RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 DRG1Q9Y295 367 aaKnown RBP4.96□□□□□ -1.62
CCDC38-206ENST00000548771 THRAP3Q9Y2W1 955 aaKnown RBP4.96□□□□□ -1.62
CCDC38-206ENST00000548771 hCG_2014768A0A024R1R8 64 aa4.95□□□□□ -1.62
CCDC38-206ENST00000548771 TRIM43BA6NCK2 446 aa4.95□□□□□ -1.62
CCDC38-206ENST00000548771 MBD3L4A6NDZ8 208 aaPredicted RBP4.95□□□□□ -1.62
CCDC38-206ENST00000548771 MBD3L3A6NE82 208 aaPredicted RBP4.95□□□□□ -1.62
CCDC38-206ENST00000548771 CCP110O43303 1012 aa4.95□□□□□ -1.62
CCDC38-206ENST00000548771 FRS3O43559 492 aa4.95□□□□□ -1.62
CCDC38-206ENST00000548771 CTNND1O60716 968 aaKnown RBP4.95□□□□□ -1.62
CCDC38-206ENST00000548771 MT-CO3P00414 261 aa4.95□□□□□ -1.62
CCDC38-206ENST00000548771 APEHP13798 732 aaKnown RBP4.95□□□□□ -1.62
CCDC38-206ENST00000548771 UQCRC1P31930 480 aa4.95□□□□□ -1.62
CCDC38-206ENST00000548771 CXorf57Q6NSI4 855 aaKnown RBP4.95□□□□□ -1.62
CCDC38-206ENST00000548771 PTCHD4Q6ZW05 846 aa4.95□□□□□ -1.62
CCDC38-206ENST00000548771 IGFBPL1Q8WX77 278 aa4.95□□□□□ -1.62
CCDC38-206ENST00000548771 TRIM43Q96BQ3 446 aaPredicted RBP4.95□□□□□ -1.62
CCDC38-206ENST00000548771 KAZALD1Q96I82 304 aa4.95□□□□□ -1.62
CCDC38-206ENST00000548771 FYTTD1Q96QD9 318 aaKnown RBP4.95□□□□□ -1.62
CCDC38-206ENST00000548771 ZSCAN32Q9NX65 697 aa4.95□□□□□ -1.62
CCDC38-206ENST00000548771 AFG3L2Q9Y4W6 797 aa4.95□□□□□ -1.62
CCDC38-206ENST00000548771 PAXBP1Q9Y5B6 917 aa4.95□□□□□ -1.62
CCDC38-206ENST00000548771 CD3EAPO15446 510 aaKnown RBP4.94□□□□□ -1.62
CCDC38-206ENST00000548771 PRPF3O43395 683 aaKnown RBP4.94□□□□□ -1.62
CCDC38-206ENST00000548771 SPRY2O43597 315 aa4.94□□□□□ -1.62
CCDC38-206ENST00000548771 MYBP10242 640 aa4.94□□□□□ -1.62
CCDC38-206ENST00000548771 THBS4P35443 961 aa4.94□□□□□ -1.62
CCDC38-206ENST00000548771 DIO1P49895 249 aa4.94□□□□□ -1.62
CCDC38-206ENST00000548771 ANAPC15P60006 121 aa4.94□□□□□ -1.62
CCDC38-206ENST00000548771 TWIST1Q15672 202 aa4.94□□□□□ -1.62
CCDC38-206ENST00000548771 C4orf46Q504U0 113 aa4.94□□□□□ -1.62
CCDC38-206ENST00000548771 APOA5Q6Q788 366 aa4.94□□□□□ -1.62
CCDC38-206ENST00000548771 SERPINA13PQ6UXR4 307 aa4.94□□□□□ -1.62
CCDC38-206ENST00000548771 KCTD20Q7Z5Y7 419 aa4.94□□□□□ -1.62
CCDC38-206ENST00000548771 TECPR1Q7Z6L1 1165 aa4.94□□□□□ -1.62
CCDC38-206ENST00000548771 PIP4P1Q86T03 277 aa4.94□□□□□ -1.62
CCDC38-206ENST00000548771 RAB11FIP4Q86YS3 637 aa4.94□□□□□ -1.62
CCDC38-206ENST00000548771 CHPFQ8IZ52 775 aa4.94□□□□□ -1.62
CCDC38-206ENST00000548771 SPARTQ8N0X7 666 aa4.94□□□□□ -1.62
CCDC38-206ENST00000548771 C16orf52Q8NHV5 167 aa4.94□□□□□ -1.62
CCDC38-206ENST00000548771 DNAJB14Q8TBM8 379 aa4.94□□□□□ -1.62
CCDC38-206ENST00000548771 SPSB4Q96A44 273 aa4.94□□□□□ -1.62
CCDC38-206ENST00000548771 FAM118BQ9BPY3 351 aa4.94□□□□□ -1.62
CCDC38-206ENST00000548771 VN1R3Q9BXE9 311 aa4.94□□□□□ -1.62
CCDC38-206ENST00000548771 TRIM36Q9NQ86 728 aa4.94□□□□□ -1.62
CCDC38-206ENST00000548771 TFCP2L1Q9NZI6 479 aa4.94□□□□□ -1.62
CCDC38-206ENST00000548771 CPNE7Q9UBL6 633 aa4.94□□□□□ -1.62
CCDC38-206ENST00000548771 LPAR3Q9UBY5 353 aa4.94□□□□□ -1.62
CCDC38-206ENST00000548771 LY6G6EA0A0G2JKS1 128 aa4.93□□□□□ -1.62
CCDC38-206ENST00000548771 CAPN8A6NHC0 703 aa4.93□□□□□ -1.62
CCDC38-206ENST00000548771 A6NNZ2 444 aa4.93□□□□□ -1.62
CCDC38-206ENST00000548771 ISM1B1AKI9 464 aa4.93□□□□□ -1.62
CCDC38-206ENST00000548771 PYCARD-AS1I3L0S3 204 aa4.93□□□□□ -1.62
CCDC38-206ENST00000548771 TRIM38O00635 465 aa4.93□□□□□ -1.62
CCDC38-206ENST00000548771 CES2O00748 559 aa4.93□□□□□ -1.62
CCDC38-206ENST00000548771 FGBP02675 491 aa4.93□□□□□ -1.62
CCDC38-206ENST00000548771 EPHA3P29320 983 aa4.93□□□□□ -1.62
CCDC38-206ENST00000548771 SLC7A1P30825 629 aa4.93□□□□□ -1.62
CCDC38-206ENST00000548771 SUMO3P55854 103 aaPredicted RBP4.93□□□□□ -1.62
CCDC38-206ENST00000548771 IGBP1P78318 339 aa4.93□□□□□ -1.62
CCDC38-206ENST00000548771 HTRA4P83105 476 aaPredicted RBP4.93□□□□□ -1.62
CCDC38-206ENST00000548771 MLC1Q15049 377 aa4.93□□□□□ -1.62
CCDC38-206ENST00000548771 RABEP1Q15276 862 aa4.93□□□□□ -1.62
CCDC38-206ENST00000548771 INSCQ1MX18 579 aa4.93□□□□□ -1.62
CCDC38-206ENST00000548771 C10orf25Q5T742 122 aa4.93□□□□□ -1.62
CCDC38-206ENST00000548771 CNGA4Q8IV77 575 aa4.93□□□□□ -1.62
CCDC38-206ENST00000548771 LIX1LQ8IVB5 337 aa4.93□□□□□ -1.62
CCDC38-206ENST00000548771 RAVER1Q8IY67 606 aaKnown RBP4.93□□□□□ -1.62
CCDC38-206ENST00000548771 MPP5Q8N3R9 675 aa4.93□□□□□ -1.62
CCDC38-206ENST00000548771 HMCESQ96FZ2 354 aa4.93□□□□□ -1.62
CCDC38-206ENST00000548771 WDYHV1Q96HA8 205 aa4.93□□□□□ -1.62
CCDC38-206ENST00000548771 CCDC17Q96LX7 622 aa4.93□□□□□ -1.62
CCDC38-206ENST00000548771 PPP1R9BQ96SB3 815 aa4.93□□□□□ -1.62
CCDC38-206ENST00000548771 EFHD1Q9BUP0 239 aa4.93□□□□□ -1.62
CCDC38-206ENST00000548771 DHX36Q9H2U1 1008 aaKnown RBP4.93□□□□□ -1.62
CCDC38-206ENST00000548771 AGPSO00116 658 aa4.92□□□□□ -1.62
CCDC38-206ENST00000548771 PSMD9O00233 223 aa4.92□□□□□ -1.62
CCDC38-206ENST00000548771 HOXD9P28356 352 aaPredicted RBP4.92□□□□□ -1.62
CCDC38-206ENST00000548771 PRKAR1BP31321 381 aa4.92□□□□□ -1.62
CCDC38-206ENST00000548771 SUMO2P61956 95 aaKnown RBP4.92□□□□□ -1.62
CCDC38-206ENST00000548771 SRSF1Q07955 248 aaKnown RBP eCLIP4.92□□□□□ -1.62
CCDC38-206ENST00000548771 LARS2Q15031 903 aaKnown RBP4.92□□□□□ -1.62
CCDC38-206ENST00000548771 CNN3Q15417 329 aaKnown RBP4.92□□□□□ -1.62
CCDC38-206ENST00000548771 SEC23BQ15437 767 aa4.92□□□□□ -1.62
CCDC38-206ENST00000548771 ZNF750Q32MQ0 723 aa4.92□□□□□ -1.62
CCDC38-206ENST00000548771 TMEM63BQ5T3F8 832 aa4.92□□□□□ -1.62
CCDC38-206ENST00000548771 PXDC1Q5TGL8 231 aa4.92□□□□□ -1.62
CCDC38-206ENST00000548771 DEF8Q6ZN54 512 aa4.92□□□□□ -1.62
CCDC38-206ENST00000548771 IRF2BP2Q7Z5L9 587 aa4.92□□□□□ -1.62
CCDC38-206ENST00000548771 MAP4K1Q92918 833 aa4.92□□□□□ -1.62
CCDC38-206ENST00000548771 VCPIP1Q96JH7 1222 aa4.92□□□□□ -1.62
CCDC38-206ENST00000548771 TRNAU1APQ9NX07 287 aaKnown RBP4.92□□□□□ -1.62
CCDC38-206ENST00000548771 COL20A1Q9P218 1284 aa4.92□□□□□ -1.62
CCDC38-206ENST00000548771 USP22Q9UPT9 525 aa4.92□□□□□ -1.62
CCDC38-206ENST00000548771 LOC102723971A0A1B0GUV8 181 aa4.91□□□□□ -1.62
CCDC38-206ENST00000548771 TMEM232C9JQI7 657 aa4.91□□□□□ -1.62
CCDC38-206ENST00000548771 FAM227AF5H4B4 570 aa4.91□□□□□ -1.62
CCDC38-206ENST00000548771 RRP9O43818 475 aaKnown RBP4.91□□□□□ -1.62
CCDC38-206ENST00000548771 PHKG2P15735 406 aa4.91□□□□□ -1.62
CCDC38-206ENST00000548771 KLRC1P26715 233 aa4.91□□□□□ -1.62
CCDC38-206ENST00000548771 NFE2Q16621 373 aaPredicted RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms