RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 GMIPQ9P107 970 aa17.71■□□□□ 0.43
CCDC38-203ENST00000546803 TCF20Q9UGU0 1960 aaKnown RBP17.71■□□□□ 0.43
CCDC38-203ENST00000546803 PI4K2BG5E9Z4 385 aa17.7■□□□□ 0.42
CCDC38-203ENST00000546803 DLL1O00548 723 aa17.7■□□□□ 0.42
CCDC38-203ENST00000546803 DPYSL4O14531 572 aa17.7■□□□□ 0.42
CCDC38-203ENST00000546803 CYP11B1P15538 503 aa17.7■□□□□ 0.42
CCDC38-203ENST00000546803 HDCP19113 662 aa17.7■□□□□ 0.42
CCDC38-203ENST00000546803 KRT9P35527 623 aa17.7■□□□□ 0.42
CCDC38-203ENST00000546803 GPD2P43304 727 aa17.7■□□□□ 0.42
CCDC38-203ENST00000546803 TKTL1P51854 596 aa17.7■□□□□ 0.42
CCDC38-203ENST00000546803 ZNF268Q14587 947 aaPredicted RBP17.7■□□□□ 0.42
CCDC38-203ENST00000546803 HECTD3Q5T447 861 aa17.7■□□□□ 0.42
CCDC38-203ENST00000546803 PM20D1Q6GTS8 502 aa17.7■□□□□ 0.42
CCDC38-203ENST00000546803 DENND1BQ6P3S1 775 aa17.7■□□□□ 0.42
CCDC38-203ENST00000546803 FMNL3Q8IVF7 1028 aa17.7■□□□□ 0.42
CCDC38-203ENST00000546803 SIX6OS1Q8N1H7 587 aa17.7■□□□□ 0.42
CCDC38-203ENST00000546803 SCML4Q8N228 414 aa17.7■□□□□ 0.42
CCDC38-203ENST00000546803 CELF5Q8N6W0 485 aaKnown RBP17.7■□□□□ 0.42
CCDC38-203ENST00000546803 DEPDC1BQ8WUY9 529 aa17.7■□□□□ 0.42
CCDC38-203ENST00000546803 KXD1Q9BQD3 176 aa17.7■□□□□ 0.42
CCDC38-203ENST00000546803 RPP25Q9BUL9 199 aaKnown RBP17.7■□□□□ 0.42
CCDC38-203ENST00000546803 EDEM3Q9BZQ6 932 aa17.7■□□□□ 0.42
CCDC38-203ENST00000546803 CNGB3Q9NQW8 809 aa17.7■□□□□ 0.42
CCDC38-203ENST00000546803 TDP1Q9NUW8 608 aa17.7■□□□□ 0.42
CCDC38-203ENST00000546803 MYO6Q9UM54 1294 aa17.7■□□□□ 0.42
CCDC38-203ENST00000546803 DUSP12Q9UNI6 340 aa17.7■□□□□ 0.42
CCDC38-203ENST00000546803 SPTBN5Q9NRC6 3674 aaKnown RBP17.7■□□□□ 0.42
CCDC38-203ENST00000546803 NOTCH4Q99466 2003 aa17.69■□□□□ 0.42
CCDC38-203ENST00000546803 C2orf78A6NCI8 922 aa17.69■□□□□ 0.42
CCDC38-203ENST00000546803 HEPACAM2A8MVW5 462 aa17.69■□□□□ 0.42
CCDC38-203ENST00000546803 OLFM2O95897 454 aa17.69■□□□□ 0.42
CCDC38-203ENST00000546803 ZBED1O96006 694 aa17.69■□□□□ 0.42
CCDC38-203ENST00000546803 OAS1P00973 400 aaKnown RBP17.69■□□□□ 0.42
CCDC38-203ENST00000546803 CKMP06732 381 aa17.69■□□□□ 0.42
CCDC38-203ENST00000546803 SRFP11831 508 aa17.69■□□□□ 0.42
CCDC38-203ENST00000546803 PSMC3P17980 439 aa17.69■□□□□ 0.42
CCDC38-203ENST00000546803 VIPR2P41587 438 aa17.69■□□□□ 0.42
CCDC38-203ENST00000546803 ACADSBP45954 432 aa17.69■□□□□ 0.42
CCDC38-203ENST00000546803 RPL34P49207 117 aaKnown RBP17.69■□□□□ 0.42
CCDC38-203ENST00000546803 ZXDAP98168 799 aa17.69■□□□□ 0.42
CCDC38-203ENST00000546803 ADIGQ0VDE8 80 aa17.69■□□□□ 0.42
CCDC38-203ENST00000546803 PMF1Q6P1K2 205 aa17.69■□□□□ 0.42
CCDC38-203ENST00000546803 ZNF677Q86XU0 584 aa17.69■□□□□ 0.42
CCDC38-203ENST00000546803 MFSD6LQ8IWD5 586 aa17.69■□□□□ 0.42
CCDC38-203ENST00000546803 ZNF276Q8N554 614 aa17.69■□□□□ 0.42
CCDC38-203ENST00000546803 ARL14EPQ8N8R7 260 aaPredicted RBP17.69■□□□□ 0.42
CCDC38-203ENST00000546803 USP13Q92995 863 aaPredicted RBP17.69■□□□□ 0.42
CCDC38-203ENST00000546803 NUP58Q9BVL2 599 aa17.69■□□□□ 0.42
CCDC38-203ENST00000546803 CYLDQ9NQC7 956 aa17.69■□□□□ 0.42
CCDC38-203ENST00000546803 CLIC5Q9NZA1 410 aa17.69■□□□□ 0.42
CCDC38-203ENST00000546803 IFNKQ9P0W0 207 aa17.69■□□□□ 0.42
CCDC38-203ENST00000546803 ARHGAP26Q9UNA1 814 aa17.69■□□□□ 0.42
CCDC38-203ENST00000546803 CEP83Q9Y592 693 aa17.69■□□□□ 0.42
CCDC38-203ENST00000546803 CBFA2T2O43439 604 aa17.68■□□□□ 0.42
CCDC38-203ENST00000546803 GFPT2O94808 682 aa17.68■□□□□ 0.42
CCDC38-203ENST00000546803 FBXO21O94952 628 aa17.68■□□□□ 0.42
CCDC38-203ENST00000546803 PRAMEF12O95522 483 aa17.68■□□□□ 0.42
CCDC38-203ENST00000546803 CCDC172P0C7W6 258 aa17.68■□□□□ 0.42
CCDC38-203ENST00000546803 PBX1P40424 430 aa17.68■□□□□ 0.42
CCDC38-203ENST00000546803 RGS7P49802 495 aa17.68■□□□□ 0.42
CCDC38-203ENST00000546803 SLC7A9P82251 487 aa17.68■□□□□ 0.42
CCDC38-203ENST00000546803 FIGNQ5HY92 759 aa17.68■□□□□ 0.42
CCDC38-203ENST00000546803 VITQ6UXI7 678 aa17.68■□□□□ 0.42
CCDC38-203ENST00000546803 TADA2BQ86TJ2 420 aa17.68■□□□□ 0.42
CCDC38-203ENST00000546803 ST13P5Q8NFI4 369 aaPredicted RBP17.68■□□□□ 0.42
CCDC38-203ENST00000546803 BPIFB1Q8TDL5 484 aa17.68■□□□□ 0.42
CCDC38-203ENST00000546803 EDAQ92838 391 aa17.68■□□□□ 0.42
CCDC38-203ENST00000546803 KHSRPQ92945 711 aaKnown RBP eCLIP17.68■□□□□ 0.42
CCDC38-203ENST00000546803 IQCDQ96DY2 449 aa17.68■□□□□ 0.42
CCDC38-203ENST00000546803 NOX5Q96PH1 765 aa17.68■□□□□ 0.42
CCDC38-203ENST00000546803 SLC22A12Q96S37 553 aa17.68■□□□□ 0.42
CCDC38-203ENST00000546803 CYP2S1Q96SQ9 504 aa17.68■□□□□ 0.42
CCDC38-203ENST00000546803 CDK5RAP1Q96SZ6 601 aaKnown RBP17.68■□□□□ 0.42
CCDC38-203ENST00000546803 TRMT61BQ9BVS5 477 aaKnown RBP17.68■□□□□ 0.42
CCDC38-203ENST00000546803 SLC4A5Q9BY07 1137 aa17.68■□□□□ 0.42
CCDC38-203ENST00000546803 PLA2G2FQ9BZM2 168 aa17.68■□□□□ 0.42
CCDC38-203ENST00000546803 ULBP1Q9BZM6 244 aa17.68■□□□□ 0.42
CCDC38-203ENST00000546803 PDCL3Q9H2J4 239 aa17.68■□□□□ 0.42
CCDC38-203ENST00000546803 SLC2A4RGQ9NR83 387 aa17.68■□□□□ 0.42
CCDC38-203ENST00000546803 NAGPAQ9UK23 515 aa17.68■□□□□ 0.42
CCDC38-203ENST00000546803 A0A1W2PQH9 124 aa17.67■□□□□ 0.42
CCDC38-203ENST00000546803 SART1O43290 800 aaKnown RBP17.67■□□□□ 0.42
CCDC38-203ENST00000546803 TLR5O60602 858 aa17.67■□□□□ 0.42
CCDC38-203ENST00000546803 CFHP08603 1231 aa17.67■□□□□ 0.42
CCDC38-203ENST00000546803 RALAP11233 206 aa17.67■□□□□ 0.42
CCDC38-203ENST00000546803 TCF3P15923 654 aa17.67■□□□□ 0.42
CCDC38-203ENST00000546803 SNX16P57768 344 aa17.67■□□□□ 0.42
CCDC38-203ENST00000546803 PFKPQ01813 784 aa17.67■□□□□ 0.42
CCDC38-203ENST00000546803 KLHDC10Q6PID8 442 aa17.67■□□□□ 0.42
CCDC38-203ENST00000546803 SCD5Q86SK9 330 aa17.67■□□□□ 0.42
CCDC38-203ENST00000546803 NOP9Q86U38 636 aaKnown RBP17.67■□□□□ 0.42
CCDC38-203ENST00000546803 YAF2Q8IY57 180 aa17.67■□□□□ 0.42
CCDC38-203ENST00000546803 KIAA1958Q8N8K9 716 aa17.67■□□□□ 0.42
CCDC38-203ENST00000546803 TMEM35BQ8NCS4 154 aa17.67■□□□□ 0.42
CCDC38-203ENST00000546803 EPS8L1Q8TE68 723 aa17.67■□□□□ 0.42
CCDC38-203ENST00000546803 IRGQQ8WZA9 623 aa17.67■□□□□ 0.42
CCDC38-203ENST00000546803 DDX1Q92499 740 aaKnown RBP17.67■□□□□ 0.42
CCDC38-203ENST00000546803 RSPRY1Q96DX4 576 aa17.67■□□□□ 0.42
CCDC38-203ENST00000546803 RNF38Q9H0F5 515 aa17.67■□□□□ 0.42
CCDC38-203ENST00000546803 ST7Q9NRC1 585 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms