RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 CDK20Q8IZL9 346 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 RDM1Q8NG50 284 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 ACOX2Q99424 681 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 NEK6Q9HC98 313 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 RGS18Q9NS28 235 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 CHORDC1Q9UHD1 332 aaPredicted RBP7.1□□□□□ -1.27
SYNE2-216ENST00000555002 BMP10O95393 424 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 MAGEA9P43362 315 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 DMPKQ09013 629 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 SMU1Q2TAY7 513 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 TRPM8Q7Z2W7 1104 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 LINC00523Q86TU6 105 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 ATL2Q8NHH9 583 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 SSH3Q8TE77 659 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 LRRC39Q96DD0 335 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 DTNBP1Q96EV8 351 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 TBCDQ9BTW9 1192 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 MIR1-1HGQ9H1L0 117 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 SMARCAL1Q9NZC9 954 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 HERC5Q9UII4 1024 aaKnown RBP7.1□□□□□ -1.27
SYNE2-216ENST00000555002 TMA7Q9Y2S6 64 aaKnown RBP7.1□□□□□ -1.27
SYNE2-216ENST00000555002 FAM220BPB1ANY3 271 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.1□□□□□ -1.27
SYNE2-216ENST00000555002 S100GP29377 79 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 PTSQ03393 145 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 POM121L1PQ3SYA9 428 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 FGD3Q5JSP0 725 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 ARL6IP4Q66PJ3 421 aaKnown RBP7.1□□□□□ -1.27
SYNE2-216ENST00000555002 CYP20A1Q6UW02 462 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 IL17REQ8NFR9 667 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 FAM129BQ96TA1 746 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 FICDQ9BVA6 458 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 MXD3Q9BW11 206 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 CYLDQ9NQC7 956 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 CCL15-CCL14A0A0B4J2E2 113 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 C17orf102A2RUQ5 167 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 SAC3D1A6NKF1 404 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 B2RBV5 119 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 CBX4O00257 560 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 URODP06132 367 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 BCAP31P51572 246 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 SRP54P61011 504 aaKnown RBP7.1□□□□□ -1.27
SYNE2-216ENST00000555002 SCARF1Q14162 830 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 CCL15Q16663 113 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 PGBD2Q6P3X8 592 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 FAM220AQ7Z4H9 259 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 DSG4Q86SJ6 1040 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 TRIM63Q969Q1 353 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 OSBP2Q969R2 916 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 UNKQ9C0B0 810 aaKnown RBP7.1□□□□□ -1.27
SYNE2-216ENST00000555002 ZNF112Q9UJU3 913 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 CCNT2O60583 730 aaKnown RBP7.1□□□□□ -1.27
SYNE2-216ENST00000555002 MTA2O94776 668 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 TCEA1P23193 301 aaKnown RBP7.1□□□□□ -1.27
SYNE2-216ENST00000555002 LSP1P33241 339 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 SGSM1Q2NKQ1 1148 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 PDZK1Q5T2W1 519 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 OLFML2AQ68BL7 652 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 TRMT11Q7Z4G4 463 aaKnown RBP7.1□□□□□ -1.27
SYNE2-216ENST00000555002 CHPFQ8IZ52 775 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 ERP27Q96DN0 273 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 SEC16BQ96JE7 1060 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 ELOVL6Q9H5J4 265 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 TAF1DQ9H5J8 278 aaPredicted RBP7.1□□□□□ -1.27
SYNE2-216ENST00000555002 PSIP1O75475 530 aaKnown RBP7.1□□□□□ -1.27
SYNE2-216ENST00000555002 GPD1P21695 349 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 CHRNA5P30532 468 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 PFKFB3Q16875 520 aaPredicted RBP7.1□□□□□ -1.27
SYNE2-216ENST00000555002 IL17RAQ96F46 866 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 PNMA5Q96PV4 448 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 TINF2Q9BSI4 451 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 AMACRQ9UHK6 382 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 RBM7Q9Y580 266 aaKnown RBP7.1□□□□□ -1.27
SYNE2-216ENST00000555002 UTYO14607 1347 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 CCDC189A1A4V9 331 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 DCDC2CA8MYV0 355 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 AREL1O15033 823 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 ARL3P36405 182 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 CHRNB3Q05901 458 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 TAF5Q15542 800 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 GLRA4Q5JXX5 417 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 GPAT2Q6NUI2 795 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 KCNV1Q6PIU1 500 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 HPS6Q86YV9 775 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 LINC00301Q8NCQ3 95 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 HPS3Q969F9 1004 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 REXO5Q96IC2 774 aaKnown RBP7.1□□□□□ -1.27
SYNE2-216ENST00000555002 C9orf72Q96LT7 481 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 GPN3Q9UHW5 284 aaPredicted RBP7.1□□□□□ -1.27
SYNE2-216ENST00000555002 GMFGO60234 142 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 TRIM3O75382 744 aaPredicted RBP7.1□□□□□ -1.27
SYNE2-216ENST00000555002 KHDRBS3O75525 346 aaKnown RBP7.1□□□□□ -1.27
SYNE2-216ENST00000555002 ECDO95905 644 aaPredicted RBP7.1□□□□□ -1.27
SYNE2-216ENST00000555002 DSG1Q02413 1049 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 BIKQ13323 160 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 TXNRD1Q16881 649 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 PMF1Q6P1K2 205 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 TMC5Q6UXY8 1006 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 LDHDQ86WU2 507 aa7.1□□□□□ -1.27
SYNE2-216ENST00000555002 SLC4A9Q96Q91 983 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms