RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 HNRNPABQ99729 332 aaKnown RBP7.98□□□□□ -1.13
LINC00640-201ENST00000554409 SMOQ99835 787 aa7.98□□□□□ -1.13
LINC00640-201ENST00000554409 IER2Q9BTL4 223 aa7.98□□□□□ -1.13
LINC00640-201ENST00000554409 MED10Q9BTT4 135 aa7.98□□□□□ -1.13
LINC00640-201ENST00000554409 TRPC7Q9HCX4 862 aa7.98□□□□□ -1.13
LINC00640-201ENST00000554409 PNPLA8Q9NP80 782 aa7.98□□□□□ -1.13
LINC00640-201ENST00000554409 ARHGAP26Q9UNA1 814 aa7.98□□□□□ -1.13
LINC00640-201ENST00000554409 CTNND2Q9UQB3 1225 aa7.98□□□□□ -1.13
LINC00640-201ENST00000554409 KIAA1549LQ6ZVL6 1849 aa7.98□□□□□ -1.13
LINC00640-201ENST00000554409 C2orf78A6NCI8 922 aa7.97□□□□□ -1.13
LINC00640-201ENST00000554409 SPECC1L-ADORA2AF8WAN1 911 aa7.97□□□□□ -1.13
LINC00640-201ENST00000554409 BIN1O00499 593 aa7.97□□□□□ -1.13
LINC00640-201ENST00000554409 P4HA2O15460 535 aa7.97□□□□□ -1.13
LINC00640-201ENST00000554409 AP1G2O75843 785 aa7.97□□□□□ -1.13
LINC00640-201ENST00000554409 BEST1O76090 585 aa7.97□□□□□ -1.13
LINC00640-201ENST00000554409 CKMP06732 381 aa7.97□□□□□ -1.13
LINC00640-201ENST00000554409 ZDHHC11BP0C7U3 371 aa7.97□□□□□ -1.13
LINC00640-201ENST00000554409 FAM200BP0CF97 657 aa7.97□□□□□ -1.13
LINC00640-201ENST00000554409 HDCP19113 662 aa7.97□□□□□ -1.13
LINC00640-201ENST00000554409 CTHP32929 405 aa7.97□□□□□ -1.13
LINC00640-201ENST00000554409 FMO5P49326 533 aa7.97□□□□□ -1.13
LINC00640-201ENST00000554409 MRE11P49959 708 aa7.97□□□□□ -1.13
LINC00640-201ENST00000554409 TUBP50607 506 aa7.97□□□□□ -1.13
LINC00640-201ENST00000554409 SLC7A9P82251 487 aa7.97□□□□□ -1.13
LINC00640-201ENST00000554409 TAF10Q12962 218 aa7.97□□□□□ -1.13
LINC00640-201ENST00000554409 PAK1Q13153 545 aa7.97□□□□□ -1.13
LINC00640-201ENST00000554409 ORC1Q13415 861 aa7.97□□□□□ -1.13
LINC00640-201ENST00000554409 MTF1Q14872 753 aa7.97□□□□□ -1.13
LINC00640-201ENST00000554409 PDGFRLQ15198 375 aa7.97□□□□□ -1.13
LINC00640-201ENST00000554409 ITPRIPL2Q3MIP1 535 aa7.97□□□□□ -1.13
LINC00640-201ENST00000554409 ZNF528Q3MIS6 628 aa7.97□□□□□ -1.13
LINC00640-201ENST00000554409 CCDC40Q4G0X9 1142 aa7.97□□□□□ -1.13
LINC00640-201ENST00000554409 WDR44Q5JSH3 913 aa7.97□□□□□ -1.13
LINC00640-201ENST00000554409 CC2D1AQ6P1N0 951 aaPredicted RBP7.97□□□□□ -1.13
LINC00640-201ENST00000554409 CLEC20AQ6ZU45 233 aa7.97□□□□□ -1.13
LINC00640-201ENST00000554409 GPIHBP1Q8IV16 184 aa7.97□□□□□ -1.13
LINC00640-201ENST00000554409 C1orf210Q8IVY1 113 aa7.97□□□□□ -1.13
LINC00640-201ENST00000554409 TRIM59Q8IWR1 403 aa7.97□□□□□ -1.13
LINC00640-201ENST00000554409 ARL14EPQ8N8R7 260 aaPredicted RBP7.97□□□□□ -1.13
LINC00640-201ENST00000554409 C12orf29Q8N999 325 aa7.97□□□□□ -1.13
LINC00640-201ENST00000554409 RIN3Q8TB24 985 aa7.97□□□□□ -1.13
LINC00640-201ENST00000554409 OSCP1Q8WVF1 389 aa7.97□□□□□ -1.13
LINC00640-201ENST00000554409 CYFIP2Q96F07 1278 aa7.97□□□□□ -1.13
LINC00640-201ENST00000554409 ZFYVE19Q96K21 471 aa7.97□□□□□ -1.13
LINC00640-201ENST00000554409 ZFRQ96KR1 1074 aaKnown RBP7.97□□□□□ -1.13
LINC00640-201ENST00000554409 CYP2S1Q96SQ9 504 aa7.97□□□□□ -1.13
LINC00640-201ENST00000554409 PHOX2BQ99453 314 aa7.97□□□□□ -1.13
LINC00640-201ENST00000554409 CHRDQ9H2X0 955 aa7.97□□□□□ -1.13
LINC00640-201ENST00000554409 CLSTN2Q9H4D0 955 aa7.97□□□□□ -1.13
LINC00640-201ENST00000554409 FBXO44Q9H4M3 255 aa7.97□□□□□ -1.13
LINC00640-201ENST00000554409 HPS4Q9NQG7 708 aa7.97□□□□□ -1.13
LINC00640-201ENST00000554409 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.97□□□□□ -1.13
LINC00640-201ENST00000554409 GKN1Q9NS71 199 aa7.97□□□□□ -1.13
LINC00640-201ENST00000554409 CISHQ9NSE2 258 aa7.97□□□□□ -1.13
LINC00640-201ENST00000554409 FAM49BQ9NUQ9 324 aa7.97□□□□□ -1.13
LINC00640-201ENST00000554409 GTSE1Q9NYZ3 720 aa7.97□□□□□ -1.13
LINC00640-201ENST00000554409 FBXO4Q9UKT5 387 aa7.97□□□□□ -1.13
LINC00640-201ENST00000554409 HHLA1C9JL84 531 aa7.96□□□□□ -1.14
LINC00640-201ENST00000554409 CHRNB1P11230 501 aa7.96□□□□□ -1.14
LINC00640-201ENST00000554409 CD58P19256 250 aa7.96□□□□□ -1.14
LINC00640-201ENST00000554409 TBXAS1P24557 533 aaPredicted RBP7.96□□□□□ -1.14
LINC00640-201ENST00000554409 ADORA2BP29275 332 aa7.96□□□□□ -1.14
LINC00640-201ENST00000554409 SOX9P48436 509 aa7.96□□□□□ -1.14
LINC00640-201ENST00000554409 KPNA1P52294 538 aaPredicted RBP7.96□□□□□ -1.14
LINC00640-201ENST00000554409 RAD23BP54727 409 aa7.96□□□□□ -1.14
LINC00640-201ENST00000554409 MAP3K7CLP57077 242 aa7.96□□□□□ -1.14
LINC00640-201ENST00000554409 YWHAEP62258 255 aaKnown RBP7.96□□□□□ -1.14
LINC00640-201ENST00000554409 ZXDBP98169 803 aa7.96□□□□□ -1.14
LINC00640-201ENST00000554409 TNK2Q07912 1038 aa7.96□□□□□ -1.14
LINC00640-201ENST00000554409 CUL2Q13617 745 aa7.96□□□□□ -1.14
LINC00640-201ENST00000554409 RUNX3Q13761 415 aa7.96□□□□□ -1.14
LINC00640-201ENST00000554409 CAMK4Q16566 473 aa7.96□□□□□ -1.14
LINC00640-201ENST00000554409 DGKKQ5KSL6 1271 aa7.96□□□□□ -1.14
LINC00640-201ENST00000554409 ARHGAP17Q68EM7 881 aa7.96□□□□□ -1.14
LINC00640-201ENST00000554409 KLHL10Q6JEL2 608 aa7.96□□□□□ -1.14
LINC00640-201ENST00000554409 NUDT18Q6ZVK8 323 aa7.96□□□□□ -1.14
LINC00640-201ENST00000554409 MAML2Q8IZL2 1156 aaPredicted RBP7.96□□□□□ -1.14
LINC00640-201ENST00000554409 SYNPOQ8N3V7 929 aa7.96□□□□□ -1.14
LINC00640-201ENST00000554409 UBR7Q8N806 425 aa7.96□□□□□ -1.14
LINC00640-201ENST00000554409 SLC4A11Q8NBS3 891 aa7.96□□□□□ -1.14
LINC00640-201ENST00000554409 SH3RF2Q8TEC5 729 aa7.96□□□□□ -1.14
LINC00640-201ENST00000554409 ATP2A3Q93084 1043 aa7.96□□□□□ -1.14
LINC00640-201ENST00000554409 FBXO32Q969P5 355 aa7.96□□□□□ -1.14
LINC00640-201ENST00000554409 TMEM176AQ96HP8 235 aa7.96□□□□□ -1.14
LINC00640-201ENST00000554409 ARID3AQ99856 593 aa7.96□□□□□ -1.14
LINC00640-201ENST00000554409 RNF38Q9H0F5 515 aa7.96□□□□□ -1.14
LINC00640-201ENST00000554409 PRMT8Q9NR22 394 aaPredicted RBP7.96□□□□□ -1.14
LINC00640-201ENST00000554409 FAM86C1Q9NVL1 165 aa7.96□□□□□ -1.14
LINC00640-201ENST00000554409 RWDD2AQ9UIY3 292 aa7.96□□□□□ -1.14
LINC00640-201ENST00000554409 NDRG2Q9UN36 371 aaKnown RBP7.96□□□□□ -1.14
LINC00640-201ENST00000554409 OTOL1A6NHN0 477 aaPredicted RBP7.95□□□□□ -1.14
LINC00640-201ENST00000554409 SMAPO00193 183 aa7.95□□□□□ -1.14
LINC00640-201ENST00000554409 LEFTY2O00292 366 aa7.95□□□□□ -1.14
LINC00640-201ENST00000554409 TRDMT1O14717 391 aaKnown RBP7.95□□□□□ -1.14
LINC00640-201ENST00000554409 LAMTOR5O43504 91 aa7.95□□□□□ -1.14
LINC00640-201ENST00000554409 FGFR1OPO95684 399 aaKnown RBP7.95□□□□□ -1.14
LINC00640-201ENST00000554409 SP9P0CG40 484 aa7.95□□□□□ -1.14
LINC00640-201ENST00000554409 CCDC192P0DO97 292 aa7.95□□□□□ -1.14
LINC00640-201ENST00000554409 MBL2P11226 248 aaPredicted RBP7.95□□□□□ -1.14
LINC00640-201ENST00000554409 ARSAP15289 507 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms