RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 TAS2R42Q7RTR8 314 aa11.21□□□□□ -0.62
TGFBR1-209ENST00000552516 SPOCK2Q92563 424 aa11.21□□□□□ -0.62
TGFBR1-209ENST00000552516 ULBP1Q9BZM6 244 aa11.21□□□□□ -0.62
TGFBR1-209ENST00000552516 IL1RL2Q9HB29 575 aa11.21□□□□□ -0.62
TGFBR1-209ENST00000552516 CDHR5Q9HBB8 845 aa11.21□□□□□ -0.62
TGFBR1-209ENST00000552516 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.21□□□□□ -0.62
TGFBR1-209ENST00000552516 PCDHA3Q9Y5H8 950 aa11.21□□□□□ -0.62
TGFBR1-209ENST00000552516 V9GYQ6 96 aa11.21□□□□□ -0.62
TGFBR1-209ENST00000552516 ASAP2O43150 1006 aa11.21□□□□□ -0.62
TGFBR1-209ENST00000552516 TGFB3P10600 412 aa11.21□□□□□ -0.62
TGFBR1-209ENST00000552516 NCKAP1LP55160 1127 aa11.21□□□□□ -0.62
TGFBR1-209ENST00000552516 TRIM67Q6ZTA4 783 aa11.21□□□□□ -0.62
TGFBR1-209ENST00000552516 C1orf127Q8N9H9 656 aa11.21□□□□□ -0.62
TGFBR1-209ENST00000552516 GSDMBQ8TAX9 411 aa11.21□□□□□ -0.62
TGFBR1-209ENST00000552516 PPWD1Q96BP3 646 aaKnown RBP11.21□□□□□ -0.62
TGFBR1-209ENST00000552516 EXOC2Q96KP1 924 aa11.21□□□□□ -0.62
TGFBR1-209ENST00000552516 FAM161BQ96MY7 647 aa11.21□□□□□ -0.62
TGFBR1-209ENST00000552516 NUDCD1Q96RS6 583 aa11.21□□□□□ -0.62
TGFBR1-209ENST00000552516 SLCO1B3Q9NPD5 702 aa11.21□□□□□ -0.62
TGFBR1-209ENST00000552516 UBQLN1Q9UMX0 589 aaKnown RBP11.21□□□□□ -0.62
TGFBR1-209ENST00000552516 TRPM3Q9HCF6 1732 aaPredicted RBP11.21□□□□□ -0.62
TGFBR1-209ENST00000552516 GYG2O15488 501 aa11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 SMPD1P17405 629 aa11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 GBP1P32455 592 aa11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 PLK1P53350 603 aa11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 ZNF618Q5T7W0 954 aa11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 RFWD2Q8NHY2 731 aa11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 IFT43Q96FT9 208 aa11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 TWNKQ96RR1 684 aa11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 TMBIM4Q9HC24 238 aa11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 ARMCX1Q9P291 453 aa11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 H3BRJ5 948 aa11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 RIPK2O43353 540 aa11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 ERBB2P04626 1255 aa11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 NOMO3P69849 1222 aa11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 OCRLQ01968 901 aa11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 SPATA21Q7Z572 469 aa11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 BLOC1S5Q8TDH9 187 aa11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 RPRD1AQ96P16 312 aaPredicted RBP11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 TRIM55Q9BYV6 548 aa11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 CDY2AQ9Y6F7 541 aa11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 PRR23AA6NEV1 266 aa11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 KBTBD13C9JR72 458 aa11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 GARSP41250 739 aaKnown RBP11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 PSEN2P49810 448 aa11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 ARFIP2P53365 341 aa11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 ZNF484Q5JVG2 852 aa11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 MTHFD1LQ6UB35 978 aa11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 UNC45BQ8IWX7 931 aa11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 RSPH1Q8WYR4 309 aa11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 RSRC1Q96IZ7 334 aaKnown RBP11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 CALR3Q96L12 384 aaKnown RBP11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 MAGEB5Q9BZ81 275 aa11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 SLC12A6Q9UHW9 1150 aa11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 HAO1Q9UJM8 370 aa11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 C9IYK1 514 aa11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 PRRG1O14668 218 aa11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 RGS2P41220 211 aa11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 GJA9P57773 515 aa11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 GCNT1Q02742 428 aa11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 UTP6Q9NYH9 597 aaKnown RBP11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 BARX2Q9UMQ3 279 aaPredicted RBP11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 ATP11BQ9Y2G3 1177 aa11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 ZMYM2Q9UBW7 1377 aa11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 A0A0B4J269 797 aa11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 MSI1O43347 362 aaKnown RBP11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 TPD52P55327 224 aaPredicted RBP11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 CHI3L2Q15782 390 aa11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 KCNT2Q6UVM3 1135 aa11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 CHSY1Q86X52 802 aa11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 SAMD3Q8N6K7 520 aa11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 EFCAB3Q8N7B9 438 aa11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 GLIS1Q8NBF1 620 aa11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 CHST12Q9NRB3 414 aa11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 NINJ2Q9NZG7 142 aa11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 STRCP1A6NGW2 1772 aa11.2□□□□□ -0.62
TGFBR1-209ENST00000552516 SKAP2O75563 359 aaPredicted RBP11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 KRT38O76015 456 aa11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 VDRP11473 427 aa11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 KCNA4P22459 653 aa11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 PRKCIP41743 596 aa11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 MAXP61244 160 aa11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 GAD2Q05329 585 aa11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 DDR2Q16832 855 aa11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 PAFAH2Q99487 392 aa11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 SFMBT1Q9UHJ3 866 aa11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 GOT1P17174 413 aa11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 BGNP21810 368 aa11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 ABCD1P33897 745 aa11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 SLC27A1Q6PCB7 646 aa11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 CRLF3Q8IUI8 442 aa11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 KCNK16Q96T55 309 aa11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 TRIM33Q9UPN9 1127 aa11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 WDR27A2RRH5 827 aa11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 FAM47DPA6NHR8 397 aa11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 RPL10AP62906 217 aaKnown RBP11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 USP10Q14694 798 aaKnown RBP11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 POM121L1PQ3SYA9 428 aa11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 PIGZQ86VD9 579 aa11.19□□□□□ -0.62
TGFBR1-209ENST00000552516 RNF148Q8N7C7 305 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms