RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 DPP7Q9UHL4 492 aa18.21■□□□□ 0.51
RBFOX1-207ENST00000547338 LCMT1Q9UIC8 334 aa18.21■□□□□ 0.51
RBFOX1-207ENST00000547338 ADAM21Q9UKJ8 722 aa18.21■□□□□ 0.51
RBFOX1-207ENST00000547338 USTQ9Y2C2 406 aa18.21■□□□□ 0.51
RBFOX1-207ENST00000547338 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.21■□□□□ 0.51
RBFOX1-207ENST00000547338 ALG6Q9Y672 507 aa18.21■□□□□ 0.51
RBFOX1-207ENST00000547338 CCDC66A2RUB6 948 aa18.2■□□□□ 0.5
RBFOX1-207ENST00000547338 GOLGA6BA6NDN3 693 aa18.2■□□□□ 0.5
RBFOX1-207ENST00000547338 GOLGA8KD6RF30 607 aa18.2■□□□□ 0.5
RBFOX1-207ENST00000547338 XPOTO43592 962 aaKnown RBP18.2■□□□□ 0.5
RBFOX1-207ENST00000547338 OAZ2O95190 189 aa18.2■□□□□ 0.5
RBFOX1-207ENST00000547338 IL18RAPO95256 599 aa18.2■□□□□ 0.5
RBFOX1-207ENST00000547338 ALADP13716 330 aa18.2■□□□□ 0.5
RBFOX1-207ENST00000547338 TNNI1P19237 187 aa18.2■□□□□ 0.5
RBFOX1-207ENST00000547338 GBP1P32455 592 aa18.2■□□□□ 0.5
RBFOX1-207ENST00000547338 SND1Q7KZF4 910 aaKnown RBP eCLIP18.2■□□□□ 0.5
RBFOX1-207ENST00000547338 SLC7A14Q8TBB6 771 aa18.2■□□□□ 0.5
RBFOX1-207ENST00000547338 SLC20A1Q8WUM9 679 aa18.2■□□□□ 0.5
RBFOX1-207ENST00000547338 ARHGEF26Q96DR7 871 aa18.2■□□□□ 0.5
RBFOX1-207ENST00000547338 FAXDC2Q96IV6 333 aa18.2■□□□□ 0.5
RBFOX1-207ENST00000547338 OSGEPQ9NPF4 335 aa18.2■□□□□ 0.5
RBFOX1-207ENST00000547338 DPP3Q9NY33 737 aa18.2■□□□□ 0.5
RBFOX1-207ENST00000547338 RBAKQ9NYW8 714 aaPredicted RBP18.2■□□□□ 0.5
RBFOX1-207ENST00000547338 CNTN6Q9UQ52 1028 aa18.2■□□□□ 0.5
RBFOX1-207ENST00000547338 NR2E1Q9Y466 385 aa18.2■□□□□ 0.5
RBFOX1-207ENST00000547338 CLUHO75153 1309 aa18.2■□□□□ 0.5
RBFOX1-207ENST00000547338 FAM187AA6NFU0 413 aa18.19■□□□□ 0.5
RBFOX1-207ENST00000547338 SART1O43290 800 aaKnown RBP18.19■□□□□ 0.5
RBFOX1-207ENST00000547338 HSF2BPO75031 334 aa18.19■□□□□ 0.5
RBFOX1-207ENST00000547338 SEC24AO95486 1093 aa18.19■□□□□ 0.5
RBFOX1-207ENST00000547338 GLI1P08151 1106 aa18.19■□□□□ 0.5
RBFOX1-207ENST00000547338 MYBL2P10244 700 aa18.19■□□□□ 0.5
RBFOX1-207ENST00000547338 CTNNA2P26232 953 aa18.19■□□□□ 0.5
RBFOX1-207ENST00000547338 SLC7A5Q01650 507 aa18.19■□□□□ 0.5
RBFOX1-207ENST00000547338 GUCY2DQ02846 1103 aa18.19■□□□□ 0.5
RBFOX1-207ENST00000547338 CTXN3Q4LDR2 81 aa18.19■□□□□ 0.5
RBFOX1-207ENST00000547338 CCDC149Q6ZUS6 474 aa18.19■□□□□ 0.5
RBFOX1-207ENST00000547338 ZDHHC14Q8IZN3 488 aa18.19■□□□□ 0.5
RBFOX1-207ENST00000547338 C1orf127Q8N9H9 656 aa18.19■□□□□ 0.5
RBFOX1-207ENST00000547338 ZNF461Q8TAF7 563 aa18.19■□□□□ 0.5
RBFOX1-207ENST00000547338 DDX1Q92499 740 aaKnown RBP18.19■□□□□ 0.5
RBFOX1-207ENST00000547338 SEC14L1Q92503 715 aa18.19■□□□□ 0.5
RBFOX1-207ENST00000547338 SENP8Q96LD8 212 aa18.19■□□□□ 0.5
RBFOX1-207ENST00000547338 RAB17Q9H0T7 212 aa18.19■□□□□ 0.5
RBFOX1-207ENST00000547338 SMOC2Q9H3U7 446 aa18.19■□□□□ 0.5
RBFOX1-207ENST00000547338 FAM114A2Q9NRY5 505 aa18.19■□□□□ 0.5
RBFOX1-207ENST00000547338 TAS2R14Q9NYV8 317 aa18.19■□□□□ 0.5
RBFOX1-207ENST00000547338 EHD2Q9NZN4 543 aa18.19■□□□□ 0.5
RBFOX1-207ENST00000547338 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.19■□□□□ 0.5
RBFOX1-207ENST00000547338 HLA-DRAP01903 254 aa18.18■□□□□ 0.5
RBFOX1-207ENST00000547338 HOXA9P31269 272 aa18.18■□□□□ 0.5
RBFOX1-207ENST00000547338 SLC1A1P43005 524 aa18.18■□□□□ 0.5
RBFOX1-207ENST00000547338 NTHL1P78549 312 aa18.18■□□□□ 0.5
RBFOX1-207ENST00000547338 DHX34Q14147 1143 aaKnown RBP18.18■□□□□ 0.5
RBFOX1-207ENST00000547338 CLEC16AQ2KHT3 1053 aa18.18■□□□□ 0.5
RBFOX1-207ENST00000547338 ZNF280DQ6N043 979 aa18.18■□□□□ 0.5
RBFOX1-207ENST00000547338 ELMSAN1Q6PJG2 1045 aa18.18■□□□□ 0.5
RBFOX1-207ENST00000547338 SLC47A2Q86VL8 602 aa18.18■□□□□ 0.5
RBFOX1-207ENST00000547338 TDRD5Q8NAT2 981 aaKnown RBP18.18■□□□□ 0.5
RBFOX1-207ENST00000547338 APPL2Q8NEU8 664 aa18.18■□□□□ 0.5
RBFOX1-207ENST00000547338 ZNF516Q92618 1163 aa18.18■□□□□ 0.5
RBFOX1-207ENST00000547338 LRRC45Q96CN5 670 aa18.18■□□□□ 0.5
RBFOX1-207ENST00000547338 MYADMQ96S97 322 aa18.18■□□□□ 0.5
RBFOX1-207ENST00000547338 PCDHB18PQ96TA0 734 aa18.18■□□□□ 0.5
RBFOX1-207ENST00000547338 RTP3Q9BQQ7 232 aa18.18■□□□□ 0.5
RBFOX1-207ENST00000547338 SMARCAL1Q9NZC9 954 aa18.18■□□□□ 0.5
RBFOX1-207ENST00000547338 SIX4Q9UIU6 781 aa18.18■□□□□ 0.5
RBFOX1-207ENST00000547338 H7C4K7 107 aa18.18■□□□□ 0.5
RBFOX1-207ENST00000547338 CCL16O15467 120 aa18.18■□□□□ 0.5
RBFOX1-207ENST00000547338 RAD51CO43502 376 aa18.18■□□□□ 0.5
RBFOX1-207ENST00000547338 SYF2O95926 243 aaKnown RBP18.18■□□□□ 0.5
RBFOX1-207ENST00000547338 ASGR2P07307 311 aa18.18■□□□□ 0.5
RBFOX1-207ENST00000547338 POU2F2P09086 479 aa18.18■□□□□ 0.5
RBFOX1-207ENST00000547338 HNRNPA1P09651 372 aaKnown RBP eCLIP18.18■□□□□ 0.5
RBFOX1-207ENST00000547338 OR4Q2P0C623 313 aa18.18■□□□□ 0.5
RBFOX1-207ENST00000547338 TYMPP19971 482 aa18.18■□□□□ 0.5
RBFOX1-207ENST00000547338 DRG2P55039 364 aaKnown RBP18.18■□□□□ 0.5
RBFOX1-207ENST00000547338 ZXDAP98168 799 aa18.18■□□□□ 0.5
RBFOX1-207ENST00000547338 TMEM31Q5JXX7 168 aa18.18■□□□□ 0.5
RBFOX1-207ENST00000547338 SPDYCQ5MJ68 293 aa18.18■□□□□ 0.5
RBFOX1-207ENST00000547338 PPM1LQ5SGD2 360 aa18.18■□□□□ 0.5
RBFOX1-207ENST00000547338 LIN9Q5TKA1 542 aa18.18■□□□□ 0.5
RBFOX1-207ENST00000547338 LMBRD2Q68DH5 695 aaPredicted RBP18.18■□□□□ 0.5
RBFOX1-207ENST00000547338 NT5DC4Q86YG4 428 aa18.18■□□□□ 0.5
RBFOX1-207ENST00000547338 WDR49Q8IV35 697 aa18.18■□□□□ 0.5
RBFOX1-207ENST00000547338 EDAQ92838 391 aa18.18■□□□□ 0.5
RBFOX1-207ENST00000547338 KAT5Q92993 513 aa18.18■□□□□ 0.5
RBFOX1-207ENST00000547338 RUFY1Q96T51 708 aa18.18■□□□□ 0.5
RBFOX1-207ENST00000547338 SH3GL2Q99962 352 aa18.18■□□□□ 0.5
RBFOX1-207ENST00000547338 FAM129AQ9BZQ8 928 aa18.18■□□□□ 0.5
RBFOX1-207ENST00000547338 ST7Q9NRC1 585 aa18.18■□□□□ 0.5
RBFOX1-207ENST00000547338 HCFC1R1Q9NWW0 138 aa18.18■□□□□ 0.5
RBFOX1-207ENST00000547338 LIMD1Q9UGP4 676 aa18.18■□□□□ 0.5
RBFOX1-207ENST00000547338 RAPGEFL1Q9UHV5 662 aa18.18■□□□□ 0.5
RBFOX1-207ENST00000547338 ARHGEF37A1IGU5 675 aa18.17■□□□□ 0.5
RBFOX1-207ENST00000547338 CYP11A1P05108 521 aa18.17■□□□□ 0.5
RBFOX1-207ENST00000547338 MMEP08473 750 aa18.17■□□□□ 0.5
RBFOX1-207ENST00000547338 ATF2P15336 505 aa18.17■□□□□ 0.5
RBFOX1-207ENST00000547338 PIK3CAP42336 1068 aa18.17■□□□□ 0.5
RBFOX1-207ENST00000547338 DNA2P51530 1060 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms