RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 FAM92AA1XBS5 289 aa14.15□□□□□ -0.14
CPSF6-204ENST00000547486 PRR5-ARHGAP8B1AHC4 643 aa14.15□□□□□ -0.14
CPSF6-204ENST00000547486 AXIN1O15169 862 aa14.15□□□□□ -0.14
CPSF6-204ENST00000547486 MAPK13O15264 365 aa14.15□□□□□ -0.14
CPSF6-204ENST00000547486 RTN3O95197 1032 aaPredicted RBP14.15□□□□□ -0.14
CPSF6-204ENST00000547486 CYP17A1P05093 508 aa14.15□□□□□ -0.14
CPSF6-204ENST00000547486 ZDHHC11BP0C7U3 371 aa14.15□□□□□ -0.14
CPSF6-204ENST00000547486 MBL2P11226 248 aaPredicted RBP14.15□□□□□ -0.14
CPSF6-204ENST00000547486 MAP3K7CLP57077 242 aa14.15□□□□□ -0.14
CPSF6-204ENST00000547486 ARHGAP8P85298 464 aa14.15□□□□□ -0.14
CPSF6-204ENST00000547486 LMNB2Q03252 620 aa14.15□□□□□ -0.14
CPSF6-204ENST00000547486 DHCR24Q15392 516 aa14.15□□□□□ -0.14
CPSF6-204ENST00000547486 SNX30Q5VWJ9 437 aa14.15□□□□□ -0.14
CPSF6-204ENST00000547486 SYT13Q7L8C5 426 aa14.15□□□□□ -0.14
CPSF6-204ENST00000547486 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.15□□□□□ -0.14
CPSF6-204ENST00000547486 KBTBD6Q86V97 674 aa14.15□□□□□ -0.14
CPSF6-204ENST00000547486 UNC93AQ86WB7 457 aa14.15□□□□□ -0.14
CPSF6-204ENST00000547486 GUF1Q8N442 669 aaKnown RBP14.15□□□□□ -0.14
CPSF6-204ENST00000547486 CAMKK1Q8N5S9 505 aa14.15□□□□□ -0.14
CPSF6-204ENST00000547486 TAS1R2Q8TE23 839 aa14.15□□□□□ -0.14
CPSF6-204ENST00000547486 OVCA2Q8WZ82 227 aa14.15□□□□□ -0.14
CPSF6-204ENST00000547486 FBXO32Q969P5 355 aa14.15□□□□□ -0.14
CPSF6-204ENST00000547486 WBP2Q969T9 261 aa14.15□□□□□ -0.14
CPSF6-204ENST00000547486 EEF2KMTQ96G04 330 aa14.15□□□□□ -0.14
CPSF6-204ENST00000547486 SMARCD1Q96GM5 515 aa14.15□□□□□ -0.14
CPSF6-204ENST00000547486 CCSER2Q9H7U1 834 aa14.15□□□□□ -0.14
CPSF6-204ENST00000547486 CSNK1G1Q9HCP0 422 aa14.15□□□□□ -0.14
CPSF6-204ENST00000547486 DMAP1Q9NPF5 467 aaPredicted RBP14.15□□□□□ -0.14
CPSF6-204ENST00000547486 KRT82Q9NSB4 513 aa14.15□□□□□ -0.14
CPSF6-204ENST00000547486 GMIPQ9P107 970 aa14.15□□□□□ -0.14
CPSF6-204ENST00000547486 PTPRDP23468 1912 aa14.15□□□□□ -0.14
CPSF6-204ENST00000547486 GDF9O60383 454 aa14.14□□□□□ -0.15
CPSF6-204ENST00000547486 LRP3O75074 770 aa14.14□□□□□ -0.15
CPSF6-204ENST00000547486 RPP40O75818 363 aaKnown RBP14.14□□□□□ -0.15
CPSF6-204ENST00000547486 KIF20AO95235 890 aa14.14□□□□□ -0.15
CPSF6-204ENST00000547486 P4HA1P13674 534 aa14.14□□□□□ -0.15
CPSF6-204ENST00000547486 PIK3CAP42336 1068 aa14.14□□□□□ -0.15
CPSF6-204ENST00000547486 SEC13P55735 322 aa14.14□□□□□ -0.15
CPSF6-204ENST00000547486 MCCD1P59942 119 aaPredicted RBP14.14□□□□□ -0.15
CPSF6-204ENST00000547486 ADAM9Q13443 819 aa14.14□□□□□ -0.15
CPSF6-204ENST00000547486 DMC1Q14565 340 aa14.14□□□□□ -0.15
CPSF6-204ENST00000547486 CSRP2Q16527 193 aa14.14□□□□□ -0.15
CPSF6-204ENST00000547486 ZCWPW2Q504Y3 356 aa14.14□□□□□ -0.15
CPSF6-204ENST00000547486 C2orf27AQ580R0 203 aa14.14□□□□□ -0.15
CPSF6-204ENST00000547486 HECTD3Q5T447 861 aa14.14□□□□□ -0.15
CPSF6-204ENST00000547486 SMYD4Q8IYR2 804 aaPredicted RBP14.14□□□□□ -0.15
CPSF6-204ENST00000547486 KIAA1958Q8N8K9 716 aa14.14□□□□□ -0.15
CPSF6-204ENST00000547486 PDZD8Q8NEN9 1154 aa14.14□□□□□ -0.15
CPSF6-204ENST00000547486 USP33Q8TEY7 942 aa14.14□□□□□ -0.15
CPSF6-204ENST00000547486 WHAMMQ8TF30 809 aa14.14□□□□□ -0.15
CPSF6-204ENST00000547486 EXOC4Q96A65 974 aa14.14□□□□□ -0.15
CPSF6-204ENST00000547486 FAM49BQ9NUQ9 324 aa14.14□□□□□ -0.15
CPSF6-204ENST00000547486 CEP250Q9BV73 2442 aa14.14□□□□□ -0.15
CPSF6-204ENST00000547486 ATP8B3O60423 1300 aa14.14□□□□□ -0.15
CPSF6-204ENST00000547486 ZNF638Q14966 1978 aaKnown RBP14.13□□□□□ -0.15
CPSF6-204ENST00000547486 E2F8A0AVK6 867 aa14.13□□□□□ -0.15
CPSF6-204ENST00000547486 DCDC2BA2VCK2 349 aa14.13□□□□□ -0.15
CPSF6-204ENST00000547486 HHLA1C9JL84 531 aa14.13□□□□□ -0.15
CPSF6-204ENST00000547486 SLC9A3R1O14745 358 aaPredicted RBP14.13□□□□□ -0.15
CPSF6-204ENST00000547486 DCLK1O15075 740 aa14.13□□□□□ -0.15
CPSF6-204ENST00000547486 CHRM1P11229 460 aaPredicted RBP14.13□□□□□ -0.15
CPSF6-204ENST00000547486 ADORA2BP29275 332 aa14.13□□□□□ -0.15
CPSF6-204ENST00000547486 PSMC2P35998 433 aaKnown RBP14.13□□□□□ -0.15
CPSF6-204ENST00000547486 INCA1Q0VD86 236 aa14.13□□□□□ -0.15
CPSF6-204ENST00000547486 CCDC6Q16204 474 aa14.13□□□□□ -0.15
CPSF6-204ENST00000547486 EMC10Q5UCC4 262 aa14.13□□□□□ -0.15
CPSF6-204ENST00000547486 PRR23CQ6ZRP0 262 aa14.13□□□□□ -0.15
CPSF6-204ENST00000547486 INTS8Q75QN2 995 aaKnown RBP14.13□□□□□ -0.15
CPSF6-204ENST00000547486 GPRIN1Q7Z2K8 1008 aa14.13□□□□□ -0.15
CPSF6-204ENST00000547486 CACNA2D4Q7Z3S7 1137 aa14.13□□□□□ -0.15
CPSF6-204ENST00000547486 C12orf40Q86WS4 652 aa14.13□□□□□ -0.15
CPSF6-204ENST00000547486 FAM186BQ8IYM0 893 aa14.13□□□□□ -0.15
CPSF6-204ENST00000547486 SEMA4DQ92854 862 aa14.13□□□□□ -0.15
CPSF6-204ENST00000547486 CCDC47Q96A33 483 aaKnown RBP14.13□□□□□ -0.15
CPSF6-204ENST00000547486 ARRDC1-AS1Q9H2J1 176 aa14.13□□□□□ -0.15
CPSF6-204ENST00000547486 MMRN2Q9H8L6 949 aa14.13□□□□□ -0.15
CPSF6-204ENST00000547486 COMMD8Q9NX08 183 aa14.13□□□□□ -0.15
CPSF6-204ENST00000547486 CDV3Q9UKY7 258 aaKnown RBP14.13□□□□□ -0.15
CPSF6-204ENST00000547486 ATP6V1DQ9Y5K8 247 aa14.13□□□□□ -0.15
CPSF6-204ENST00000547486 CACNA1AO00555 2505 aa14.12□□□□□ -0.15
CPSF6-204ENST00000547486 ATG2BQ96BY7 2078 aa14.12□□□□□ -0.15
CPSF6-204ENST00000547486 A0A0A0MRY4 1105 aa14.12□□□□□ -0.15
CPSF6-204ENST00000547486 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.12□□□□□ -0.15
CPSF6-204ENST00000547486 TBX18O95935 607 aa14.12□□□□□ -0.15
CPSF6-204ENST00000547486 CCDC192P0DO97 292 aa14.12□□□□□ -0.15
CPSF6-204ENST00000547486 SDHBP21912 280 aa14.12□□□□□ -0.15
CPSF6-204ENST00000547486 RPL13P26373 211 aaKnown RBP14.12□□□□□ -0.15
CPSF6-204ENST00000547486 PNOCQ13519 176 aa14.12□□□□□ -0.15
CPSF6-204ENST00000547486 CLEC20AQ6ZU45 233 aa14.12□□□□□ -0.15
CPSF6-204ENST00000547486 DDX42Q86XP3 938 aaKnown RBP eCLIP14.12□□□□□ -0.15
CPSF6-204ENST00000547486 FMR1NBQ8N0W7 255 aaPredicted RBP14.12□□□□□ -0.15
CPSF6-204ENST00000547486 CCDC33Q8N5R6 958 aa14.12□□□□□ -0.15
CPSF6-204ENST00000547486 CYFIP2Q96F07 1278 aa14.12□□□□□ -0.15
CPSF6-204ENST00000547486 ZC3H10Q96K80 434 aaKnown RBP14.12□□□□□ -0.15
CPSF6-204ENST00000547486 HNRNPABQ99729 332 aaKnown RBP14.12□□□□□ -0.15
CPSF6-204ENST00000547486 OSER1Q9NX31 292 aa14.12□□□□□ -0.15
CPSF6-204ENST00000547486 EBF1Q9UH73 591 aa14.12□□□□□ -0.15
CPSF6-204ENST00000547486 INVSQ9Y283 1065 aa14.12□□□□□ -0.15
CPSF6-204ENST00000547486 GREM1O60565 184 aa14.11□□□□□ -0.15
CPSF6-204ENST00000547486 CILPO75339 1184 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms