RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 PIWIL1Q96J94 861 aaKnown RBP30.24■■■□□ 2.43
BRF1-213ENST00000548421 ULBP1Q9BZM6 244 aa30.24■■■□□ 2.43
BRF1-213ENST00000548421 METTL5Q9NRN9 209 aaKnown RBP30.24■■■□□ 2.43
BRF1-213ENST00000548421 YIPF1Q9Y548 306 aa30.24■■■□□ 2.43
BRF1-213ENST00000548421 USP3Q9Y6I4 520 aa30.24■■■□□ 2.43
BRF1-213ENST00000548421 CDH23Q9H251 3354 aa30.24■■■□□ 2.43
BRF1-213ENST00000548421 ZNF638Q14966 1978 aaKnown RBP30.23■■■□□ 2.43
BRF1-213ENST00000548421 GLUD1P00367 558 aa30.23■■■□□ 2.43
BRF1-213ENST00000548421 ATF6P18850 670 aa30.23■■■□□ 2.43
BRF1-213ENST00000548421 MRPS5P82675 430 aaKnown RBP30.23■■■□□ 2.43
BRF1-213ENST00000548421 DCUN1D2Q6PH85 259 aa30.23■■■□□ 2.43
BRF1-213ENST00000548421 SCML4Q8N228 414 aa30.23■■■□□ 2.43
BRF1-213ENST00000548421 FEZF2Q8TBJ5 459 aa30.23■■■□□ 2.43
BRF1-213ENST00000548421 MCEEQ96PE7 176 aa30.23■■■□□ 2.43
BRF1-213ENST00000548421 IRX2Q9BZI1 471 aaPredicted RBP30.23■■■□□ 2.43
BRF1-213ENST00000548421 FBXW11Q9UKB1 542 aa30.23■■■□□ 2.43
BRF1-213ENST00000548421 MYO7AQ13402 2215 aa30.23■■■□□ 2.43
BRF1-213ENST00000548421 SART1O43290 800 aaKnown RBP30.22■■■□□ 2.43
BRF1-213ENST00000548421 ZNF500O60304 480 aaPredicted RBP30.22■■■□□ 2.43
BRF1-213ENST00000548421 GJB6O95452 261 aa30.22■■■□□ 2.43
BRF1-213ENST00000548421 ZBED1O96006 694 aa30.22■■■□□ 2.43
BRF1-213ENST00000548421 C1RP00736 705 aa30.22■■■□□ 2.43
BRF1-213ENST00000548421 DENND5BQ6ZUT9 1274 aa30.22■■■□□ 2.43
BRF1-213ENST00000548421 SLC26A9Q7LBE3 791 aa30.22■■■□□ 2.43
BRF1-213ENST00000548421 TPCN2Q8NHX9 752 aa30.22■■■□□ 2.43
BRF1-213ENST00000548421 SCAMP5Q8TAC9 235 aa30.22■■■□□ 2.43
BRF1-213ENST00000548421 ANAPC7Q9UJX3 599 aa30.22■■■□□ 2.43
BRF1-213ENST00000548421 CAPN6Q9Y6Q1 641 aa30.22■■■□□ 2.43
BRF1-213ENST00000548421 USP17L7P0C7H9 530 aa30.21■■■□□ 2.43
BRF1-213ENST00000548421 ALDH1A3P47895 512 aa30.21■■■□□ 2.43
BRF1-213ENST00000548421 CLCN4P51793 760 aa30.21■■■□□ 2.43
BRF1-213ENST00000548421 DAOAP59103 153 aa30.21■■■□□ 2.43
BRF1-213ENST00000548421 EFHC1Q5JVL4 640 aa30.21■■■□□ 2.43
BRF1-213ENST00000548421 PM20D1Q6GTS8 502 aa30.21■■■□□ 2.43
BRF1-213ENST00000548421 NYAP1Q6ZVC0 841 aa30.21■■■□□ 2.43
BRF1-213ENST00000548421 GPR152Q8TDT2 470 aa30.21■■■□□ 2.43
BRF1-213ENST00000548421 ALS2CR12Q96Q35 445 aa30.21■■■□□ 2.43
BRF1-213ENST00000548421 FBXO44Q9H4M3 255 aa30.21■■■□□ 2.43
BRF1-213ENST00000548421 INSL5Q9Y5Q6 135 aa30.21■■■□□ 2.43
BRF1-213ENST00000548421 RTN3O95197 1032 aaPredicted RBP30.2■■■□□ 2.43
BRF1-213ENST00000548421 RPL7AP62424 266 aaKnown RBP30.2■■■□□ 2.43
BRF1-213ENST00000548421 TRIM58Q8NG06 486 aa30.2■■■□□ 2.43
BRF1-213ENST00000548421 IRGQQ8WZA9 623 aa30.2■■■□□ 2.43
BRF1-213ENST00000548421 ASNSD1Q9NWL6 643 aa30.2■■■□□ 2.43
BRF1-213ENST00000548421 COMMD8Q9NX08 183 aa30.2■■■□□ 2.43
BRF1-213ENST00000548421 IL37Q9NZH6 218 aa30.2■■■□□ 2.43
BRF1-213ENST00000548421 TMEM59LQ9UK28 342 aa30.2■■■□□ 2.43
BRF1-213ENST00000548421 COLQQ9Y215 455 aaPredicted RBP30.2■■■□□ 2.43
BRF1-213ENST00000548421 TMEM191CA6NGB0 347 aa30.19■■■□□ 2.42
BRF1-213ENST00000548421 SPATA31D3P0C874 917 aa30.19■■■□□ 2.42
BRF1-213ENST00000548421 IFRD2Q12894 506 aaPredicted RBP30.19■■■□□ 2.42
BRF1-213ENST00000548421 PLD1Q13393 1074 aa30.19■■■□□ 2.42
BRF1-213ENST00000548421 SPATA31D4Q6ZUB0 917 aa30.19■■■□□ 2.42
BRF1-213ENST00000548421 CCDC149Q6ZUS6 474 aa30.19■■■□□ 2.42
BRF1-213ENST00000548421 KREMEN2Q8NCW0 462 aa30.19■■■□□ 2.42
BRF1-213ENST00000548421 STKLD1Q8NE28 680 aa30.19■■■□□ 2.42
BRF1-213ENST00000548421 GIPC2Q8TF65 315 aa30.19■■■□□ 2.42
BRF1-213ENST00000548421 C16orf45Q96MC5 204 aaPredicted RBP30.19■■■□□ 2.42
BRF1-213ENST00000548421 SLC38A8A6NNN8 435 aa30.19■■■□□ 2.42
BRF1-213ENST00000548421 HSF2BPO75031 334 aa30.19■■■□□ 2.42
BRF1-213ENST00000548421 CLASP2O75122 1294 aaKnown RBP30.19■■■□□ 2.42
BRF1-213ENST00000548421 GLI1P08151 1106 aa30.19■■■□□ 2.42
BRF1-213ENST00000548421 RFC1P35251 1148 aaPredicted RBP30.19■■■□□ 2.42
BRF1-213ENST00000548421 TAF5Q15542 800 aa30.19■■■□□ 2.42
BRF1-213ENST00000548421 PTPROQ16827 1216 aa30.19■■■□□ 2.42
BRF1-213ENST00000548421 ARCQ7LC44 396 aa30.19■■■□□ 2.42
BRF1-213ENST00000548421 JOSD2Q8TAC2 188 aa30.19■■■□□ 2.42
BRF1-213ENST00000548421 NDRG1Q92597 394 aaKnown RBP30.19■■■□□ 2.42
BRF1-213ENST00000548421 KHSRPQ92945 711 aaKnown RBP eCLIP30.19■■■□□ 2.42
BRF1-213ENST00000548421 TRIM7Q9C029 511 aa30.19■■■□□ 2.42
BRF1-213ENST00000548421 LCMT1Q9UIC8 334 aa30.19■■■□□ 2.42
BRF1-213ENST00000548421 MYO9BQ13459 2157 aa30.18■■■□□ 2.42
BRF1-213ENST00000548421 GRID2IPA4D2P6 1211 aa30.18■■■□□ 2.42
BRF1-213ENST00000548421 MYO1FO00160 1098 aa30.18■■■□□ 2.42
BRF1-213ENST00000548421 GRAP2O75791 330 aa30.18■■■□□ 2.42
BRF1-213ENST00000548421 RNASE9P60153 205 aaKnown RBP30.18■■■□□ 2.42
BRF1-213ENST00000548421 GNG11P61952 73 aa30.18■■■□□ 2.42
BRF1-213ENST00000548421 USP46P62068 366 aa30.18■■■□□ 2.42
BRF1-213ENST00000548421 TWF1Q12792 350 aa30.18■■■□□ 2.42
BRF1-213ENST00000548421 VEPH1Q14D04 833 aa30.18■■■□□ 2.42
BRF1-213ENST00000548421 ZNF569Q5MCW4 686 aa30.18■■■□□ 2.42
BRF1-213ENST00000548421 SLC7A14Q8TBB6 771 aa30.18■■■□□ 2.42
BRF1-213ENST00000548421 FAM149B1Q96BN6 582 aa30.18■■■□□ 2.42
BRF1-213ENST00000548421 BTBD6Q96KE9 485 aa30.18■■■□□ 2.42
BRF1-213ENST00000548421 ZNF576Q9H609 170 aa30.18■■■□□ 2.42
BRF1-213ENST00000548421 EHD2Q9NZN4 543 aa30.18■■■□□ 2.42
BRF1-213ENST00000548421 SCML2Q9UQR0 700 aa30.18■■■□□ 2.42
BRF1-213ENST00000548421 FAM92AA1XBS5 289 aa30.17■■■□□ 2.42
BRF1-213ENST00000548421 BUB1BO60566 1050 aaPredicted RBP30.17■■■□□ 2.42
BRF1-213ENST00000548421 PALMO75781 387 aa30.17■■■□□ 2.42
BRF1-213ENST00000548421 YWHAQP27348 245 aa30.17■■■□□ 2.42
BRF1-213ENST00000548421 C11orf63Q6NUN7 778 aa30.17■■■□□ 2.42
BRF1-213ENST00000548421 BHLHA9Q7RTU4 235 aa30.17■■■□□ 2.42
BRF1-213ENST00000548421 EMC1Q8N766 993 aa30.17■■■□□ 2.42
BRF1-213ENST00000548421 FNIP1Q8TF40 1166 aa30.17■■■□□ 2.42
BRF1-213ENST00000548421 MRPL38Q96DV4 380 aaKnown RBP30.17■■■□□ 2.42
BRF1-213ENST00000548421 YJEFN3A6XGL0 299 aa30.16■■■□□ 2.42
BRF1-213ENST00000548421 E7ENQ6 273 aa30.16■■■□□ 2.42
BRF1-213ENST00000548421 RFXAPO00287 272 aa30.16■■■□□ 2.42
BRF1-213ENST00000548421 C8AP07357 584 aa30.16■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms