 TBC1D14Q9P2M4 693 aa25.84■■□□□ 1.73
PRKCH-216ENST00000555542 ARMCX3Q9UH62 379 aaPredicted RBP25.84■■□□□ 1.73
PRKCH-216ENST00000555542 MAN1B1Q9UKM7 699 aa25.84■■□□□ 1.73
PRKCH-216ENST00000555542 CYP17A1P05093 508 aa25.83■■□□□ 1.73
PRKCH-216ENST00000555542 IRF1P10914 325 aa25.83■■□□□ 1.73
PRKCH-216ENST00000555542 ACO1P21399 889 aaKnown RBP25.83■■□□□ 1.73
PRKCH-216ENST00000555542 CNR2P34972 360 aa25.83■■□□□ 1.73
PRKCH-216ENST00000555542 PPP1R2P41236 205 aa25.83■■□□□ 1.73
PRKCH-216ENST00000555542 SNX30Q5VWJ9 437 aa25.83■■□□□ 1.73
PRKCH-216ENST00000555542 CEP68Q76N32 757 aa25.83■■□□□ 1.73
PRKCH-216ENST00000555542 WHAMMQ8TF30 809 aa25.83■■□□□ 1.73
PRKCH-216ENST00000555542 FAXDC2Q96IV6 333 aa25.83■■□□□ 1.73
PRKCH-216ENST00000555542 CISHQ9NSE2 258 aa25.83■■□□□ 1.73
PRKCH-216ENST00000555542 E2F8A0AVK6 867 aa25.82■■□□□ 1.72
PRKCH-216ENST00000555542 FAM92AA1XBS5 289 aa25.82■■□□□ 1.72
PRKCH-216ENST00000555542 TLR5O60602 858 aa25.82■■□□□ 1.72
PRKCH-216ENST00000555542 ADH1CP00326 375 aa25.82■■□□□ 1.72
PRKCH-216ENST00000555542 ZDHHC11BP0C7U3 371 aa25.82■■□□□ 1.72
PRKCH-216ENST00000555542 ID4P47928 161 aa25.82■■□□□ 1.72
PRKCH-216ENST00000555542 SRSF5Q13243 272 aaKnown RBP25.82■■□□□ 1.72
PRKCH-216ENST00000555542 DHCR24Q15392 516 aa25.82■■□□□ 1.72
PRKCH-216ENST00000555542 CBWD6Q4V339 395 aa25.82■■□□□ 1.72
PRKCH-216ENST00000555542 CBWD3Q5JTY5 395 aa25.82■■□□□ 1.72
PRKCH-216ENST00000555542 CBWD5Q5RIA9 395 aa25.82■■□□□ 1.72
PRKCH-216ENST00000555542 KLHL10Q6JEL2 608 aa25.82■■□□□ 1.72
PRKCH-216ENST00000555542 GPRIN1Q7Z2K8 1008 aa25.82■■□□□ 1.72
PRKCH-216ENST00000555542 ADGRG2Q8IZP9 1017 aa25.82■■□□□ 1.72
PRKCH-216ENST00000555542 CCDC26Q8TAB7 109 aa25.82■■□□□ 1.72
PRKCH-216ENST00000555542 DHTKD1Q96HY7 919 aaPredicted RBP25.82■■□□□ 1.72
PRKCH-216ENST00000555542 CYP26A1O43174 497 aa25.81■■□□□ 1.72
PRKCH-216ENST00000555542 PXNP49023 591 aaPredicted RBP25.81■■□□□ 1.72
PRKCH-216ENST00000555542 MCCD1P59942 119 aaPredicted RBP25.81■■□□□ 1.72
PRKCH-216ENST00000555542 CCDC40Q4G0X9 1142 aa25.81■■□□□ 1.72
PRKCH-216ENST00000555542 PPP1R26Q5T8A7 1209 aaPredicted RBP25.81■■□□□ 1.72
PRKCH-216ENST00000555542 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.81■■□□□ 1.72
PRKCH-216ENST00000555542 ZC3H3Q8IXZ2 948 aaKnown RBP25.81■■□□□ 1.72
PRKCH-216ENST00000555542 ELOA2Q8IYF1 753 aaPredicted RBP25.81■■□□□ 1.72
PRKCH-216ENST00000555542 TATDN2Q93075 761 aa25.81■■□□□ 1.72
PRKCH-216ENST00000555542 ACDQ96AP0 544 aa25.81■■□□□ 1.72
PRKCH-216ENST00000555542 TMEM176AQ96HP8 235 aa25.81■■□□□ 1.72
PRKCH-216ENST00000555542 ARID3AQ99856 593 aa25.81■■□□□ 1.72
PRKCH-216ENST00000555542 PNPLA8Q9NP80 782 aa25.81■■□□□ 1.72
PRKCH-216ENST00000555542 SCML2Q9UQR0 700 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms