RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 Q4G0T1 1027 aa5.33□□□□□ -1.56
ATXN3-229ENST00000554672 FAM78AQ5JUQ0 283 aa5.33□□□□□ -1.56
ATXN3-229ENST00000554672 DGKKQ5KSL6 1271 aa5.33□□□□□ -1.56
ATXN3-229ENST00000554672 TTC22Q5TAA0 569 aa5.33□□□□□ -1.56
ATXN3-229ENST00000554672 HEATR6Q6AI08 1181 aaKnown RBP5.33□□□□□ -1.56
ATXN3-229ENST00000554672 APOA5Q6Q788 366 aa5.33□□□□□ -1.56
ATXN3-229ENST00000554672 B3GNT9Q6UX72 402 aa5.33□□□□□ -1.56
ATXN3-229ENST00000554672 OTUD6AQ7L8S5 288 aa5.33□□□□□ -1.56
ATXN3-229ENST00000554672 CACNA2D4Q7Z3S7 1137 aa5.33□□□□□ -1.56
ATXN3-229ENST00000554672 FERMT3Q86UX7 667 aa5.33□□□□□ -1.56
ATXN3-229ENST00000554672 WDR5BQ86VZ2 330 aa5.33□□□□□ -1.56
ATXN3-229ENST00000554672 PHACTR4Q8IZ21 702 aa5.33□□□□□ -1.56
ATXN3-229ENST00000554672 SYNPOQ8N3V7 929 aa5.33□□□□□ -1.56
ATXN3-229ENST00000554672 OXR1Q8N573 874 aa5.33□□□□□ -1.56
ATXN3-229ENST00000554672 RNF149Q8NC42 400 aa5.33□□□□□ -1.56
ATXN3-229ENST00000554672 ING5Q8WYH8 240 aa5.33□□□□□ -1.56
ATXN3-229ENST00000554672 RABGGTAQ92696 567 aa5.33□□□□□ -1.56
ATXN3-229ENST00000554672 TMEM143Q96AN5 459 aa5.33□□□□□ -1.56
ATXN3-229ENST00000554672 MSANTD3Q96H12 275 aa5.33□□□□□ -1.56
ATXN3-229ENST00000554672 CEP170P1Q96L14 293 aa5.33□□□□□ -1.56
ATXN3-229ENST00000554672 APOL6Q9BWW8 343 aa5.33□□□□□ -1.56
ATXN3-229ENST00000554672 LRRC2Q9BYS8 371 aa5.33□□□□□ -1.56
ATXN3-229ENST00000554672 DHX33Q9H6R0 707 aaKnown RBP5.33□□□□□ -1.56
ATXN3-229ENST00000554672 C8orf33Q9H7E9 229 aaPredicted RBP5.33□□□□□ -1.56
ATXN3-229ENST00000554672 BRMS1Q9HCU9 246 aa5.33□□□□□ -1.56
ATXN3-229ENST00000554672 RXFP3Q9NSD7 469 aa5.33□□□□□ -1.56
ATXN3-229ENST00000554672 HES2Q9Y543 173 aa5.33□□□□□ -1.56
ATXN3-229ENST00000554672 PCDHGA5Q9Y5G8 931 aa5.33□□□□□ -1.56
ATXN3-229ENST00000554672 PIAS3Q9Y6X2 628 aa5.33□□□□□ -1.56
ATXN3-229ENST00000554672 CFAP47Q6ZTR5 3102 aa5.33□□□□□ -1.56
ATXN3-229ENST00000554672 MAP1BP46821 2468 aaKnown RBP5.33□□□□□ -1.56
ATXN3-229ENST00000554672 BAHCC1Q9P281 2608 aa5.32□□□□□ -1.56
ATXN3-229ENST00000554672 CYP3A7-CYP3A51PA0A087WV96 503 aa5.32□□□□□ -1.56
ATXN3-229ENST00000554672 CCDC163A0A0D9SF12 145 aa5.32□□□□□ -1.56
ATXN3-229ENST00000554672 A0A1B0GUA9 196 aa5.32□□□□□ -1.56
ATXN3-229ENST00000554672 ARHGEF37A1IGU5 675 aa5.32□□□□□ -1.56
ATXN3-229ENST00000554672 SRRM3A6NNA2 597 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-229ENST00000554672 GOLGA8AA7E2F4 631 aa5.32□□□□□ -1.56
ATXN3-229ENST00000554672 GOLGA8BA8MQT2 603 aa5.32□□□□□ -1.56
ATXN3-229ENST00000554672 INO80B-WBP1J3KQ70 363 aa5.32□□□□□ -1.56
ATXN3-229ENST00000554672 ADAMTS3O15072 1205 aa5.32□□□□□ -1.56
ATXN3-229ENST00000554672 PRPF3O43395 683 aaKnown RBP5.32□□□□□ -1.56
ATXN3-229ENST00000554672 EPN2O95208 641 aa5.32□□□□□ -1.56
ATXN3-229ENST00000554672 ATE1O95260 518 aa5.32□□□□□ -1.56
ATXN3-229ENST00000554672 LRG1P02750 347 aa5.32□□□□□ -1.56
ATXN3-229ENST00000554672 GSPT1P15170 499 aaKnown RBP5.32□□□□□ -1.56
ATXN3-229ENST00000554672 FCARP24071 287 aa5.32□□□□□ -1.56
ATXN3-229ENST00000554672 CYP3A7P24462 503 aa5.32□□□□□ -1.56
ATXN3-229ENST00000554672 AKAP5P24588 427 aa5.32□□□□□ -1.56
ATXN3-229ENST00000554672 CCNE1P24864 410 aa5.32□□□□□ -1.56
ATXN3-229ENST00000554672 ELF1P32519 619 aa5.32□□□□□ -1.56
ATXN3-229ENST00000554672 QARSP47897 775 aaKnown RBP5.32□□□□□ -1.56
ATXN3-229ENST00000554672 NOVA1P51513 510 aaKnown RBP5.32□□□□□ -1.56
ATXN3-229ENST00000554672 RCAN1P53805 252 aa5.32□□□□□ -1.56
ATXN3-229ENST00000554672 NPEPPSP55786 919 aa5.32□□□□□ -1.56
ATXN3-229ENST00000554672 EXOSC10Q01780 885 aaKnown RBP5.32□□□□□ -1.56
ATXN3-229ENST00000554672 TUSC3Q13454 348 aa5.32□□□□□ -1.56
ATXN3-229ENST00000554672 TFDP1Q14186 410 aa5.32□□□□□ -1.56
ATXN3-229ENST00000554672 MXD4Q14582 209 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-229ENST00000554672 NECTIN1Q15223 517 aa5.32□□□□□ -1.56
ATXN3-229ENST00000554672 SLC5A9Q2M3M2 681 aa5.32□□□□□ -1.56
ATXN3-229ENST00000554672 ARSHQ5FYA8 562 aa5.32□□□□□ -1.56
ATXN3-229ENST00000554672 CYP4A22Q5TCH4 519 aa5.32□□□□□ -1.56
ATXN3-229ENST00000554672 DAB2IPQ5VWQ8 1189 aa5.32□□□□□ -1.56
ATXN3-229ENST00000554672 CREB3L3Q68CJ9 461 aa5.32□□□□□ -1.56
ATXN3-229ENST00000554672 PLA2G4FQ68DD2 849 aa5.32□□□□□ -1.56
ATXN3-229ENST00000554672 IRF2BP1Q8IU81 584 aa5.32□□□□□ -1.56
ATXN3-229ENST00000554672 MFSD6LQ8IWD5 586 aa5.32□□□□□ -1.56
ATXN3-229ENST00000554672 ZNF461Q8TAF7 563 aa5.32□□□□□ -1.56
ATXN3-229ENST00000554672 CSGALNACT1Q8TDX6 532 aa5.32□□□□□ -1.56
ATXN3-229ENST00000554672 DEPDC1BQ8WUY9 529 aa5.32□□□□□ -1.56
ATXN3-229ENST00000554672 SMARCD2Q92925 531 aa5.32□□□□□ -1.56
ATXN3-229ENST00000554672 GJA10Q969M2 543 aa5.32□□□□□ -1.56
ATXN3-229ENST00000554672 E2F7Q96AV8 911 aa5.32□□□□□ -1.56
ATXN3-229ENST00000554672 CPB2Q96IY4 423 aa5.32□□□□□ -1.56
ATXN3-229ENST00000554672 HDAC8Q9BY41 377 aa5.32□□□□□ -1.56
ATXN3-229ENST00000554672 LRRC3Q9BY71 257 aa5.32□□□□□ -1.56
ATXN3-229ENST00000554672 C22orf23Q9BZE7 217 aa5.32□□□□□ -1.56
ATXN3-229ENST00000554672 GPR88Q9GZN0 384 aa5.32□□□□□ -1.56
ATXN3-229ENST00000554672 VPS45Q9NRW7 570 aa5.32□□□□□ -1.56
ATXN3-229ENST00000554672 MTRRQ9UBK8 725 aa5.32□□□□□ -1.56
ATXN3-229ENST00000554672 BACE2Q9Y5Z0 518 aa5.32□□□□□ -1.56
ATXN3-229ENST00000554672 CHD6Q8TD26 2715 aa5.32□□□□□ -1.56
ATXN3-229ENST00000554672 ZMYM2Q9UBW7 1377 aa5.31□□□□□ -1.56
ATXN3-229ENST00000554672 DOCK5Q9H7D0 1870 aa5.31□□□□□ -1.56
ATXN3-229ENST00000554672 WDR27A2RRH5 827 aa5.31□□□□□ -1.56
ATXN3-229ENST00000554672 CASTOR2A6NHX0 329 aa5.31□□□□□ -1.56
ATXN3-229ENST00000554672 PRRG1O14668 218 aa5.31□□□□□ -1.56
ATXN3-229ENST00000554672 TRAPPC3O43617 180 aa5.31□□□□□ -1.56
ATXN3-229ENST00000554672 RPP40O75818 363 aaKnown RBP5.31□□□□□ -1.56
ATXN3-229ENST00000554672 AKAP3O75969 853 aa5.31□□□□□ -1.56
ATXN3-229ENST00000554672 ABLIM3O94929 683 aa5.31□□□□□ -1.56
ATXN3-229ENST00000554672 THP07101 528 aa5.31□□□□□ -1.56
ATXN3-229ENST00000554672 CEACAM1P13688 526 aa5.31□□□□□ -1.56
ATXN3-229ENST00000554672 CEBPBP17676 345 aa5.31□□□□□ -1.56
ATXN3-229ENST00000554672 ARF4P18085 180 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-229ENST00000554672 YWHABP31946 246 aaKnown RBP5.31□□□□□ -1.56
ATXN3-229ENST00000554672 GBP1P32455 592 aa5.31□□□□□ -1.56
ATXN3-229ENST00000554672 EIF4A3P38919 411 aaKnown RBP5.31□□□□□ -1.56
ATXN3-229ENST00000554672 VIPR2P41587 438 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms