RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 ZNF677Q86XU0 584 aa15.25■□□□□ 0.03
DDX54-203ENST00000546869 FMNL3Q8IVF7 1028 aa15.25■□□□□ 0.03
DDX54-203ENST00000546869 MFSD6LQ8IWD5 586 aa15.25■□□□□ 0.03
DDX54-203ENST00000546869 ARHGAP18Q8N392 663 aa15.25■□□□□ 0.03
DDX54-203ENST00000546869 CELF5Q8N6W0 485 aaKnown RBP15.25■□□□□ 0.03
DDX54-203ENST00000546869 MAB21L3Q8N8X9 362 aa15.25■□□□□ 0.03
DDX54-203ENST00000546869 UBA3Q8TBC4 463 aa15.25■□□□□ 0.03
DDX54-203ENST00000546869 DEPDC1BQ8WUY9 529 aa15.25■□□□□ 0.03
DDX54-203ENST00000546869 SECISBP2LQ93073 1101 aaKnown RBP15.25■□□□□ 0.03
DDX54-203ENST00000546869 IQCDQ96DY2 449 aa15.25■□□□□ 0.03
DDX54-203ENST00000546869 PCMTD1Q96MG8 357 aaPredicted RBP15.25■□□□□ 0.03
DDX54-203ENST00000546869 SPAG5Q96R06 1193 aa15.25■□□□□ 0.03
DDX54-203ENST00000546869 ANP32EQ9BTT0 268 aa15.25■□□□□ 0.03
DDX54-203ENST00000546869 ACP6Q9NPH0 428 aa15.25■□□□□ 0.03
DDX54-203ENST00000546869 TLR8Q9NR97 1041 aaKnown RBP15.25■□□□□ 0.03
DDX54-203ENST00000546869 CLIC5Q9NZA1 410 aa15.25■□□□□ 0.03
DDX54-203ENST00000546869 CHORDC1Q9UHD1 332 aaPredicted RBP15.25■□□□□ 0.03
DDX54-203ENST00000546869 MUTYHQ9UIF7 546 aa15.25■□□□□ 0.03
DDX54-203ENST00000546869 GREB1Q4ZG55 1949 aa15.25■□□□□ 0.03
DDX54-203ENST00000546869 BDP1A6H8Y1 2624 aa15.25■□□□□ 0.03
DDX54-203ENST00000546869 TRAV19A0A0A6YYK7 116 aa15.24■□□□□ 0.03
DDX54-203ENST00000546869 M0QYV0 167 aa15.24■□□□□ 0.03
DDX54-203ENST00000546869 TULP2O00295 520 aa15.24■□□□□ 0.03
DDX54-203ENST00000546869 ZBED1O96006 694 aa15.24■□□□□ 0.03
DDX54-203ENST00000546869 ASGR2P07307 311 aa15.24■□□□□ 0.03
DDX54-203ENST00000546869 PSMC3P17980 439 aa15.24■□□□□ 0.03
DDX54-203ENST00000546869 HDCP19113 662 aa15.24■□□□□ 0.03
DDX54-203ENST00000546869 ACADSBP45954 432 aa15.24■□□□□ 0.03
DDX54-203ENST00000546869 TKTL1P51854 596 aa15.24■□□□□ 0.03
DDX54-203ENST00000546869 SLC7A9P82251 487 aa15.24■□□□□ 0.03
DDX54-203ENST00000546869 ZXDAP98168 799 aa15.24■□□□□ 0.03
DDX54-203ENST00000546869 FCHO2Q0JRZ9 810 aa15.24■□□□□ 0.03
DDX54-203ENST00000546869 HECTD3Q5T447 861 aa15.24■□□□□ 0.03
DDX54-203ENST00000546869 KLHDC10Q6PID8 442 aa15.24■□□□□ 0.03
DDX54-203ENST00000546869 TMEM110Q86TL2 294 aa15.24■□□□□ 0.03
DDX54-203ENST00000546869 SLC47A2Q86VL8 602 aa15.24■□□□□ 0.03
DDX54-203ENST00000546869 RSAD2Q8WXG1 361 aa15.24■□□□□ 0.03
DDX54-203ENST00000546869 EDAQ92838 391 aa15.24■□□□□ 0.03
DDX54-203ENST00000546869 RPP25Q9BUL9 199 aaKnown RBP15.24■□□□□ 0.03
DDX54-203ENST00000546869 NUP58Q9BVL2 599 aa15.24■□□□□ 0.03
DDX54-203ENST00000546869 SLC4A5Q9BY07 1137 aa15.24■□□□□ 0.03
DDX54-203ENST00000546869 LRRC4Q9HBW1 653 aa15.24■□□□□ 0.03
DDX54-203ENST00000546869 TRPV5Q9NQA5 729 aa15.24■□□□□ 0.03
DDX54-203ENST00000546869 CNGB3Q9NQW8 809 aa15.24■□□□□ 0.03
DDX54-203ENST00000546869 SLC2A4RGQ9NR83 387 aa15.24■□□□□ 0.03
DDX54-203ENST00000546869 TDP1Q9NUW8 608 aa15.24■□□□□ 0.03
DDX54-203ENST00000546869 DUSP12Q9UNI6 340 aa15.24■□□□□ 0.03
DDX54-203ENST00000546869 A0A0C4DFX4 3053 aa15.23■□□□□ 0.03
DDX54-203ENST00000546869 C2orf78A6NCI8 922 aa15.23■□□□□ 0.03
DDX54-203ENST00000546869 FBXO21O94952 628 aa15.23■□□□□ 0.03
DDX54-203ENST00000546869 CALCAP01258 141 aa15.23■□□□□ 0.03
DDX54-203ENST00000546869 TPM3P06753 285 aa15.23■□□□□ 0.03
DDX54-203ENST00000546869 SRFP11831 508 aa15.23■□□□□ 0.03
DDX54-203ENST00000546869 CDH5P33151 784 aaPredicted RBP15.23■□□□□ 0.03
DDX54-203ENST00000546869 KRT9P35527 623 aa15.23■□□□□ 0.03
DDX54-203ENST00000546869 IFRD2Q12894 506 aaPredicted RBP15.23■□□□□ 0.03
DDX54-203ENST00000546869 DENND1BQ6P3S1 775 aa15.23■□□□□ 0.03
DDX54-203ENST00000546869 WDTC1Q8N5D0 677 aa15.23■□□□□ 0.03
DDX54-203ENST00000546869 IRGQQ8WZA9 623 aa15.23■□□□□ 0.03
DDX54-203ENST00000546869 DDX1Q92499 740 aaKnown RBP15.23■□□□□ 0.03
DDX54-203ENST00000546869 KHSRPQ92945 711 aaKnown RBP eCLIP15.23■□□□□ 0.03
DDX54-203ENST00000546869 USP13Q92995 863 aaPredicted RBP15.23■□□□□ 0.03
DDX54-203ENST00000546869 CYP2S1Q96SQ9 504 aa15.23■□□□□ 0.03
DDX54-203ENST00000546869 CDK5RAP1Q96SZ6 601 aaKnown RBP15.23■□□□□ 0.03
DDX54-203ENST00000546869 PLA2G2FQ9BZM2 168 aa15.23■□□□□ 0.03
DDX54-203ENST00000546869 NLRC4Q9NPP4 1024 aa15.23■□□□□ 0.03
DDX54-203ENST00000546869 GMIPQ9P107 970 aa15.23■□□□□ 0.03
DDX54-203ENST00000546869 ARHGAP26Q9UNA1 814 aa15.23■□□□□ 0.03
DDX54-203ENST00000546869 C5orf42Q9H799 3197 aa15.23■□□□□ 0.03
DDX54-203ENST00000546869 A0A1W2PQJ5 194 aa15.22■□□□□ 0.03
DDX54-203ENST00000546869 HEPACAM2A8MVW5 462 aa15.22■□□□□ 0.03
DDX54-203ENST00000546869 DLL1O00548 723 aa15.22■□□□□ 0.03
DDX54-203ENST00000546869 DPYSL4O14531 572 aa15.22■□□□□ 0.03
DDX54-203ENST00000546869 CBFA2T2O43439 604 aa15.22■□□□□ 0.03
DDX54-203ENST00000546869 GABBR2O75899 941 aa15.22■□□□□ 0.03
DDX54-203ENST00000546869 CCDC172P0C7W6 258 aa15.22■□□□□ 0.03
DDX54-203ENST00000546869 PNMA6AP0CW24 399 aaPredicted RBP15.22■□□□□ 0.03
DDX54-203ENST00000546869 VIPR2P41587 438 aa15.22■□□□□ 0.03
DDX54-203ENST00000546869 SNX16P57768 344 aa15.22■□□□□ 0.03
DDX54-203ENST00000546869 VITQ6UXI7 678 aa15.22■□□□□ 0.03
DDX54-203ENST00000546869 CACNA2D4Q7Z3S7 1137 aa15.22■□□□□ 0.03
DDX54-203ENST00000546869 SCD5Q86SK9 330 aa15.22■□□□□ 0.03
DDX54-203ENST00000546869 TADA2BQ86TJ2 420 aa15.22■□□□□ 0.03
DDX54-203ENST00000546869 ARL14EPQ8N8R7 260 aaPredicted RBP15.22■□□□□ 0.03
DDX54-203ENST00000546869 EPS8L1Q8TE68 723 aa15.22■□□□□ 0.03
DDX54-203ENST00000546869 SLC22A12Q96S37 553 aa15.22■□□□□ 0.03
DDX54-203ENST00000546869 KXD1Q9BQD3 176 aa15.22■□□□□ 0.03
DDX54-203ENST00000546869 TRMT61BQ9BVS5 477 aaKnown RBP15.22■□□□□ 0.03
DDX54-203ENST00000546869 TTYH3Q9C0H2 523 aa15.22■□□□□ 0.03
DDX54-203ENST00000546869 RNF38Q9H0F5 515 aa15.22■□□□□ 0.03
DDX54-203ENST00000546869 TRPC7Q9HCX4 862 aa15.22■□□□□ 0.03
DDX54-203ENST00000546869 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.22■□□□□ 0.03
DDX54-203ENST00000546869 IFNKQ9P0W0 207 aa15.22■□□□□ 0.03
DDX54-203ENST00000546869 WNT16Q9UBV4 365 aa15.22■□□□□ 0.03
DDX54-203ENST00000546869 VCANP13611 3396 aa15.22■□□□□ 0.03
DDX54-203ENST00000546869 CHADO15335 359 aa15.21■□□□□ 0.03
DDX54-203ENST00000546869 SART1O43290 800 aaKnown RBP15.21■□□□□ 0.03
DDX54-203ENST00000546869 COCHO43405 550 aa15.21■□□□□ 0.03
DDX54-203ENST00000546869 GFPT2O94808 682 aa15.21■□□□□ 0.03
DDX54-203ENST00000546869 PRAMEF12O95522 483 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms