RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 UBA7P41226 1012 aa18.09■□□□□ 0.49
NEK9-204ENST00000554258 TNFRSF4P43489 277 aa18.09■□□□□ 0.49
NEK9-204ENST00000554258 SLC10A6Q3KNW5 377 aa18.09■□□□□ 0.49
NEK9-204ENST00000554258 PKDCCQ504Y2 493 aa18.09■□□□□ 0.49
NEK9-204ENST00000554258 ZC2HC1CQ53FD0 456 aaPredicted RBP18.09■□□□□ 0.49
NEK9-204ENST00000554258 TRMT11Q7Z4G4 463 aaKnown RBP18.09■□□□□ 0.49
NEK9-204ENST00000554258 SNX29Q8TEQ0 813 aa18.09■□□□□ 0.49
NEK9-204ENST00000554258 TMEM176AQ96HP8 235 aa18.09■□□□□ 0.49
NEK9-204ENST00000554258 ZCWPW1Q9H0M4 648 aa18.09■□□□□ 0.49
NEK9-204ENST00000554258 UXTQ9UBK9 157 aaPredicted RBP18.09■□□□□ 0.49
NEK9-204ENST00000554258 TADA3O75528 432 aa18.08■□□□□ 0.48
NEK9-204ENST00000554258 CSH1P0DML2 217 aa18.08■□□□□ 0.48
NEK9-204ENST00000554258 CSH2P0DML3 217 aa18.08■□□□□ 0.48
NEK9-204ENST00000554258 HOXB2P14652 356 aa18.08■□□□□ 0.48
NEK9-204ENST00000554258 CYP11B2P19099 503 aa18.08■□□□□ 0.48
NEK9-204ENST00000554258 EIF2DP41214 584 aaKnown RBP18.08■□□□□ 0.48
NEK9-204ENST00000554258 GRIA2P42262 883 aa18.08■□□□□ 0.48
NEK9-204ENST00000554258 SPAG1Q07617 926 aa18.08■□□□□ 0.48
NEK9-204ENST00000554258 RTP5Q14D33 572 aa18.08■□□□□ 0.48
NEK9-204ENST00000554258 TMEM119Q4V9L6 283 aa18.08■□□□□ 0.48
NEK9-204ENST00000554258 ARHGAP40Q5TG30 622 aa18.08■□□□□ 0.48
NEK9-204ENST00000554258 PADI6Q6TGC4 694 aa18.08■□□□□ 0.48
NEK9-204ENST00000554258 ZNF513Q8N8E2 541 aaPredicted RBP18.08■□□□□ 0.48
NEK9-204ENST00000554258 ARL14EPQ8N8R7 260 aaPredicted RBP18.08■□□□□ 0.48
NEK9-204ENST00000554258 SPIRE2Q8WWL2 714 aa18.08■□□□□ 0.48
NEK9-204ENST00000554258 MED8Q96G25 268 aa18.08■□□□□ 0.48
NEK9-204ENST00000554258 SENP8Q96LD8 212 aa18.08■□□□□ 0.48
NEK9-204ENST00000554258 MRPL4Q9BYD3 311 aaKnown RBP18.08■□□□□ 0.48
NEK9-204ENST00000554258 NRSN2Q9GZP1 204 aa18.08■□□□□ 0.48
NEK9-204ENST00000554258 HPSEQ9Y251 543 aa18.08■□□□□ 0.48
NEK9-204ENST00000554258 A0A0A0MRY4 1105 aa18.07■□□□□ 0.48
NEK9-204ENST00000554258 NDUFV2P19404 249 aa18.07■□□□□ 0.48
NEK9-204ENST00000554258 ADSSP30520 456 aa18.07■□□□□ 0.48
NEK9-204ENST00000554258 GRK6P43250 576 aa18.07■□□□□ 0.48
NEK9-204ENST00000554258 CLDN6P56747 220 aa18.07■□□□□ 0.48
NEK9-204ENST00000554258 TMPRSS3P57727 454 aa18.07■□□□□ 0.48
NEK9-204ENST00000554258 KCNB1Q14721 858 aa18.07■□□□□ 0.48
NEK9-204ENST00000554258 DNASE2BQ8WZ79 361 aa18.07■□□□□ 0.48
NEK9-204ENST00000554258 DRC1Q96MC2 740 aa18.07■□□□□ 0.48
NEK9-204ENST00000554258 GBP4Q96PP9 640 aa18.07■□□□□ 0.48
NEK9-204ENST00000554258 LGMNQ99538 433 aa18.07■□□□□ 0.48
NEK9-204ENST00000554258 TARS2Q9BW92 718 aaKnown RBP18.07■□□□□ 0.48
NEK9-204ENST00000554258 POLD4Q9HCU8 107 aa18.07■□□□□ 0.48
NEK9-204ENST00000554258 GMIPQ9P107 970 aa18.07■□□□□ 0.48
NEK9-204ENST00000554258 PHLPP2Q6ZVD8 1323 aa18.06■□□□□ 0.48
NEK9-204ENST00000554258 NBPF19A0A087WUL8 3843 aa18.06■□□□□ 0.48
NEK9-204ENST00000554258 TCF3P15923 654 aa18.06■□□□□ 0.48
NEK9-204ENST00000554258 ACTN2P35609 894 aa18.06■□□□□ 0.48
NEK9-204ENST00000554258 WASP42768 502 aa18.06■□□□□ 0.48
NEK9-204ENST00000554258 GPR15P49685 360 aa18.06■□□□□ 0.48
NEK9-204ENST00000554258 BNC1Q01954 994 aa18.06■□□□□ 0.48
NEK9-204ENST00000554258 SMARCB1Q12824 385 aa18.06■□□□□ 0.48
NEK9-204ENST00000554258 DHCR24Q15392 516 aa18.06■□□□□ 0.48
NEK9-204ENST00000554258 SEZ6Q53EL9 994 aa18.06■□□□□ 0.48
NEK9-204ENST00000554258 BROXQ5VW32 411 aa18.06■□□□□ 0.48
NEK9-204ENST00000554258 MPZL3Q6UWV2 235 aa18.06■□□□□ 0.48
NEK9-204ENST00000554258 C12orf40Q86WS4 652 aa18.06■□□□□ 0.48
NEK9-204ENST00000554258 CALML4Q96GE6 196 aa18.06■□□□□ 0.48
NEK9-204ENST00000554258 CPNE5Q9HCH3 593 aa18.06■□□□□ 0.48
NEK9-204ENST00000554258 CD93Q9NPY3 652 aa18.06■□□□□ 0.48
NEK9-204ENST00000554258 GCNT4Q9P109 453 aa18.06■□□□□ 0.48
NEK9-204ENST00000554258 ANKMY1Q9P2S6 941 aa18.06■□□□□ 0.48
NEK9-204ENST00000554258 ARHGAP26Q9UNA1 814 aa18.06■□□□□ 0.48
NEK9-204ENST00000554258 KIAA1024Q9UPX6 916 aa18.06■□□□□ 0.48
NEK9-204ENST00000554258 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.06■□□□□ 0.48
NEK9-204ENST00000554258 HEMK1Q9Y5R4 338 aaPredicted RBP18.06■□□□□ 0.48
NEK9-204ENST00000554258 A0A087X0B3 334 aa18.05■□□□□ 0.48
NEK9-204ENST00000554258 ARHGEF35A5YM69 484 aa18.05■□□□□ 0.48
NEK9-204ENST00000554258 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.05■□□□□ 0.48
NEK9-204ENST00000554258 BCAT2O15382 392 aaPredicted RBP18.05■□□□□ 0.48
NEK9-204ENST00000554258 KRT10P13645 584 aa18.05■□□□□ 0.48
NEK9-204ENST00000554258 TARDBPQ13148 414 aaKnown RBP eCLIP18.05■□□□□ 0.48
NEK9-204ENST00000554258 SDHAF4Q5VUM1 108 aa18.05■□□□□ 0.48
NEK9-204ENST00000554258 KCNK18Q7Z418 384 aa18.05■□□□□ 0.48
NEK9-204ENST00000554258 FILIP1Q7Z7B0 1213 aa18.05■□□□□ 0.48
NEK9-204ENST00000554258 KCNV2Q8TDN2 545 aa18.05■□□□□ 0.48
NEK9-204ENST00000554258 LRRC15Q8TF66 581 aa18.05■□□□□ 0.48
NEK9-204ENST00000554258 ERLEC1Q96DZ1 483 aa18.05■□□□□ 0.48
NEK9-204ENST00000554258 BLOC1S4Q9NUP1 217 aa18.05■□□□□ 0.48
NEK9-204ENST00000554258 FAM13BQ9NYF5 915 aa18.05■□□□□ 0.48
NEK9-204ENST00000554258 FTSJ1Q9UET6 329 aa18.05■□□□□ 0.48
NEK9-204ENST00000554258 CCDC39Q9UFE4 941 aa18.05■□□□□ 0.48
NEK9-204ENST00000554258 UBQLN1Q9UMX0 589 aaKnown RBP18.05■□□□□ 0.48
NEK9-204ENST00000554258 NFE2L3Q9Y4A8 694 aa18.05■□□□□ 0.48
NEK9-204ENST00000554258 USP9YO00507 2555 aaPredicted RBP18.04■□□□□ 0.48
NEK9-204ENST00000554258 A0A1W2PQF6 199 aa18.04■□□□□ 0.48
NEK9-204ENST00000554258 TBC1D3BA6NDS4 549 aa18.04■□□□□ 0.48
NEK9-204ENST00000554258 ABLIM1O14639 778 aa18.04■□□□□ 0.48
NEK9-204ENST00000554258 BRINP1O60477 761 aa18.04■□□□□ 0.48
NEK9-204ENST00000554258 GADD45BO75293 160 aaPredicted RBP18.04■□□□□ 0.48
NEK9-204ENST00000554258 CXCL8P10145 99 aa18.04■□□□□ 0.48
NEK9-204ENST00000554258 HDCP19113 662 aa18.04■□□□□ 0.48
NEK9-204ENST00000554258 PROZP22891 400 aa18.04■□□□□ 0.48
NEK9-204ENST00000554258 TXLNAP40222 546 aa18.04■□□□□ 0.48
NEK9-204ENST00000554258 GUCY2FP51841 1108 aa18.04■□□□□ 0.48
NEK9-204ENST00000554258 UCNP55089 124 aa18.04■□□□□ 0.48
NEK9-204ENST00000554258 LILRA4P59901 499 aa18.04■□□□□ 0.48
NEK9-204ENST00000554258 E2F4Q16254 413 aa18.04■□□□□ 0.48
NEK9-204ENST00000554258 LRRTM3Q86VH5 581 aa18.04■□□□□ 0.48
NEK9-204ENST00000554258 ADGRG2Q8IZP9 1017 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms