RNA–Protein interactions for RNA: ENST00000552627.1

SMARCC2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 409 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-213ENST00000552627 FTHL17Q9BXU8 183 aa6.11□□□□□ -1.43
SMARCC2-213ENST00000552627 EIF2AQ9BY44 585 aaKnown RBP6.11□□□□□ -1.43
SMARCC2-213ENST00000552627 NT5C3AQ9H0P0 336 aa6.11□□□□□ -1.43
SMARCC2-213ENST00000552627 ZHX3Q9H4I2 956 aa6.11□□□□□ -1.43
SMARCC2-213ENST00000552627 PRDM12Q9H4Q4 367 aa6.11□□□□□ -1.43
SMARCC2-213ENST00000552627 SLC28A3Q9HAS3 691 aa6.11□□□□□ -1.43
SMARCC2-213ENST00000552627 AGPAT5Q9NUQ2 364 aa6.11□□□□□ -1.43
SMARCC2-213ENST00000552627 CLEC1BQ9P126 229 aa6.11□□□□□ -1.43
SMARCC2-213ENST00000552627 CNOT6Q9ULM6 557 aaKnown RBP6.11□□□□□ -1.43
SMARCC2-213ENST00000552627 PCDHA7Q9UN72 937 aa6.11□□□□□ -1.43
SMARCC2-213ENST00000552627 RALGAPA2Q2PPJ7 1873 aa6.11□□□□□ -1.43
SMARCC2-213ENST00000552627 CDH23Q9H251 3354 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 UQCRHLA0A096LP55 91 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 MYMKA6NI61 221 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 CCDC169A6NNP5 214 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 TBKBP1A7MCY6 615 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 N4BP3O15049 544 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 SLC16A4O15374 487 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 ASAP2O43150 1006 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 NUAK1O60285 661 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 NPHS1O60500 1241 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 CUTAO60888 179 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 DGKIO75912 1065 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 ERLIN2O94905 339 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 PRKCBP05771 671 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 KRT18P05783 430 aaKnown RBP6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 UQCRHP07919 91 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 DBHP09172 617 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 ZSCAN20P17040 1043 aaPredicted RBP6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 ATF7P17544 494 aaPredicted RBP6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 ARF4P18085 180 aaPredicted RBP6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 CASP1P29466 404 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 GTF2F1P35269 517 aaKnown RBP eCLIP6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 NAMPTP43490 491 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 NPTX2P47972 431 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 SARSP49591 514 aaKnown RBP6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 EPHB3P54753 998 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 KRT85P78386 507 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 HTRA4P83105 476 aaPredicted RBP6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 BTG3Q14201 252 aaPredicted RBP6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 KLHL40Q2TBA0 621 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 KRTAP19-4Q3LI73 84 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 CLLU1OSQ5K130 101 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 CDCA2Q69YH5 1023 aaPredicted RBP6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 MRM1Q6IN84 353 aaKnown RBP6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 ZC3H14Q6PJT7 736 aaKnown RBP6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 SLC24A5Q71RS6 500 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 SRGAP1Q7Z6B7 1085 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 ZNF227Q86WZ6 799 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 ECHDC2Q86YB7 292 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 C1QL4Q86Z23 238 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 CREBRFQ8IUR6 639 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 LZTR1Q8N653 840 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 KCNG4Q8TDN1 519 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 GDPD5Q8WTR4 605 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 BTN2A2Q8WVV5 523 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 LARP4BQ92615 738 aaKnown RBP6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 KIFAP3Q92845 792 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 IFT74Q96LB3 600 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 CDX2Q99626 313 aaPredicted RBP6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 RAD9AQ99638 391 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 APOL6Q9BWW8 343 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 CCSER1Q9C0I3 900 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 CCDC113Q9H0I3 377 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 EPN3Q9H201 632 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 IKZF4Q9H2S9 585 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 ST7Q9NRC1 585 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 C1orf112Q9NSG2 853 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 MTMR10Q9NXD2 777 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 RCOR1Q9UKL0 485 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 CFAP45Q9UL16 551 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 HES2Q9Y543 173 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 PCDHB7Q9Y5E2 793 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 MRPL42Q9Y6G3 142 aaKnown RBP6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 PLXNA4Q9HCM2 1894 aa6.1□□□□□ -1.43
SMARCC2-213ENST00000552627 CHD7Q9P2D1 2997 aa6.09□□□□□ -1.43
SMARCC2-213ENST00000552627 TRANK1O15050 2925 aa6.09□□□□□ -1.43
SMARCC2-213ENST00000552627 CNTNAP2Q9UHC6 1331 aa6.09□□□□□ -1.43
SMARCC2-213ENST00000552627 A0A1B0GVL5 298 aa6.09□□□□□ -1.43
SMARCC2-213ENST00000552627 C7orf72A4D263 438 aa6.09□□□□□ -1.43
SMARCC2-213ENST00000552627 TBX1O43435 398 aa6.09□□□□□ -1.43
SMARCC2-213ENST00000552627 SLC26A4O43511 780 aa6.09□□□□□ -1.43
SMARCC2-213ENST00000552627 NPTXRO95502 500 aa6.09□□□□□ -1.43
SMARCC2-213ENST00000552627 THBDP07204 575 aa6.09□□□□□ -1.43
SMARCC2-213ENST00000552627 LINC00271P0C7V0 271 aa6.09□□□□□ -1.43
SMARCC2-213ENST00000552627 NMT1P30419 496 aaKnown RBP6.09□□□□□ -1.43
SMARCC2-213ENST00000552627 HOXC12P31275 282 aa6.09□□□□□ -1.43
SMARCC2-213ENST00000552627 CTNNB1P35222 781 aa6.09□□□□□ -1.43
SMARCC2-213ENST00000552627 PBX3P40426 434 aa6.09□□□□□ -1.43
SMARCC2-213ENST00000552627 CDR1P51861 262 aa6.09□□□□□ -1.43
SMARCC2-213ENST00000552627 FAM189BP81408 668 aa6.09□□□□□ -1.43
SMARCC2-213ENST00000552627 CDC42EP1Q00587 391 aa6.09□□□□□ -1.43
SMARCC2-213ENST00000552627 DMP1Q13316 513 aaPredicted RBP6.09□□□□□ -1.43
SMARCC2-213ENST00000552627 PRPF4BQ13523 1007 aaKnown RBP6.09□□□□□ -1.43
SMARCC2-213ENST00000552627 GIT2Q14161 759 aa6.09□□□□□ -1.43
SMARCC2-213ENST00000552627 PLEKHN1Q494U1 663 aaPredicted RBP6.09□□□□□ -1.43
SMARCC2-213ENST00000552627 ZNF385BQ569K4 471 aa6.09□□□□□ -1.43
SMARCC2-213ENST00000552627 ODR4Q5SWX8 454 aa6.09□□□□□ -1.43
SMARCC2-213ENST00000552627 NT5DC1Q5TFE4 455 aa6.09□□□□□ -1.43
SMARCC2-213ENST00000552627 RESP18Q5W5W9 173 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms