RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 NME8Q8N427 588 aa12.53□□□□□ -0.4
CCDC38-202ENST00000546386 MDM1Q8TC05 714 aa12.53□□□□□ -0.4
CCDC38-202ENST00000546386 MCRS1Q96EZ8 462 aa12.53□□□□□ -0.4
CCDC38-202ENST00000546386 DHX35Q9H5Z1 703 aaKnown RBP12.53□□□□□ -0.4
CCDC38-202ENST00000546386 VRTNQ9H8Y1 702 aa12.53□□□□□ -0.4
CCDC38-202ENST00000546386 RSAD1Q9HA92 442 aa12.53□□□□□ -0.4
CCDC38-202ENST00000546386 MLXIPLQ9NP71 852 aa12.53□□□□□ -0.4
CCDC38-202ENST00000546386 STRIP2Q9ULQ0 834 aa12.53□□□□□ -0.4
CCDC38-202ENST00000546386 MAGED2Q9UNF1 606 aaPredicted RBP12.53□□□□□ -0.4
CCDC38-202ENST00000546386 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.53□□□□□ -0.4
CCDC38-202ENST00000546386 TCRBV7S3A2A0A539 114 aa12.52□□□□□ -0.4
CCDC38-202ENST00000546386 GPR182O15218 404 aa12.52□□□□□ -0.4
CCDC38-202ENST00000546386 PSTPIP1O43586 416 aa12.52□□□□□ -0.4
CCDC38-202ENST00000546386 ALDH1A1P00352 501 aa12.52□□□□□ -0.4
CCDC38-202ENST00000546386 CAPN2P17655 700 aa12.52□□□□□ -0.4
CCDC38-202ENST00000546386 OR1G1P47890 313 aa12.52□□□□□ -0.4
CCDC38-202ENST00000546386 ZNF844Q08AG5 666 aa12.52□□□□□ -0.4
CCDC38-202ENST00000546386 MGAT3Q09327 533 aa12.52□□□□□ -0.4
CCDC38-202ENST00000546386 KRT71Q3SY84 523 aa12.52□□□□□ -0.4
CCDC38-202ENST00000546386 ANKMY2Q8IV38 441 aa12.52□□□□□ -0.4
CCDC38-202ENST00000546386 TTC16Q8NEE8 873 aa12.52□□□□□ -0.4
CCDC38-202ENST00000546386 EXD1Q8NHP7 514 aa12.52□□□□□ -0.4
CCDC38-202ENST00000546386 CAVIN3Q969G5 261 aa12.52□□□□□ -0.4
CCDC38-202ENST00000546386 TRIM56Q9BRZ2 755 aaKnown RBP12.52□□□□□ -0.4
CCDC38-202ENST00000546386 PLVAPQ9BX97 442 aa12.52□□□□□ -0.4
CCDC38-202ENST00000546386 ETNK2Q9NVF9 386 aa12.52□□□□□ -0.4
CCDC38-202ENST00000546386 PCYOX1Q9UHG3 505 aa12.52□□□□□ -0.4
CCDC38-202ENST00000546386 ATP8B1O43520 1251 aa12.52□□□□□ -0.41
CCDC38-202ENST00000546386 CREB3O43889 395 aa12.52□□□□□ -0.41
CCDC38-202ENST00000546386 PRPSAP2O60256 369 aa12.52□□□□□ -0.41
CCDC38-202ENST00000546386 CAND2O75155 1236 aa12.52□□□□□ -0.41
CCDC38-202ENST00000546386 AVILO75366 819 aa12.52□□□□□ -0.41
CCDC38-202ENST00000546386 TRUB2O95900 331 aaKnown RBP12.52□□□□□ -0.41
CCDC38-202ENST00000546386 TUBBP07437 444 aa12.52□□□□□ -0.41
CCDC38-202ENST00000546386 KCNE1P15382 129 aa12.52□□□□□ -0.41
CCDC38-202ENST00000546386 GRK4P32298 578 aa12.52□□□□□ -0.41
CCDC38-202ENST00000546386 HDAC4P56524 1084 aa12.52□□□□□ -0.41
CCDC38-202ENST00000546386 RNASELQ05823 741 aaKnown RBP12.52□□□□□ -0.41
CCDC38-202ENST00000546386 CALCOCO2Q13137 446 aa12.52□□□□□ -0.41
CCDC38-202ENST00000546386 CUL1Q13616 776 aa12.52□□□□□ -0.41
CCDC38-202ENST00000546386 KRT81Q14533 505 aa12.52□□□□□ -0.41
CCDC38-202ENST00000546386 TCTN1Q2MV58 587 aa12.52□□□□□ -0.41
CCDC38-202ENST00000546386 PKDCCQ504Y2 493 aa12.52□□□□□ -0.41
CCDC38-202ENST00000546386 CYP4V2Q6ZWL3 525 aaPredicted RBP12.52□□□□□ -0.41
CCDC38-202ENST00000546386 DEFB106AQ8N104 65 aa12.52□□□□□ -0.41
CCDC38-202ENST00000546386 LRRC52Q8N7C0 313 aa12.52□□□□□ -0.41
CCDC38-202ENST00000546386 TBCBQ99426 244 aa12.52□□□□□ -0.41
CCDC38-202ENST00000546386 EPB41L4BQ9H329 900 aa12.52□□□□□ -0.41
CCDC38-202ENST00000546386 LRRC19Q9H756 370 aa12.52□□□□□ -0.41
CCDC38-202ENST00000546386 NOVA2Q9UNW9 492 aaKnown RBP12.52□□□□□ -0.41
CCDC38-202ENST00000546386 YJEFN3A6XGL0 299 aa12.51□□□□□ -0.41
CCDC38-202ENST00000546386 E7ENQ6 273 aa12.51□□□□□ -0.41
CCDC38-202ENST00000546386 LIASO43766 372 aa12.51□□□□□ -0.41
CCDC38-202ENST00000546386 AP1G2O75843 785 aa12.51□□□□□ -0.41
CCDC38-202ENST00000546386 SDC4P31431 198 aa12.51□□□□□ -0.41
CCDC38-202ENST00000546386 ZNF143P52747 638 aaPredicted RBP12.51□□□□□ -0.41
CCDC38-202ENST00000546386 PMS2P54278 862 aa12.51□□□□□ -0.41
CCDC38-202ENST00000546386 IFI35P80217 286 aaPredicted RBP12.51□□□□□ -0.41
CCDC38-202ENST00000546386 CDC42EP1Q00587 391 aa12.51□□□□□ -0.41
CCDC38-202ENST00000546386 SLC6A3Q01959 620 aa12.51□□□□□ -0.41
CCDC38-202ENST00000546386 ZNF268Q14587 947 aaPredicted RBP12.51□□□□□ -0.41
CCDC38-202ENST00000546386 SV2CQ496J9 727 aa12.51□□□□□ -0.41
CCDC38-202ENST00000546386 CLEC20AQ6ZU45 233 aa12.51□□□□□ -0.41
CCDC38-202ENST00000546386 CD302Q8IX05 232 aa12.51□□□□□ -0.41
CCDC38-202ENST00000546386 RCOR2Q8IZ40 523 aa12.51□□□□□ -0.41
CCDC38-202ENST00000546386 DBF4BQ8NFT6 615 aa12.51□□□□□ -0.41
CCDC38-202ENST00000546386 SPATA18Q8TC71 538 aa12.51□□□□□ -0.41
CCDC38-202ENST00000546386 HMX1Q9NP08 348 aaPredicted RBP12.51□□□□□ -0.41
CCDC38-202ENST00000546386 AAASQ9NRG9 546 aa12.51□□□□□ -0.41
CCDC38-202ENST00000546386 RASAL2Q9UJF2 1139 aa12.51□□□□□ -0.41
CCDC38-202ENST00000546386 ANAPC5Q9UJX4 755 aa12.51□□□□□ -0.41
CCDC38-202ENST00000546386 TJP3O95049 919 aa12.51□□□□□ -0.41
CCDC38-202ENST00000546386 ATF2P15336 505 aa12.51□□□□□ -0.41
CCDC38-202ENST00000546386 CREB1P16220 341 aa12.51□□□□□ -0.41
CCDC38-202ENST00000546386 IVDP26440 423 aa12.51□□□□□ -0.41
CCDC38-202ENST00000546386 AXLP30530 894 aa12.51□□□□□ -0.41
CCDC38-202ENST00000546386 GPR15P49685 360 aa12.51□□□□□ -0.41
CCDC38-202ENST00000546386 APLP1P51693 650 aa12.51□□□□□ -0.41
CCDC38-202ENST00000546386 TKTL1P51854 596 aa12.51□□□□□ -0.41
CCDC38-202ENST00000546386 DHX34Q14147 1143 aaKnown RBP12.51□□□□□ -0.41
CCDC38-202ENST00000546386 KYAT1Q16773 422 aa12.51□□□□□ -0.41
CCDC38-202ENST00000546386 UPP1Q16831 310 aa12.51□□□□□ -0.41
CCDC38-202ENST00000546386 ANKRD22Q5VYY1 191 aa12.51□□□□□ -0.41
CCDC38-202ENST00000546386 IZUMO3Q5VZ72 239 aa12.51□□□□□ -0.41
CCDC38-202ENST00000546386 APBB1IPQ7Z5R6 666 aaPredicted RBP12.51□□□□□ -0.41
CCDC38-202ENST00000546386 TTC9BQ8N6N2 239 aa12.51□□□□□ -0.41
CCDC38-202ENST00000546386 ANKRD52Q8NB46 1076 aa12.51□□□□□ -0.41
CCDC38-202ENST00000546386 OR10T2Q8NGX3 314 aa12.51□□□□□ -0.41
CCDC38-202ENST00000546386 ATL2Q8NHH9 583 aa12.51□□□□□ -0.41
CCDC38-202ENST00000546386 SNRNP25Q9BV90 132 aaKnown RBP12.51□□□□□ -0.41
CCDC38-202ENST00000546386 ANLNQ9NQW6 1124 aa12.51□□□□□ -0.41
CCDC38-202ENST00000546386 ATP8B3O60423 1300 aa12.51□□□□□ -0.41
CCDC38-202ENST00000546386 SPEGQ15772 3267 aa12.5□□□□□ -0.41
CCDC38-202ENST00000546386 MNX1P50219 401 aaPredicted RBP12.5□□□□□ -0.41
CCDC38-202ENST00000546386 HADHQ16836 314 aaKnown RBP12.5□□□□□ -0.41
CCDC38-202ENST00000546386 FAM71BQ8TC56 605 aa12.5□□□□□ -0.41
CCDC38-202ENST00000546386 LINC01599Q8WXQ3 324 aa12.5□□□□□ -0.41
CCDC38-202ENST00000546386 ZNF560Q96MR9 790 aa12.5□□□□□ -0.41
CCDC38-202ENST00000546386 SYT15Q9BQS2 421 aa12.5□□□□□ -0.41
CCDC38-202ENST00000546386 MAK16Q9BXY0 300 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms